NP-MRD: Showing NP-Card for (1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate (NP0142380)

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Record Information

Version

2.0

Created at

2022-09-01 20:54:48 UTC

Updated at

2022-09-01 20:54:48 UTC

NP-MRD ID

NP0142380

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate

Description

(1S,7R,10R,11Z,14R,16S)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]Heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate belongs to the class of organic compounds known as tetracarboxylic acids and derivatives. These are carboxylic acids containing exactly four carboxyl groups. (1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate is found in Vernonia brachycalyx. Based on a literature review very few articles have been published on (1S,7R,10R,11Z,14R,16S)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]Heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309012222542D          

 35 38  0  0  1  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1652309012222542D          

 35 38  0  0  1  0            999 V2000
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 21 35  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0142380

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C\C=C1/C(=O)O[C@]2(C)C[C@H](OC(=O)C(=C)COC(C)=O)[C@]34O[C@]12CC[C@@](C)(O)\C=C3\OC(=O)C4=C

> <INCHI_IDENTIFIER>
InChI=1S/C25H28O10/c1-7-16-21(29)34-23(6)11-18(32-19(27)13(2)12-31-15(4)26)25-14(3)20(28)33-17(25)10-22(5,30)8-9-24(16,23)35-25/h7,10,18,30H,2-3,8-9,11-12H2,1,4-6H3/b16-7+,17-10+/t18-,22+,23+,24+,25+/m0/s1

> <INCHI_KEY>
FMTQGRCNHLUNDD-SNDRTCFLSA-N

> <FORMULA>
C25H28O10

> <MOLECULAR_WEIGHT>
488.489

> <EXACT_MASS>
488.168247102

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
63

> <JCHEM_AVERAGE_POLARIZABILITY>
48.46858058917047

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1S,5E,7R,10R,11Z,14R,16S)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0^{1,5}.0^{10,14}]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate

> <ALOGPS_LOGP>
1.83

> <JCHEM_LOGP>
1.8835792276666654

> <ALOGPS_LOGS>
-3.95

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.548506266916565

> <JCHEM_PKA_STRONGEST_BASIC>
-2.996283358850693

> <JCHEM_POLAR_SURFACE_AREA>
134.66

> <JCHEM_REFRACTIVITY>
120.03969999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
5.43e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,5E,7R,10R,11Z,14R,16S)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0^{1,5}.0^{10,14}]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 01-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   01-SEP-22         0                                  
HETATM    1  C   UNK     0       7.666  -5.013   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.666  -6.553   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.332  -7.323   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       4.999  -6.553   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       3.665  -7.323   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.331  -6.553   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       3.665  -8.863   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       9.000  -7.323   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       9.000  -8.863   0.000  0.00  0.00           O+0
HETATM   10  O   UNK     0      10.333  -6.553   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0      11.667  -7.323   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      13.003  -6.472   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      14.432  -7.258   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      14.514  -5.720   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      15.894  -6.647   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      16.902  -7.821   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      18.437  -7.702   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      16.085  -9.137   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      16.732 -10.534   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      18.266 -10.674   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      14.518  -8.901   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      14.610 -10.545   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      13.771 -11.922   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      12.172 -12.177   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      12.739 -13.609   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      10.897 -13.042   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      10.910 -10.987   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      10.341  -9.466   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       9.323 -10.673   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0      10.427 -11.755   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0      10.360 -13.294   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      11.855 -10.582   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      13.292 -11.134   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      11.599  -8.892   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      13.189  -8.941   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    8                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5                                                            
CONECT    8    2    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10   12   34                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   15   21                                             
CONECT   14   13                                                            
CONECT   15   13   16                                                       
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19   21                                                  
CONECT   19   18   20                                                       
CONECT   20   19                                                            
CONECT   21   18   13   22   35                                             
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25   26   27                                             
CONECT   25   24                                                            
CONECT   26   24                                                            
CONECT   27   24   28                                                       
CONECT   28   27   29   34                                                  
CONECT   29   28   30                                                       
CONECT   30   29   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30   33   34                                                  
CONECT   33   32                                                            
CONECT   34   32   28   11   35                                             
CONECT   35   34   21                                                       
MASTER        0    0    0    0    0    0    0    0   35    0   76    0
END

View in JSmol

Synonyms

Value	Source
(1S,7R,10R,11Z,14R,16S)-11-Ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0,.0,]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoic acid	Generator

Chemical Formula

C₂₅H₂₈O₁₀

Average Mass

488.4890 Da

Monoisotopic Mass

488.16825 Da

IUPAC Name

(1S,5E,7R,10R,11Z,14R,16S)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0^{1,5}.0^{10,14}]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate

Traditional Name

(1S,5E,7R,10R,11Z,14R,16S)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0^{1,5}.0^{10,14}]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate

CAS Registry Number

Not Available

SMILES

C\C=C1/C(=O)O[C@]2(C)C[C@H](OC(=O)C(=C)COC(C)=O)[C@]34O[C@]12CC[C@@](C)(O)\C=C3\OC(=O)C4=C

InChI Identifier

InChI=1S/C25H28O10/c1-7-16-21(29)34-23(6)11-18(32-19(27)13(2)12-31-15(4)26)25-14(3)20(28)33-17(25)10-22(5,30)8-9-24(16,23)35-25/h7,10,18,30H,2-3,8-9,11-12H2,1,4-6H3/b16-7+,17-10+/t18-,22+,23+,24+,25+/m0/s1

InChI Key

FMTQGRCNHLUNDD-SNDRTCFLSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Vernonia brachycalyx	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as tetracarboxylic acids and derivatives. These are carboxylic acids containing exactly four carboxyl groups.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Tetracarboxylic acids and derivatives

Direct Parent

Tetracarboxylic acids and derivatives

Alternative Parents

Substituents

Tetracarboxylic acid or derivatives
Furopyran
Gamma butyrolactone
Pyran
Oxane
Monosaccharide
Enol ester
Furan
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Tetrahydrofuran
Tertiary alcohol
Carboxylic acid ester
Lactone
Dialkyl ether
Ether
Oxacycle
Organoheterocyclic compound
Organic oxide
Alcohol
Hydrocarbon derivative
Carbonyl group
Organic oxygen compound
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.83	ALOGPS
logP	1.88	ChemAxon
logS	-4	ALOGPS
pKa (Strongest Acidic)	14.55	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	134.66 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	120.04 m³·mol⁻¹	ChemAxon
Polarizability	48.47 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163190852

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate (NP0142380)

MOL for NP0142380 ((1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate)

3D MOL for NP0142380 ((1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate)

3D SDF for NP0142380 ((1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate)

3D-SDF for NP0142380 ((1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate)

PDB for NP0142380 ((1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate)

3D PDB for NP0142380 ((1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate)

SMILES for NP0142380 ((1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate)

INCHI for NP0142380 ((1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate)

Structure for NP0142380 ((1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate)

3D Structure for NP0142380 ((1s,5e,7r,10r,11z,14r,16s)-11-ethylidene-7-hydroxy-7,14-dimethyl-2-methylidene-3,12-dioxo-4,13,17-trioxatetracyclo[8.6.1.0¹,⁵.0¹⁰,¹⁴]heptadec-5-en-16-yl 2-[(acetyloxy)methyl]prop-2-enoate)