NP-MRD: Showing NP-Card for 3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester (NP0137691)

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Record Information

Version

2.0

Created at

2022-05-31 16:03:38 UTC

Updated at

2022-05-31 16:03:38 UTC

NP-MRD ID

NP0137691

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester

Description

3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Based on a literature review very few articles have been published on 3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652305312218032D          

 41 45  0  0  1  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1652305312218032D          

 41 45  0  0  1  0            999 V2000
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    6.8378   -5.1437    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2611   -4.4355    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0129   -5.1311    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7838   -5.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8573   -5.9413    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1880   -5.1186    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.5896   -5.8392    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7647   -5.8267    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9398   -5.8141    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5382   -5.0935    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.6119   -5.9152    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4868   -4.3477    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8884   -5.0684    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5685   -5.7158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8925   -6.4745    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2506   -5.6171    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7456   -6.2771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1279   -2.9220    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5233   -2.3607    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9163   -2.6790    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  9 10  1  0  0  0  0
  8 11  1  0  0  0  0
 11 12  1  6  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  1  0  0  0
 15 17  1  0  0  0  0
 17 18  1  6  0  0  0
 17 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 21 24  1  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 24 27  1  0  0  0  0
 17 27  1  0  0  0  0
 27 28  1  1  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
  8 31  1  0  0  0  0
 15 31  1  0  0  0  0
 31 32  1  6  0  0  0
 11 33  1  0  0  0  0
  2 33  1  0  0  0  0
  5 33  1  0  0  0  0
 33 34  1  1  0  0  0
  5 35  1  6  0  0  0
 35 36  2  0  0  0  0
 35 37  1  0  0  0  0
 37 38  1  0  0  0  0
  2 39  1  1  0  0  0
 39 40  1  0  0  0  0
 39 41  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0137691

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H][C@]1(CC[C@@]2(CC[C@]3(CO)[C@]([H])(CC[C@]4([H])[C@@]5(C)CCC([H])(O)C(C)(C)[C@]5([H])CC[C@@]34C)[C@@]12[H])C(=O)OC)C(C)=C

> <INCHI_IDENTIFIER>
InChI=1S/C31H50O4/c1-19(2)20-10-15-30(26(34)35-7)16-17-31(18-32)21(25(20)30)8-9-23-28(5)13-12-24(33)27(3,4)22(28)11-14-29(23,31)6/h20-25,32-33H,1,8-18H2,2-7H3/t20-,21+,22-,23+,24?,25+,28-,29+,30-,31-/m0/s1

> <INCHI_KEY>
UEBDDJDCLTYODS-POXQFGHCSA-N

> <FORMULA>
C31H50O4

> <MOLECULAR_WEIGHT>
486.737

> <EXACT_MASS>
486.37091009

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
85

> <JCHEM_AVERAGE_POLARIZABILITY>
57.407137464413694

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
methyl (1R,2S,5S,8R,9R,10R,13R,14R,19R)-17-hydroxy-2-(hydroxymethyl)-1,14,18,18-tetramethyl-8-(prop-1-en-2-yl)pentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicosane-5-carboxylate

