NP-MRD: Showing NP-Card for Glutaminylasparagine (NP0136422)

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Record Information

Version

2.0

Created at

2022-05-12 15:14:08 UTC

Updated at

2022-05-12 15:14:08 UTC

NP-MRD ID

NP0136422

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Glutaminylasparagine

Description

Glutaminylasparagine, also known as Q-N dipeptide or L-GLN-L-asn, belongs to the class of organic compounds known as dipeptides. These are organic compounds containing a sequence of exactly two alpha-amino acids joined by a peptide bond. Glutaminylasparagine is a very strong basic compound (based on its pKa). It is an incomplete breakdown product of protein digestion or protein catabolism.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 34 33  0  0  0  0  0  0  0  0999 V2000
    2.4667    2.2388   -1.3149 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.4668    1.7012    0.0102 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2179    2.5208    0.9292 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7381    0.2927    0.2980 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5084   -0.0357    1.7297 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1106    0.1593    2.2486 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1380   -0.2156    3.6371 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0921   -0.6492    1.5663 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3514   -1.6782    2.1899 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4503   -0.3957    0.2780 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4491   -1.2724   -0.2888 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7539   -0.6174   -0.5687 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6894    0.5019   -1.5197 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7807    1.2768   -1.9314 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5616    0.7873   -2.0035 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9091   -1.9893   -1.4911 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2700   -1.7816   -1.8700 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6680   -2.8892   -2.2179 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0612    1.7504   -2.0194 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9047    3.0765   -1.5757 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0997   -0.3536   -0.3717 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8248    0.1164    0.0104 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2466    0.5497    2.3432 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8433   -1.1090    1.8758 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8643    1.2328    2.2123 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5189   -0.9864    3.8962 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2216    0.5607    4.2989 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0996    0.4550   -0.2263 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6373   -2.0748    0.4551 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4336   -1.3854   -0.9905 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1425   -0.2125    0.3921 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7251    0.7912   -1.9679 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6559    2.2801   -2.1864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2864   -2.6455   -2.9692 H   0  0  0  0  0  0  0  0  0  0  0  0
  7  6  1  0
  6  5  1  0
  5  4  1  0
  4  2  1  0
  2  1  1  0
  2  3  2  0
  6  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
 11 16  1  0
 16 18  1  0
 16 17  2  0
  7 26  1  0
  7 27  1  0
  6 25  1  1
  5 23  1  0
  5 24  1  0
  4 21  1  0
  4 22  1  0
  1 19  1  0
  1 20  1  0
 10 28  1  0
 11 29  1  1
 12 30  1  0
 12 31  1  0
 14 32  1  0
 14 33  1  0
 18 34  1  0
M  END


  Mrv1652304062013352D          

 18 17  0  0  0  0            999 V2000
 2501.4290 2500.0010    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
 2500.7150 2499.5877    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
 2500.0010 2500.0010    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 2499.2870 2499.5877    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
 2498.5730 2500.0010    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 2497.8590 2499.5877    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 2497.1429 2500.0010    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 2496.4289 2499.5877    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
 2497.1429 2500.8255    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
 2499.2870 2498.7633    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
 2500.0010 2500.8255    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
 2502.1430 2499.5877    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 2502.8570 2500.0010    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 2503.5710 2499.5877    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
 2502.8570 2500.8255    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
 2501.4290 2500.8255    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 2502.1430 2501.2366    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
 2500.7150 2501.2366    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  1 12  1  0  0  0  0
  1 16  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  3 11  2  0  0  0  0
  4  5  1  0  0  0  0
  4 10  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  2  0  0  0  0
 16 17  1  0  0  0  0
 16 18  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0136422

> <DATABASE_NAME>
NP-MRD

> <SMILES>
N[C@@H](CCC(N)=O)C(=O)N[C@@H](CC(N)=O)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C9H16N4O5/c10-4(1-2-6(11)14)8(16)13-5(9(17)18)3-7(12)15/h4-5H,1-3,10H2,(H2,11,14)(H2,12,15)(H,13,16)(H,17,18)/t4-,5-/m0/s1

> <INCHI_KEY>
DXJZITDUDUPINW-WHFBIAKZSA-N

> <FORMULA>
C9H16N4O5

> <MOLECULAR_WEIGHT>
260.25

> <EXACT_MASS>
260.112069631

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
34

> <JCHEM_AVERAGE_POLARIZABILITY>
24.37022667874996

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S)-2-[(2S)-2-amino-4-carbamoylbutanamido]-3-carbamoylpropanoic acid

