NP-MRD: Showing NP-Card for 5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl (NP0136315)

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Record Information

Version

2.0

Created at

2022-05-12 15:11:22 UTC

Updated at

2022-05-12 15:11:22 UTC

NP-MRD ID

NP0136315

Secondary Accession Numbers

None

Natural Product Identification

Common Name

5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl

Description

5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose. 5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl is an extremely weak basic (essentially neutral) compound (based on its pKa). These are disaccharides containing both an hexose and a pentose.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304062013162D          

 28 30  0  0  0  0            999 V2000
   -4.1545   -1.9741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8689   -2.3866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8689   -3.2116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545   -3.6241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4400   -3.2116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4400   -2.3866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545   -1.1491    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5834   -3.6241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2979   -3.2116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7104   -1.9421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3778   -2.4270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1229   -3.2116    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0429   -2.4270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1624   -2.1721    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545   -0.3241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545    1.3259    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8689    0.9134    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8689    0.0884    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4400    0.0884    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4400    0.9134    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.7255    1.3259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5834    1.3259    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5834   -0.3241    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545    2.1509    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7255    2.1509    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0111    0.9134    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7255   -3.6241    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2966    1.3259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  1  6  2  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  1  7  1  0  0  0  0
  3  8  1  0  0  0  0
  8  9  1  0  0  0  0
 12  9  1  0  0  0  0
  9 13  1  0  0  0  0
 10 11  1  0  0  0  0
 10 13  1  0  0  0  0
 11 12  1  0  0  0  0
 11 14  2  0  0  0  0
  7 15  1  1  0  0  0
 18 15  1  0  0  0  0
 15 19  1  0  0  0  0
 16 17  1  0  0  0  0
 16 20  1  0  0  0  0
 17 18  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  1  0  0  0
 17 22  1  1  0  0  0
 18 23  1  6  0  0  0
 16 24  1  6  0  0  0
 21 25  2  0  0  0  0
 21 26  1  0  0  0  0
  5 27  1  0  0  0  0
 26 28  1  0  0  0  0
M  END

     RDKit          3D

 50 52  0  0  0  0  0  0  0  0999 V2000
   -5.6277    2.1882    2.3637 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7210    1.4800    1.5322 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1969    0.5503    0.5916 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4432    0.4036    0.5478 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2594   -0.2027   -0.2880 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9943    0.1887    0.0126 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9731   -0.4822   -0.6347 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7932   -0.2024    0.0482 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3348    0.3267   -0.4942 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5117    0.6773   -1.8059 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6909    1.2147   -2.3070 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8392    1.5602   -3.6438 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7550    1.4164   -1.4612 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6267    1.0796   -0.1319 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7522    1.2675    0.8304 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5525   -0.0192    0.8411 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7275    0.0475    1.7819 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7990    0.6917    0.9300 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4469    0.1934   -0.4186 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2221    0.2285   -1.4220 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1563   -0.3064   -0.3982 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4490    0.5513    0.3303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1552   -1.9878   -0.5916 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4475   -2.4563   -1.8844 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2667   -2.4098    0.3084 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9891   -2.2137    1.6541 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5154   -1.6840   -0.1453 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.9789   -2.2749   -1.2992 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2561    3.2211    2.5900 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5888    1.6524    3.3571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6458    2.1980    1.9581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5743    0.0601   -1.3400 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8785   -0.1631   -1.6860 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2727    0.5470   -2.5138 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1976    0.8194   -4.2629 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6871    1.8266   -1.7954 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4165    2.0991    0.5575 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3116    1.3735    1.8363 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9240   -0.8689    1.1876 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0291   -0.9345    2.1778 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4839    0.7789    2.5798 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7897    1.7878    0.9820 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7869    0.2647    1.2521 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3477    0.2880    1.3731 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2225   -2.5124   -0.2859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9881   -3.3130   -2.0797 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4438   -3.4931    0.1573 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0475   -1.9795    1.8185 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2714   -1.8446    0.6502 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2870   -1.6338   -1.9827 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 11 13  2  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
 19 21  1  0
 14 22  2  0
  7 23  1  0
 23 24  1  0
 23 25  1  0
 25 26  1  0
 25 27  1  0
 27 28  1  0
 27  5  1  0
 22  9  1  0
 21 16  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  5 32  1  6
  7 33  1  6
 10 34  1  0
 12 35  1  0
 13 36  1  0
 15 37  1  0
 15 38  1  0
 16 39  1  1
 17 40  1  0
 17 41  1  0
 18 42  1  0
 18 43  1  0
 22 44  1  0
 23 45  1  1
 24 46  1  0
 25 47  1  1
 26 48  1  0
 27 49  1  1
 28 50  1  0
M  END