> <JCHEM_LOGP>
5.504861979333334

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
19.660957476394625

> <JCHEM_PKA_STRONGEST_ACIDIC>
19.4894333901713

> <JCHEM_PKA_STRONGEST_BASIC>
-0.4949613568306316

> <JCHEM_POLAR_SURFACE_AREA>
66.76

> <JCHEM_REFRACTIVITY>
139.1693

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
methyl (1R,2S,5S,8R,9R,10R,13R,14R,19R)-17-hydroxy-2-(hydroxymethyl)-1,14,18,18-tetramethyl-8-(prop-1-en-2-yl)pentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicosane-5-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 31-MAY-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   31-MAY-22         0                                  
HETATM    1  H   UNK     0       3.256  -6.580   0.000  0.00  0.00           H+0
HETATM    2  C   UNK     0       1.762  -6.956   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.346  -7.561   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.484  -9.094   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.985  -9.438   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.735 -10.783   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       4.275 -10.806   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.065  -9.484   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.814 -10.830   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       5.024 -12.151   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       4.315  -8.139   0.000  0.00  0.00           C+0
HETATM   12  H   UNK     0       3.566  -6.794   0.000  0.00  0.00           H+0
HETATM   13  C   UNK     0       5.105  -6.817   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.645  -6.841   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       7.395  -8.186   0.000  0.00  0.00           C+0
HETATM   16  H   UNK     0       8.144  -9.531   0.000  0.00  0.00           H+0
HETATM   17  C   UNK     0       8.935  -8.209   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.185  -6.864   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       9.725  -6.888   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      11.265  -6.911   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      12.014  -8.256   0.000  0.00  0.00           C+0
HETATM   22  H   UNK     0      12.764  -9.601   0.000  0.00  0.00           H+0
HETATM   23  O   UNK     0      13.554  -8.280   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      11.224  -9.578   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      12.663 -10.127   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      10.934 -11.090   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       9.684  -9.555   0.000  0.00  0.00           C+0
HETATM   28  H   UNK     0      10.434 -10.900   0.000  0.00  0.00           H+0
HETATM   29  C   UNK     0       8.894 -10.876   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       7.354 -10.853   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       6.605  -9.508   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       6.742 -11.042   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       2.775  -8.116   0.000  0.00  0.00           C+0
HETATM   34  H   UNK     0       3.525  -9.461   0.000  0.00  0.00           H+0
HETATM   35  C   UNK     0       1.061 -10.670   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0       1.666 -12.086   0.000  0.00  0.00           O+0
HETATM   37  O   UNK     0      -0.468 -10.485   0.000  0.00  0.00           O+0
HETATM   38  C   UNK     0      -1.392 -11.717   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0       2.105  -5.454   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0       0.977  -4.407   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0       3.577  -5.001   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   33   39                                             
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6   33   35                                             
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   11   31                                             
CONECT    9    8   10                                                       
CONECT   10    9                                                            
CONECT   11    8   12   13   33                                             
CONECT   12   11                                                            
CONECT   13   11   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   17   31                                             
CONECT   16   15                                                            
CONECT   17   15   18   19   27                                             
CONECT   18   17                                                            
CONECT   19   17   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22   23   24                                             
CONECT   22   21                                                            
CONECT   23   21                                                            
CONECT   24   21   25   26   27                                             
CONECT   25   24                                                            
CONECT   26   24                                                            
CONECT   27   24   17   28   29                                             
CONECT   28   27                                                            
CONECT   29   27   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30    8   15   32                                             
CONECT   32   31                                                            
CONECT   33   11    2    5   34                                             
CONECT   34   33                                                            
CONECT   35    5   36   37                                                  
CONECT   36   35                                                            
CONECT   37   35   38                                                       
CONECT   38   37                                                            
CONECT   39    2   40   41                                                  
CONECT   40   39                                                            
CONECT   41   39                                                            
MASTER        0    0    0    0    0    0    0    0   41    0   90    0
END

View in JSmol

Synonyms

Value	Source
3,27-Dihydroxy-20(29)-lupen-28-Oate methyl ester	Generator

Chemical Formula

C₃₁H₅₀O₄

Average Mass

486.7370 Da

Monoisotopic Mass

486.37091 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

263844-79-7

SMILES

[H][C@]1(CC[C@@]2(CC[C@]3(CO)[C@]([H])(CC[C@]4([H])[C@@]5(C)CCC([H])(O)C(C)(C)[C@]5([H])CC[C@@]34C)[C@@]12[H])C(=O)OC)C(C)=C

InChI Identifier

InChI=1S/C31H50O4/c1-19(2)20-10-15-30(26(34)35-7)16-17-31(18-32)21(25(20)30)8-9-23-28(5)13-12-24(33)27(3,4)22(28)11-14-29(23,31)6/h20-25,32-33H,1,8-18H2,2-7H3/t20-,21+,22-,23+,24?,25+,28-,29+,30-,31-/m0/s1

InChI Key

UEBDDJDCLTYODS-POXQFGHCSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Triterpenoids

Alternative Parents

Substituents

Triterpenoid
18-oxosteroid
Oxosteroid
Steroid
Methyl ester
Cyclic alcohol
Secondary alcohol
Carboxylic acid ester
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

29365021

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

71307351

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for 3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester (NP0137691)

MOL for NP0137691 (3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester)

3D MOL for NP0137691 (3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester)

3D SDF for NP0137691 (3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester)

3D-SDF for NP0137691 (3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester)

PDB for NP0137691 (3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester)

3D PDB for NP0137691 (3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester)

SMILES for NP0137691 (3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester)

INCHI for NP0137691 (3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester)

Structure for NP0137691 (3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester)

3D Structure for NP0137691 (3,27-Dihydroxy-20(29)-lupen-28-oic acid methyl ester)