> <ALOGPS_LOGP>
-3.48

> <JCHEM_LOGP>
-5.988809692186309

> <ALOGPS_LOGS>
-1.75

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.053946852410814

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.409222968614653

> <JCHEM_PKA_STRONGEST_BASIC>
8.225602574029903

> <JCHEM_POLAR_SURFACE_AREA>
178.6

> <JCHEM_REFRACTIVITY>
58.264900000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.65e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S)-2-[(2S)-2-amino-4-carbamoylbutanamido]-3-carbamoylpropanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-APR-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-APR-20         0                                  
HETATM    1  C   UNK     0    4669.3344666.669   0.000  0.00  0.00           C+0
HETATM    2  N   UNK     0    4668.0014665.897   0.000  0.00  0.00           N+0
HETATM    3  C   UNK     0    4666.6694666.669   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0    4665.3364665.897   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0    4664.0034666.669   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0    4662.6704665.897   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0    4661.3334666.669   0.000  0.00  0.00           C+0
HETATM    8  N   UNK     0    4660.0014665.897   0.000  0.00  0.00           N+0
HETATM    9  O   UNK     0    4661.3334668.208   0.000  0.00  0.00           O+0
HETATM   10  N   UNK     0    4665.3364664.358   0.000  0.00  0.00           N+0
HETATM   11  O   UNK     0    4666.6694668.208   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0    4670.6674665.897   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0    4672.0004666.669   0.000  0.00  0.00           C+0
HETATM   14  N   UNK     0    4673.3334665.897   0.000  0.00  0.00           N+0
HETATM   15  O   UNK     0    4672.0004668.208   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0    4669.3344668.208   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0    4670.6674668.975   0.000  0.00  0.00           O+0
HETATM   18  O   UNK     0    4668.0014668.975   0.000  0.00  0.00           O+0
CONECT    1    2   12   16                                                  
CONECT    2    1    3                                                       
CONECT    3    2    4   11                                                  
CONECT    4    3    5   10                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7                                                            
CONECT   10    4                                                            
CONECT   11    3                                                            
CONECT   12    1   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16    1   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16                                                            
MASTER        0    0    0    0    0    0    0    0   18    0   34    0
END

View in JSmol

Synonyms

Value	Source
(2S)-2-[(2S)-2-Amino-4-carbamoylbutanamido]-3-carbamoylpropanoic acid	ChEBI
(2S)-4-Amino-2-{[(2S)-2,5-diamino-5-oxopentanoyl]amino}-4-oxobutanoic acid	ChEBI
Glutamine asparagine dipeptide	ChEBI
L-GLN-L-Asn	ChEBI
L-Glutaminyl-L-asparagine	ChEBI
N(2)-L-Glutaminyl-L-asparagine	ChEBI
Q-N	ChEBI
Q-N Dipeptide	ChEBI
QN	ChEBI
QN Dipeptide	ChEBI
(2S)-2-[(2S)-2-Amino-4-carbamoylbutanamido]-3-carbamoylpropanoate	Generator
(2S)-4-Amino-2-{[(2S)-2,5-diamino-5-oxopentanoyl]amino}-4-oxobutanoate	Generator
GLN-Asn	HMDB
N2-Glutaminylasparagine	HMDB
N2-L-Glutaminyl-L-asparagine	HMDB
Glutaminyl-asparagine	HMDB
Glutamine-asparagine dipeptide	HMDB
Glutaminylasparagine	HMDB, ChEBI
(2S)-2-{[(2S)-2-amino-1-hydroxy-4-(C-hydroxycarbonimidoyl)butylidene]amino}-3-(C-hydroxycarbonimidoyl)propanoate	Generator

Chemical Formula

C₉H₁₆N₄O₅

Average Mass

260.2500 Da

Monoisotopic Mass

260.11207 Da

IUPAC Name

(2S)-2-[(2S)-2-amino-4-carbamoylbutanamido]-3-carbamoylpropanoic acid

Traditional Name

(2S)-2-[(2S)-2-amino-4-carbamoylbutanamido]-3-carbamoylpropanoic acid

CAS Registry Number

Not Available

SMILES

N[C@@H](CCC(N)=O)C(=O)N[C@@H](CC(N)=O)C(O)=O

InChI Identifier

InChI=1S/C9H16N4O5/c10-4(1-2-6(11)14)8(16)13-5(9(17)18)3-7(12)15/h4-5H,1-3,10H2,(H2,11,14)(H2,12,15)(H,13,16)(H,17,18)/t4-,5-/m0/s1

InChI Key

DXJZITDUDUPINW-WHFBIAKZSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as dipeptides. These are organic compounds containing a sequence of exactly two alpha-amino acids joined by a peptide bond.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Amino acids, peptides, and analogues

Direct Parent

Dipeptides

Alternative Parents

Substituents

Alpha-dipeptide
Glutamine or derivatives
Asparagine or derivatives
N-acyl-alpha-amino acid
N-acyl-alpha amino acid or derivatives
N-acyl-l-alpha-amino acid
Alpha-amino acid amide
Alpha-amino acid or derivatives
N-acyl-amine
Fatty amide
Fatty acid
Fatty acyl
Primary carboxylic acid amide
Amino acid or derivatives
Secondary carboxylic acid amide
Amino acid
Carboxamide group
Carboxylic acid
Monocarboxylic acid or derivatives
Organic nitrogen compound
Organonitrogen compound
Primary aliphatic amine
Organooxygen compound
Primary amine
Hydrocarbon derivative
Carbonyl group
Organic oxide
Amine
Organic oxygen compound
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-3.5	ALOGPS
logP	-6	ChemAxon
logS	-1.8	ALOGPS
pKa (Strongest Acidic)	3.41	ChemAxon
pKa (Strongest Basic)	8.23	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	178.6 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	58.26 m³·mol⁻¹	ChemAxon
Polarizability	24.37 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0028792

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

57568045

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

14767397

PDB ID

Not Available

ChEBI ID

141428

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Glutaminylasparagine (NP0136422)

MOL for NP0136422 (Glutaminylasparagine)

3D MOL for NP0136422 (Glutaminylasparagine)

3D SDF for NP0136422 (Glutaminylasparagine)

3D-SDF for NP0136422 (Glutaminylasparagine)

PDB for NP0136422 (Glutaminylasparagine)

3D PDB for NP0136422 (Glutaminylasparagine)

SMILES for NP0136422 (Glutaminylasparagine)

INCHI for NP0136422 (Glutaminylasparagine)

Structure for NP0136422 (Glutaminylasparagine)

3D Structure for NP0136422 (Glutaminylasparagine)