  Mrv1652304062013162D          

 28 30  0  0  0  0            999 V2000
   -4.1545   -1.9741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8689   -2.3866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8689   -3.2116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545   -3.6241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4400   -3.2116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4400   -2.3866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545   -1.1491    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5834   -3.6241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2979   -3.2116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7104   -1.9421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3778   -2.4270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1229   -3.2116    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0429   -2.4270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1624   -2.1721    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545   -0.3241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545    1.3259    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8689    0.9134    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8689    0.0884    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4400    0.0884    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4400    0.9134    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.7255    1.3259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5834    1.3259    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5834   -0.3241    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545    2.1509    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7255    2.1509    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0111    0.9134    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7255   -3.6241    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2966    1.3259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  1  6  2  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  1  7  1  0  0  0  0
  3  8  1  0  0  0  0
  8  9  1  0  0  0  0
 12  9  1  0  0  0  0
  9 13  1  0  0  0  0
 10 11  1  0  0  0  0
 10 13  1  0  0  0  0
 11 12  1  0  0  0  0
 11 14  2  0  0  0  0
  7 15  1  1  0  0  0
 18 15  1  0  0  0  0
 15 19  1  0  0  0  0
 16 17  1  0  0  0  0
 16 20  1  0  0  0  0
 17 18  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  1  0  0  0
 17 22  1  1  0  0  0
 18 23  1  6  0  0  0
 16 24  1  6  0  0  0
 21 25  2  0  0  0  0
 21 26  1  0  0  0  0
  5 27  1  0  0  0  0
 26 28  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0136315

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)[C@H]1OC(OC2=CC(O)=CC(CC3CCC(=O)O3)=C2)[C@H](O)[C@@H](O)[C@@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C18H22O10/c1-25-17(24)16-14(22)13(21)15(23)18(28-16)27-11-6-8(4-9(19)7-11)5-10-2-3-12(20)26-10/h4,6-7,10,13-16,18-19,21-23H,2-3,5H2,1H3/t10?,13-,14-,15+,16-,18?/m0/s1

> <INCHI_KEY>
SNIRJYJBIJKJEM-LQOUNWOVSA-N

> <FORMULA>
C18H22O10

> <MOLECULAR_WEIGHT>
398.3613

> <EXACT_MASS>
398.121296924

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
50

> <JCHEM_AVERAGE_POLARIZABILITY>
37.58279279602685

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (2S,3S,4S,5R)-3,4,5-trihydroxy-6-{3-hydroxy-5-[(5-oxooxolan-2-yl)methyl]phenoxy}oxane-2-carboxylate

> <ALOGPS_LOGP>
-0.08

> <JCHEM_LOGP>
-0.18657744466666562

> <ALOGPS_LOGS>
-1.93

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.166293838754143

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.355539935829588

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6868312024582437

> <JCHEM_POLAR_SURFACE_AREA>
151.98

> <JCHEM_REFRACTIVITY>
90.08859999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.70e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl (2S,3S,4S,5R)-3,4,5-trihydroxy-6-{3-hydroxy-5-[(5-oxooxolan-2-yl)methyl]phenoxy}oxane-2-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-APR-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-APR-20         0                                  
HETATM    1  C   UNK     0      -7.755  -3.685   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -9.089  -4.455   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -9.089  -5.995   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -7.755  -6.765   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -6.421  -5.995   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -6.421  -4.455   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      -7.755  -2.145   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0     -10.422  -6.765   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0     -11.756  -5.995   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0     -12.526  -3.625   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0     -13.772  -4.530   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0     -13.296  -5.995   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0     -11.280  -4.530   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0     -15.236  -4.055   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      -7.755  -0.605   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -7.755   2.475   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -9.089   1.705   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -9.089   0.165   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      -6.421   0.165   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      -6.421   1.705   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -5.088   2.475   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0     -10.422   2.475   0.000  0.00  0.00           O+0
HETATM   23  O   UNK     0     -10.422  -0.605   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0      -7.755   4.015   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0      -5.088   4.015   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0      -3.754   1.705   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0      -5.088  -6.765   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      -2.420   2.475   0.000  0.00  0.00           C+0
CONECT    1    2    6    7                                                  
CONECT    2    1    3                                                       
CONECT    3    2    4    8                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   27                                                  
CONECT    6    1    5                                                       
CONECT    7    1   15                                                       
CONECT    8    3    9                                                       
CONECT    9    8   12   13                                                  
CONECT   10   11   13                                                       
CONECT   11   10   12   14                                                  
CONECT   12    9   11                                                       
CONECT   13    9   10                                                       
CONECT   14   11                                                            
CONECT   15    7   18   19                                                  
CONECT   16   17   20   24                                                  
CONECT   17   16   18   22                                                  
CONECT   18   15   17   23                                                  
CONECT   19   15   20                                                       
CONECT   20   16   19   21                                                  
CONECT   21   20   25   26                                                  
CONECT   22   17                                                            
CONECT   23   18                                                            
CONECT   24   16                                                            
CONECT   25   21                                                            
CONECT   26   21   28                                                       
CONECT   27    5                                                            
CONECT   28   26                                                            
MASTER        0    0    0    0    0    0    0    0   28    0   60    0
END

