NP-MRD: Showing NP-Card for Sativanone (NP0137076)

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Record Information

Version

2.0

Created at

2022-05-30 16:40:58 UTC

Updated at

2022-05-30 16:40:59 UTC

NP-MRD ID

NP0137076

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Sativanone

Description

Sativanone belongs to the class of organic compounds known as 4'-o-methylated isoflavonoids. These are isoflavonoids with methoxy groups attached to the C4' atom of the isoflavonoid backbone. Isoflavonoids are natural products derived from 3-phenylchromen-4-one. Thus, sativanone is considered to be a flavonoid lipid molecule. Sativanone is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral. Outside of the human body, Sativanone has been detected, but not quantified in, alfalfa and pulses. Sativanone is found in Dalbergia odorifera and Dalbergia parviflora. This could make sativanone a potential biomarker for the consumption of these foods.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 38 40  0  0  0  0  0  0  0  0999 V2000
    5.9393   -0.3361   -0.1858 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0562   -0.4527    0.8866 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6907   -0.2188    0.8333 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9734   -0.3883    2.0150 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6134   -0.1567    1.9674 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9961    0.2264    0.7952 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4548    0.4564    0.8129 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.0598    0.2481    2.1826 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4335    0.6202    2.1056 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2808    0.1283    1.1063 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6500    0.1639    1.2390 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4502   -0.3303    0.2330 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8578   -0.3000    0.3560 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8670   -0.8564   -0.8983 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4956   -0.8778   -1.0010 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6582   -0.3943   -0.0192 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2040   -0.4142   -0.1222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6828   -1.1610   -0.9888 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7039    0.3941   -0.3725 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0221    0.7778   -1.5033 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6850    0.9666   -2.7284 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0710    0.1644   -0.3377 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0987   -1.3140   -0.7233 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6480    0.4252   -0.9123 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9728   -0.0499    0.1589 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4652   -0.6883    2.9274 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0644   -0.2914    2.8923 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6858    1.5139    0.5243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0237   -0.8120    2.5009 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5698    0.9366    2.8986 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1190    0.5802    2.1343 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2875    0.5542   -0.0098 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4766   -1.2490   -1.6985 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9852   -1.2874   -1.8843 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2402    1.9278   -2.7029 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9451    1.0411   -3.5538 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4148    0.1642   -2.9411 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6420    0.2895   -1.2380 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3 22  2  0
 22 19  1  0
 19 20  1  0
 20 21  1  0
 19  6  2  0
  6  5  1  0
  5  4  2  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 16  2  0
 16 15  1  0
 15 14  2  0
 14 12  1  0
 12 13  1  0
 12 11  2  0
 16 17  1  0
 17 18  2  0
  4  3  1  0
 17  7  1  0
 11 10  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
 22 38  1  0
 21 35  1  0
 21 36  1  0
 21 37  1  0
  5 27  1  0
  4 26  1  0
  7 28  1  6
  8 29  1  0
  8 30  1  0
 15 34  1  0
 14 33  1  0
 13 32  1  0
 11 31  1  0
M  END

  Mrv0541 05061310142D          

 22 24  0  0  0  0            999 V2000
    7.1447    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  5  3  2  0  0  0  0
  6  4  2  0  0  0  0
 10  3  1  0  0  0  0
 10  7  2  0  0  0  0
 11  4  1  0  0  0  0
 11  8  2  0  0  0  0
 12  6  1  0  0  0  0
 13  5  1  0  0  0  0
 14  9  1  0  0  0  0
 14 12  1  0  0  0  0
 15  8  1  0  0  0  0
 15 12  2  0  0  0  0
 16  7  1  0  0  0  0
 16 13  2  0  0  0  0
 17 13  1  0  0  0  0
 17 14  1  0  0  0  0
 18 10  1  0  0  0  0
 19 17  2  0  0  0  0
 20  1  1  0  0  0  0
 20 11  1  0  0  0  0
 21  2  1  0  0  0  0
 21 15  1  0  0  0  0
 22  9  1  0  0  0  0
 22 16  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0137076

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC(OC)=C(C=C1)C1COC2=C(C=CC(O)=C2)C1=O

> <INCHI_IDENTIFIER>
InChI=1S/C17H16O5/c1-20-11-4-6-12(15(8-11)21-2)14-9-22-16-7-10(18)3-5-13(16)17(14)19/h3-8,14,18H,9H2,1-2H3

> <INCHI_KEY>
JOVYBWHPTQRVNZ-UHFFFAOYSA-N

> <FORMULA>
C17H16O5

> <MOLECULAR_WEIGHT>
300.3059

> <EXACT_MASS>
300.099773622

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_AVERAGE_POLARIZABILITY>
30.735629077328703

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3-(2,4-dimethoxyphenyl)-7-hydroxy-3,4-dihydro-2H-1-benzopyran-4-one

