NP-MRD: Showing NP-Card for (3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one (NP0142702)

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Record Information

Version

2.0

Created at

2022-09-01 21:18:19 UTC

Updated at

2022-09-01 21:18:19 UTC

NP-MRD ID

NP0142702

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one

Description

SPONGIADIOL belongs to the class of organic compounds known as isocopalane and spongiane diterpenoids. These are diterpenoids with a structure based on the isocopalane (Tetradecahydro-1,1,4a,7,8,8a-hexamethylphenanthrene) or the 15,16-epoxyisocopalane skeleton. (3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one is found in Doriprismatica atromarginata and Rhopaloeides odorabile. (3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one was first documented in 2009 (PMID: 19346615). Based on a literature review very few articles have been published on SPONGIADIOL.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309012223182D          

 24 27  0  0  1  0            999 V2000
    1.8641    0.3651    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5776   -0.0491    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8616    0.7255    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3328    1.3587    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0458   -0.6798    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2336   -0.5346    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3261   -1.4557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7942   -2.0864    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1382   -1.6009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6700   -0.9702    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9503   -1.7461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3897   -0.1943    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9215    0.4364    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7336    0.2912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0139   -0.4847    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.5458    0.1460    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8261   -0.6299    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4774   -0.1236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1602   -0.5866    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9309   -1.3791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1064   -1.4059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5745   -2.0366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7624   -1.8914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4821   -1.1154    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  6  0  0  0
  3  4  1  0  0  0  0
  2  5  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  6  0  0  0
 10 12  1  0  0  0  0
  2 12  1  0  0  0  0
 12 13  1  6  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  6  0  0  0
 15 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 17 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 24 23  1  6  0  0  0
 15 24  1  0  0  0  0
 10 24  1  0  0  0  0
M  END

     RDKit          3D

 52 55  0  0  0  0  0  0  0  0999 V2000
   -3.4058   -0.0604   -1.3651 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5415   -0.2734   -0.1055 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.9999   -1.6104    0.4249 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3726   -1.5175    0.7161 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9833    0.8351    0.8407 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.3219    1.2078    0.5658 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1762    2.0610    0.6957 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6695    3.1375    0.9860 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7681    2.0823    0.2087 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2536    0.6435    0.4415 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3114    0.4063    1.8856 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0960   -0.2176   -0.4455 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4800   -1.5662   -0.7332 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8390   -1.3518   -1.4377 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7474   -0.6448   -0.4101 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8896   -1.5987    0.7220 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1027   -0.4660   -0.9883 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8190   -1.0387   -2.0165 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0142   -0.4644   -2.0671 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1329    0.4501   -1.1391 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9295    0.4752   -0.4317 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4394    1.2713    0.7049 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0082    1.7013    0.5297 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1556    0.6712   -0.1588 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.1882   -0.9547   -2.0009 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1754    0.8840   -1.8589 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4503   -0.1730   -1.0304 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9163   -2.4100   -0.3397 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5057   -1.9532    1.3217 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5805   -2.2636    1.3352 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0190    0.4499    1.8918 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9613    0.7158    1.1055 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1464    2.8034    0.7684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7470    2.2972   -0.8680 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8197   -0.5142    2.2235 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8279    1.2325    2.4662 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7028    0.3788    2.3580 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0340    0.2984   -1.4581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4673   -2.2601    0.0923 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1535   -2.0325   -1.5143 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6528   -0.5831   -2.2277 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2916   -2.2687   -1.8105 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1075   -2.6090    0.2525 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7764   -1.4243    1.3726 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0324   -1.7626    1.3611 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4514   -1.8367   -2.6772 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9848    1.0817   -0.9331 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5922    0.7989    1.6967 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0849    2.1990    0.7465 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6211    1.9861    1.5300 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0416    2.6826   -0.0330 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9555    1.1048   -1.1933 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  6
  2  3  1  0
  3  4  1  0
  2  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  2  0
  7  9  1  0
  9 10  1  0
 10 11  1  1
 10 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  1
 15 24  1  0
 24 23  1  0
 23 22  1  0
 22 21  1  0
 21 20  2  0
 20 19  1  0
 19 18  1  0
 18 17  2  0
 12  2  1  0
 17 15  1  0
 24 10  1  0
 17 21  1  0
  1 25  1  0
  1 26  1  0
  1 27  1  0
  3 28  1  0
  3 29  1  0
  4 30  1  0
  5 31  1  1
  6 32  1  0
  9 33  1  0
  9 34  1  0
 11 35  1  0
 11 36  1  0
 11 37  1  0
 12 38  1  6
 13 39  1  0
 13 40  1  0
 14 41  1  0
 14 42  1  0
 16 43  1  0
 16 44  1  0
 16 45  1  0
 24 52  1  6
 23 50  1  0
 23 51  1  0
 22 48  1  0
 22 49  1  0
 20 47  1  0
 18 46  1  0
M  END


