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Showing NP-Card for 5,6-Dihydro-4-methoxy-2H-pyran-2-one (NP0084887)

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Record Information
Version2.0
Created at2022-04-29 05:30:19 UTC
Updated at2022-04-29 05:30:20 UTC
NP-MRD IDNP0084887
Secondary Accession NumbersNone
Natural Product Identification
Common Name5,6-Dihydro-4-methoxy-2H-pyran-2-one
Description5,6-Dihydro-4-methoxy-2H-pyran-2-one belongs to the class of organic compounds known as dihydropyranones. Dihydropyranones are compounds containing a hydrogenated pyran ring which bears a ketone, and contains one double bond. 5,6-Dihydro-4-methoxy-2H-pyran-2-one is found in Penicillium italicum. 5,6-Dihydro-4-methoxy-2H-pyran-2-one is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
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MOL3D MOLSDFPDBSMILESInChI

MOL for NP0084887 (5,6-Dihydro-4-methoxy-2H-pyran-2-one)


  Mrv0541 05061307102D          

  9  9  0  0  0  0            999 V2000
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  2  1  0  0  0  0
  5  2  1  0  0  0  0
  5  4  2  0  0  0  0
  6  4  1  0  0  0  0
  7  6  2  0  0  0  0
  8  1  1  0  0  0  0
  8  5  1  0  0  0  0
  9  3  1  0  0  0  0
  9  6  1  0  0  0  0
M  END
Download

3D MOL for NP0084887 (5,6-Dihydro-4-methoxy-2H-pyran-2-one)

     RDKit          3D

 17 17  0  0  0  0  0  0  0  0999 V2000
    2.6718   -0.1826    0.1673 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4958   -0.6629    0.7886 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2703   -0.2021    0.2817 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0030    1.0848    0.3147 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2435    1.6299   -0.1860 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5290    2.8769   -0.1670 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1439    0.6814   -0.7111 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0983   -0.6123   -0.0846 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7160   -1.1408   -0.2907 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6348   -0.4906   -0.9187 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6696    0.9063    0.2443 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5617   -0.6228    0.6664 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7297    1.7693    0.7341 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2953   -0.4614    0.9707 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8874   -1.2687   -0.5077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5703   -2.1656    0.1038 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5470   -1.1389   -1.4058 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9  3  1  0
  1 10  1  0
  1 11  1  0
  1 12  1  0
  4 13  1  0
  8 14  1  0
  8 15  1  0
  9 16  1  0
  9 17  1  0
M  END
Download

3D SDF for NP0084887 (5,6-Dihydro-4-methoxy-2H-pyran-2-one)


  Mrv0541 05061307102D          

  9  9  0  0  0  0            999 V2000
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  2  1  0  0  0  0
  5  2  1  0  0  0  0
  5  4  2  0  0  0  0
  6  4  1  0  0  0  0
  7  6  2  0  0  0  0
  8  1  1  0  0  0  0
  8  5  1  0  0  0  0
  9  3  1  0  0  0  0
  9  6  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0084887

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC(=O)OCC1

> <INCHI_IDENTIFIER>
InChI=1S/C6H8O3/c1-8-5-2-3-9-6(7)4-5/h4H,2-3H2,1H3

> <INCHI_KEY>
MEZHTUKDGVTUCD-UHFFFAOYSA-N

> <FORMULA>
C6H8O3

> <MOLECULAR_WEIGHT>
128.1259

> <EXACT_MASS>
128.047344122

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_AVERAGE_POLARIZABILITY>
12.253622497331003

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
4-methoxy-5,6-dihydro-2H-pyran-2-one

> <ALOGPS_LOGP>
0.39

> <JCHEM_LOGP>
0.038555818000000436

> <ALOGPS_LOGS>
-0.18

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
16.33974316417528

> <JCHEM_PKA_STRONGEST_BASIC>
-4.787282827620635

> <JCHEM_POLAR_SURFACE_AREA>
35.53

> <JCHEM_REFRACTIVITY>
32.7563

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.51e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4-methoxy-5,6-dihydropyran-2-one

> <JCHEM_VEBER_RULE>
1

$$$$
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3D-SDF for NP0084887 (5,6-Dihydro-4-methoxy-2H-pyran-2-one)

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PDB for NP0084887 (5,6-Dihydro-4-methoxy-2H-pyran-2-one)
HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       1.334   3.850   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0      -1.334  -0.770   0.000  0.00  0.00           O+0
HETATM    9  O   UNK     0       2.667   1.540   0.000  0.00  0.00           O+0
CONECT    1    8                                                            
CONECT    2    3    5                                                       
CONECT    3    2    9                                                       
CONECT    4    5    6                                                       
CONECT    5    2    4    8                                                  
CONECT    6    4    7    9                                                  
CONECT    7    6                                                            
CONECT    8    1    5                                                       
CONECT    9    3    6                                                       
MASTER        0    0    0    0    0    0    0    0    9    0   18    0
END

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3D PDB for NP0084887 (5,6-Dihydro-4-methoxy-2H-pyran-2-one)
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SMILES for NP0084887 (5,6-Dihydro-4-methoxy-2H-pyran-2-one)
COC1=CC(=O)OCC1
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INCHI for NP0084887 (5,6-Dihydro-4-methoxy-2H-pyran-2-one)
InChI=1S/C6H8O3/c1-8-5-2-3-9-6(7)4-5/h4H,2-3H2,1H3
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View in JSmol
SynonymsNot Available
Chemical FormulaC6H8O3
Average Mass128.1259 Da
Monoisotopic Mass128.04734 Da
IUPAC Name4-methoxy-5,6-dihydro-2H-pyran-2-one
Traditional Name4-methoxy-5,6-dihydropyran-2-one
CAS Registry NumberNot Available
SMILES
COC1=CC(=O)OCC1
InChI Identifier
InChI=1S/C6H8O3/c1-8-5-2-3-9-6(7)4-5/h4H,2-3H2,1H3
InChI KeyMEZHTUKDGVTUCD-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Penicillium italicumFungi
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dihydropyranones. Dihydropyranones are compounds containing a hydrogenated pyran ring which bears a ketone, and contains one double bond.
KingdomOrganic compounds  
Super ClassOrganoheterocyclic compounds  
ClassPyrans  
Sub ClassPyranones and derivatives  
Direct ParentDihydropyranones  
Alternative Parents
Substituents
  • Dihydropyranone
    • 

  • Vinylogous ester
    • 

  • Alpha,beta-unsaturated carboxylic ester
    • 

  • Enoate ester
    • 

  • Lactone
    • 

  • Carboxylic acid ester
    • 

  • Oxacycle
    • 

  • Monocarboxylic acid or derivatives
    • 

  • Carboxylic acid derivative
    • 

  • Organic oxygen compound
    • 

  • Organic oxide
    • 

  • Hydrocarbon derivative
    • 

  • Organooxygen compound
    • 

  • Carbonyl group
    • 

  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.39ALOGPS
logP0.039ChemAxon
logS-0.18ALOGPS
pKa (Strongest Acidic)16.34ChemAxon
pKa (Strongest Basic)-4.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area35.53 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity32.76 m³·mol⁻¹ChemAxon
Polarizability12.25 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0033517  
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB011572  
KNApSAcK IDNot Available
Chemspider ID24217181  
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound15086343  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General ReferencesNot Available