> <ALOGPS_LOGP>
2.52

> <JCHEM_LOGP>
2.369446226

> <ALOGPS_LOGS>
-3.82

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.36473170216587

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.783375169505194

> <JCHEM_PKA_STRONGEST_BASIC>
-4.385788814558863

> <JCHEM_POLAR_SURFACE_AREA>
64.99000000000001

> <JCHEM_REFRACTIVITY>
80.64110000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.52e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
sativanone

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0      13.337   6.160   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       8.002   1.540   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       9.336   6.930   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.667   4.620   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       8.002   6.160   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      10.669   4.620   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.668   2.310   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      10.669   6.160   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       8.002   4.620   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.001   3.850   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.668   3.850   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       9.336   3.850   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.001   2.310   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.335   4.620   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       0.000   1.540   0.000  0.00  0.00           O+0
HETATM   19  O   UNK     0       5.335   6.160   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0      12.003   6.930   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0       9.336   2.310   0.000  0.00  0.00           O+0
HETATM   22  O   UNK     0       5.335   1.540   0.000  0.00  0.00           O+0
CONECT    1   20                                                            
CONECT    2   21                                                            
CONECT    3    5   10                                                       
CONECT    4    6   11                                                       
CONECT    5    3   13                                                       
CONECT    6    4   12                                                       
CONECT    7   10   16                                                       
CONECT    8   11   15                                                       
CONECT    9   14   22                                                       
CONECT   10    3    7   18                                                  
CONECT   11    4    8   20                                                  
CONECT   12    6   14   15                                                  
CONECT   13    5   16   17                                                  
CONECT   14    9   12   17                                                  
CONECT   15    8   12   21                                                  
CONECT   16    7   13   22                                                  
CONECT   17   13   14   19                                                  
CONECT   18   10                                                            
CONECT   19   17                                                            
CONECT   20    1   11                                                       
CONECT   21    2   15                                                       
CONECT   22    9   16                                                       
MASTER        0    0    0    0    0    0    0    0   22    0   48    0
END

View in JSmol

Synonyms

Value	Source
7-Hydroxy-2',4'-dimethoxyisoflavanone	HMDB

Chemical Formula

C₁₇H₁₆O₅

Average Mass

300.3059 Da

Monoisotopic Mass

300.09977 Da

IUPAC Name

3-(2,4-dimethoxyphenyl)-7-hydroxy-3,4-dihydro-2H-1-benzopyran-4-one

Traditional Name

sativanone

CAS Registry Number

Not Available

SMILES

COC1=CC(OC)=C(C=C1)C1COC2=C(C=CC(O)=C2)C1=O

InChI Identifier

InChI=1S/C17H16O5/c1-20-11-4-6-12(15(8-11)21-2)14-9-22-16-7-10(18)3-5-13(16)17(14)19/h3-8,14,18H,9H2,1-2H3

InChI Key

JOVYBWHPTQRVNZ-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Dalbergia odorifera	LOTUS Database	35616633
Dalbergia parviflora	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 4'-o-methylated isoflavonoids. These are isoflavonoids with methoxy groups attached to the C4' atom of the isoflavonoid backbone. Isoflavonoids are natural products derived from 3-phenylchromen-4-one.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Isoflavonoids

Sub Class

O-methylated isoflavonoids

Direct Parent

4'-O-methylated isoflavonoids

Alternative Parents

Substituents

2p-methoxyisoflavonoid-skeleton
4p-methoxyisoflavonoid
Isoflavanol
Hydroxyisoflavonoid
Isoflavanone
Isoflavan
Chromone
Chromane
Benzopyran
1-benzopyran
Dimethoxybenzene
M-dimethoxybenzene
Aryl ketone
Phenol ether
Methoxybenzene
Anisole
Aryl alkyl ketone
Phenoxy compound
Alkyl aryl ether
1-hydroxy-2-unsubstituted benzenoid
Benzenoid
Monocyclic benzene moiety
Ketone
Ether
Oxacycle
Organoheterocyclic compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organic oxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Isoflavonoids (LMPK12050464 )

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.52	ALOGPS
logP	2.37	ChemAxon
logS	-3.8	ALOGPS
pKa (Strongest Acidic)	7.78	ChemAxon
pKa (Strongest Basic)	-4.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	64.99 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	80.64 m³·mol⁻¹	ChemAxon
Polarizability	30.74 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0038110

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

FDB017335

KNApSAcK ID

C00009537

Chemspider ID

10289893

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

13886678

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Sativanone (NP0137076)

MOL for NP0137076 (Sativanone)

3D MOL for NP0137076 (Sativanone)

3D SDF for NP0137076 (Sativanone)

3D-SDF for NP0137076 (Sativanone)

PDB for NP0137076 (Sativanone)

3D PDB for NP0137076 (Sativanone)

SMILES for NP0137076 (Sativanone)

INCHI for NP0137076 (Sativanone)

Structure for NP0137076 (Sativanone)

3D Structure for NP0137076 (Sativanone)