Np mrd loader

Record Information
Version2.0
Created at2022-05-11 16:27:12 UTC
Updated at2022-05-11 16:27:13 UTC
NP-MRD IDNP0086653
Secondary Accession NumbersNone
Natural Product Identification
Common NameN-Acetylglucosamine 6-sulfate
DescriptionN-Acetylglucosamine 6-sulfate, also known as (6S)glcnacb or beta-D-glcnac6S, belongs to the class of organic compounds known as acylaminosugars. These are organic compounds containing a sugar linked to a chain through N-acyl group. N-Acetylglucosamine 6-sulfate was first documented in 1983 (PMID: 6236815). N-Acetylglucosamine 6-sulfate is an extremely weak basic (essentially neutral) compound (based on its pKa) (PMID: 2500866) (PMID: 3462244).
Structure
Thumb
Synonyms
ValueSource
(6S)GlcNAcbChEBI
(6S)GlcNAcbetaChEBI
4[6OSO3]glcnacbetaChEBI
6-O-SulfO-N-acetyl-beta-D-glucosamineChEBI
beta-D-GlcNAc6SChEBI
beta-D-GlcpNAc6SChEBI
N-Acetyl-D-glucosamine 6-sulfateChEBI
N-Acetylglucosamine 6-sulfic acidChEBI
6-O-SulfO-N-acetyl-b-D-glucosamineGenerator
6-O-SulfO-N-acetyl-β-D-glucosamineGenerator
6-O-SulphO-N-acetyl-b-D-glucosamineGenerator
6-O-SulphO-N-acetyl-beta-D-glucosamineGenerator
6-O-SulphO-N-acetyl-β-D-glucosamineGenerator
b-D-GlcNAc6SGenerator
Β-D-glcnac6SGenerator
b-D-GlcpNAc6SGenerator
Β-D-glcpnac6SGenerator
N-Acetyl-D-glucosamine 6-sulfuric acidGenerator
N-Acetyl-D-glucosamine 6-sulphateGenerator
N-Acetyl-D-glucosamine 6-sulphuric acidGenerator
N-Acetylglucosamine 6-sulfuric acidGenerator
N-Acetylglucosamine 6-sulphateGenerator
N-Acetylglucosamine 6-sulphuric acidGenerator
Aga-6-SHMDB
N-Acetyl-glucosamine 6-(hydrogen sulfate)HMDB
N-Acetyl-glucosamine 6-(hydrogen sulphate)HMDB
N-Acetylglucosamine-6-sulfateHMDB
GlcNAc-6-O-sulfateHMDB
N-Acetyl-b-D-glucosamine 6-sulfateHMDB
N-Acetyl-b-D-glucosamine 6-sulfuric acidHMDB
N-Acetyl-b-D-glucosamine 6-sulphateHMDB
N-Acetyl-b-D-glucosamine 6-sulphuric acidHMDB
N-Acetyl-beta-D-glucosamine 6-sulfuric acidHMDB
N-Acetyl-beta-D-glucosamine 6-sulphateHMDB
N-Acetyl-beta-D-glucosamine 6-sulphuric acidHMDB
N-Acetyl-β-D-glucosamine 6-sulfateHMDB
N-Acetyl-β-D-glucosamine 6-sulfuric acidHMDB
N-Acetyl-β-D-glucosamine 6-sulphateHMDB
N-Acetyl-β-D-glucosamine 6-sulphuric acidHMDB
N-Acetylglucosamine 6-sulfateChEBI
Chemical FormulaC8H15NO9S
Average Mass301.2710 Da
Monoisotopic Mass301.04675 Da
IUPAC Name{[(2R,3S,4R,5R,6R)-5-acetamido-3,4,6-trihydroxyoxan-2-yl]methoxy}sulfonic acid
Traditional Name[(2R,3S,4R,5R,6R)-5-acetamido-3,4,6-trihydroxyoxan-2-yl]methoxysulfonic acid
CAS Registry NumberNot Available
SMILES
CC(=O)N[C@H]1[C@H](O)O[C@H](COS(O)(=O)=O)[C@@H](O)[C@@H]1O
InChI Identifier
InChI=1S/C8H15NO9S/c1-3(10)9-5-7(12)6(11)4(18-8(5)13)2-17-19(14,15)16/h4-8,11-13H,2H2,1H3,(H,9,10)(H,14,15,16)/t4-,5-,6-,7-,8-/m1/s1
InChI KeyWJFVEEAIYIOATH-FMDGEEDCSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Anas platyrhynchosFooDB