View in JSmol

Synonyms

Value	Source
5-(3',5'-Dihydroxyphenyl)-g-valerolactone-O-glucuronide-O-methyl	Generator
5-(3',5'-Dihydroxyphenyl)-γ-valerolactone-O-glucuronide-O-methyl	Generator
Methyl (2S,3S,4S,5R)-3,4,5-trihydroxy-6-{3-hydroxy-5-[(5-oxooxolan-2-yl)methyl]phenoxy}oxane-2-carboxylic acid	Generator

Chemical Formula

C₁₈H₂₂O₁₀

Average Mass

398.3613 Da

Monoisotopic Mass

398.12130 Da

IUPAC Name

methyl (2S,3S,4S,5R)-3,4,5-trihydroxy-6-{3-hydroxy-5-[(5-oxooxolan-2-yl)methyl]phenoxy}oxane-2-carboxylate

Traditional Name

methyl (2S,3S,4S,5R)-3,4,5-trihydroxy-6-{3-hydroxy-5-[(5-oxooxolan-2-yl)methyl]phenoxy}oxane-2-carboxylate

CAS Registry Number

Not Available

SMILES

COC(=O)[C@H]1OC(OC2=CC(O)=CC(CC3CCC(=O)O3)=C2)[C@H](O)[C@@H](O)[C@@H]1O

InChI Identifier

InChI=1S/C18H22O10/c1-25-17(24)16-14(22)13(21)15(23)18(28-16)27-11-6-8(4-9(19)7-11)5-10-2-3-12(20)26-10/h4,6-7,10,13-16,18-19,21-23H,2-3,5H2,1H3/t10?,13-,14-,15+,16-,18?/m0/s1

InChI Key

SNIRJYJBIJKJEM-LQOUNWOVSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Carbohydrates and carbohydrate conjugates

Direct Parent

Phenolic glycosides

Alternative Parents

Substituents

Phenolic glycoside
1-o-glucuronide
O-glucuronide
Glucuronic acid or derivatives
O-glycosyl compound
Phenoxy compound
Phenol ether
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Beta-hydroxy acid
Phenol
Monocyclic benzene moiety
Dicarboxylic acid or derivatives
Gamma butyrolactone
Hydroxy acid
Monosaccharide
Benzenoid
Oxane
Pyran
Methyl ester
Tetrahydrofuran
Lactone
Carboxylic acid ester
Secondary alcohol
Oxacycle
Acetal
Organoheterocyclic compound
Carboxylic acid derivative
Polyol
Organic oxide
Hydrocarbon derivative
Alcohol
Carbonyl group
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-0.08	ALOGPS
logP	-0.19	ChemAxon
logS	-1.9	ALOGPS
pKa (Strongest Acidic)	9.36	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	151.98 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	90.09 m³·mol⁻¹	ChemAxon
Polarizability	37.58 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

HMDB0060030

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

124202096

PDB ID

Not Available

ChEBI ID

89537

Good Scents ID

Not Available

References

General References

Showing NP-Card for 5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl (NP0136315)

MOL for NP0136315 (5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl)

3D MOL for NP0136315 (5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl)

3D SDF for NP0136315 (5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl)

3D-SDF for NP0136315 (5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl)

PDB for NP0136315 (5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl)

3D PDB for NP0136315 (5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl)

SMILES for NP0136315 (5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl)

INCHI for NP0136315 (5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl)

Structure for NP0136315 (5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl)

3D Structure for NP0136315 (5-(3',5'-Dihydroxyphenyl)-gamma-valerolactone-O-glucuronide-O-methyl)