  Mrv1652309012223182D          

 24 27  0  0  1  0            999 V2000
    1.8641    0.3651    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5776   -0.0491    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8616    0.7255    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3328    1.3587    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0458   -0.6798    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2336   -0.5346    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3261   -1.4557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7942   -2.0864    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1382   -1.6009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6700   -0.9702    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9503   -1.7461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3897   -0.1943    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9215    0.4364    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7336    0.2912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0139   -0.4847    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.5458    0.1460    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8261   -0.6299    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4774   -0.1236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1602   -0.5866    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9309   -1.3791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1064   -1.4059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5745   -2.0366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7624   -1.8914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4821   -1.1154    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  6  0  0  0
  3  4  1  0  0  0  0
  2  5  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  6  0  0  0
 10 12  1  0  0  0  0
  2 12  1  0  0  0  0
 12 13  1  6  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  6  0  0  0
 15 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 17 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 24 23  1  6  0  0  0
 15 24  1  0  0  0  0
 10 24  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0142702

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@]1(CO)[C@H](O)C(=O)C[C@@]2(C)[C@H]1CC[C@]1(C)[C@@H]2CCC2=COC=C12

> <INCHI_IDENTIFIER>
InChI=1S/C20H28O4/c1-18-7-6-16-19(2,8-14(22)17(23)20(16,3)11-21)15(18)5-4-12-9-24-10-13(12)18/h9-10,15-17,21,23H,4-8,11H2,1-3H3/t15-,16+,17+,18-,19+,20+/m0/s1

> <INCHI_KEY>
LSLWLOMYKHFTQT-IEJRGFGGSA-N

> <FORMULA>
C20H28O4

> <MOLECULAR_WEIGHT>
332.44

> <EXACT_MASS>
332.198759382

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
52

> <JCHEM_AVERAGE_POLARIZABILITY>
36.702546680342714

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2R,5S,6S,7R,10R)-5-hydroxy-6-(hydroxymethyl)-2,6,10-trimethyl-13-oxatetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-11,14-dien-4-one

> <ALOGPS_LOGP>
2.64

> <JCHEM_LOGP>
2.5766578959999995

> <ALOGPS_LOGS>
-3.90

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.111774237034293

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.893294558541992

> <JCHEM_PKA_STRONGEST_BASIC>
-2.7164947695943784

> <JCHEM_POLAR_SURFACE_AREA>
70.67

> <JCHEM_REFRACTIVITY>
90.77579999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.20e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,5S,6S,7R,10R)-5-hydroxy-6-(hydroxymethyl)-2,6,10-trimethyl-13-oxatetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-11,14-dien-4-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 01-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   01-SEP-22         0                                  
HETATM    1  C   UNK     0       3.480   0.682   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.811  -0.092   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.342   1.354   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       4.355   2.536   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       3.819  -1.269   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       2.303  -0.998   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       4.342  -2.717   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       3.349  -3.895   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       5.858  -2.988   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.851  -1.811   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       7.374  -3.259   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.327  -0.363   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       7.320   0.815   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       8.836   0.544   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       9.359  -0.905   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.352   0.273   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      10.875  -1.176   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      12.091  -0.231   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      13.366  -1.095   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      12.938  -2.574   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      11.399  -2.624   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      10.406  -3.802   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       8.890  -3.531   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       8.367  -2.082   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    5   12                                             
CONECT    3    2    4                                                       
CONECT    4    3                                                            
CONECT    5    2    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   11   12   24                                             
CONECT   11   10                                                            
CONECT   12   10    2   13                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   17   24                                             
CONECT   16   15                                                            
CONECT   17   15   18   21                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   17   22                                                  
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   15   10                                                  
MASTER        0    0    0    0    0    0    0    0   24    0   54    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₂₈O₄