AnatidaeFooDB
Anser anserFooDB
Bison bisonFooDB
Bos taurusFooDB
Bos taurus X Bison bisonFooDB
Bubalus bubalisFooDB
Capra aegagrus hircusFooDB
CervidaeFooDB
Cervus canadensisFooDB
ColumbaFooDB
ColumbidaeFooDB
Dromaius novaehollandiaeFooDB
Equus caballusFooDB
Gallus gallusFooDB
Lagopus mutaFooDB
LeporidaeFooDB
Lepus timidusFooDB
Melanitta fuscaFooDB
Meleagris gallopavoFooDB
Numida meleagrisFooDB
OdocoileusFooDB
OryctolagusFooDB
Ovis ariesFooDB
PhasianidaeFooDB
Phasianus colchicusFooDB
Struthio camelusFooDB
Sus scrofaFooDB
Sus scrofa domesticaFooDB
Chemical Taxonomy
Description Belongs to the class of organic compounds known as acylaminosugars. These are organic compounds containing a sugar linked to a chain through N-acyl group.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentAcylaminosugars
Alternative Parents
Substituents
  • Acylaminosugar
  • N-acyl-alpha-hexosamine
  • Hexose monosaccharide
  • Monosaccharide sulfate
  • Monosaccharide
  • Oxane
  • Sulfuric acid ester
  • Alkyl sulfate
  • Sulfate-ester
  • Sulfuric acid monoester
  • Organic sulfuric acid or derivatives
  • Acetamide
  • 1,2-diol
  • Carboxamide group
  • Hemiacetal
  • Secondary alcohol
  • Secondary carboxylic acid amide
  • Oxacycle
  • Carboxylic acid derivative
  • Organoheterocyclic compound
  • Polyol
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Alcohol
  • Organic nitrogen compound
  • Organonitrogen compound
  • Carbonyl group
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-2ALOGPS
logP-5ChemAxon
logS-0.83ALOGPS
pKa (Strongest Acidic)-2.1ChemAxon
pKa (Strongest Basic)-1.4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count8ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area162.62 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity57.02 m³·mol⁻¹ChemAxon
Polarizability26.71 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0000814
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB022261
KNApSAcK IDNot Available
Chemspider ID389219
KEGG Compound IDC04132
BioCyc IDCPD-13665
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN ID5778
PubChem Compound440235
PDB IDNot Available
ChEBI ID28132
Good Scents IDNot Available
References
General References
  1. Freeman C, Hopwood JJ: Sanfilippo D syndrome: estimation of N-acetylglucosamine-6-sulfatase activity with a radiolabeled monosulfated disaccharide substrate. Anal Biochem. 1989 Feb 1;176(2):244-8. doi: 10.1016/0003-2697(89)90303-5. [PubMed:2500866 ]
  2. Chambers WH, Oeltmann TN: The effects of hexose 6-O-sulfate esters on human natural killer cell lytic function. J Immunol. 1986 Sep 1;137(5):1469-74. [PubMed:3462244 ]
  3. Hopwood JJ, Elliott H: N-acetylglucosamine 6-sulfate residues in keratan sulfate and heparan sulfate are desulfated by the same enzyme. Biochem Int. 1983 Feb;6(2):141-8. [PubMed:6236815 ]