Average Mass

332.4400 Da

Monoisotopic Mass

332.19876 Da

IUPAC Name

(1R,2R,5S,6S,7R,10R)-5-hydroxy-6-(hydroxymethyl)-2,6,10-trimethyl-13-oxatetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-11,14-dien-4-one

Traditional Name

(1R,2R,5S,6S,7R,10R)-5-hydroxy-6-(hydroxymethyl)-2,6,10-trimethyl-13-oxatetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-11,14-dien-4-one

CAS Registry Number

Not Available

SMILES

C[C@]1(CO)[C@H](O)C(=O)C[C@@]2(C)[C@H]1CC[C@]1(C)[C@@H]2CCC2=COC=C12

InChI Identifier

InChI=1S/C20H28O4/c1-18-7-6-16-19(2,8-14(22)17(23)20(16,3)11-21)15(18)5-4-12-9-24-10-13(12)18/h9-10,15-17,21,23H,4-8,11H2,1-3H3/t15-,16+,17+,18-,19+,20+/m0/s1

InChI Key

LSLWLOMYKHFTQT-IEJRGFGGSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Doriprismatica atromarginata	LOTUS Database	35616633
Rhopaloeides odorabile	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as isocopalane and spongiane diterpenoids. These are diterpenoids with a structure based on the isocopalane (Tetradecahydro-1,1,4a,7,8,8a-hexamethylphenanthrene) or the 15,16-epoxyisocopalane skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Isocopalane and spongiane diterpenoids

Alternative Parents

Substituents

Spongiane diterpenoid
12-oxosteroid
Oxosteroid
Steroid
Cyclic alcohol
Furan
Heteroaromatic compound
Ketone
Cyclic ketone
Secondary alcohol
Oxacycle
Organoheterocyclic compound
Organooxygen compound
Alcohol
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Carbonyl group
Primary alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.64	ALOGPS
logP	2.58	ChemAxon
logS	-3.9	ALOGPS
pKa (Strongest Acidic)	12.89	ChemAxon
pKa (Strongest Basic)	-2.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	70.67 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	90.78 m³·mol⁻¹	ChemAxon
Polarizability	36.7 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

10272800

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

13855380

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Yong KW, Garson MJ, Bernhardt PV: Absolute structures and conformations of the spongian diterpenes spongia-13(16),14-dien-3-one, epispongiadiol and spongiadiol. Acta Crystallogr C. 2009 Apr;65(Pt 4):o167-70. doi: 10.1107/S0108270109008816. Epub 2009 Mar 25. [PubMed:19346615 ]
LOTUS database [Link]

Showing NP-Card for (3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one (NP0142702)

MOL for NP0142702 ((3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one)

3D MOL for NP0142702 ((3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one)

3D SDF for NP0142702 ((3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one)

3D-SDF for NP0142702 ((3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one)

PDB for NP0142702 ((3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one)

3D PDB for NP0142702 ((3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one)

SMILES for NP0142702 ((3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one)

INCHI for NP0142702 ((3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one)

Structure for NP0142702 ((3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one)

3D Structure for NP0142702 ((3br,5ar,6s,7s,9ar,9br)-7-hydroxy-6-(hydroxymethyl)-3b,6,9a-trimethyl-4h,5h,5ah,7h,9h,9bh,10h,11h-phenanthro[1,2-c]furan-8-one)