NP-MRD: Showing NP-Card for Diferuloylspermine (NP0084550)

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Record Information

Version

2.0

Created at

2022-04-29 05:15:30 UTC

Updated at

2022-04-29 05:15:30 UTC

NP-MRD ID

NP0084550

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Diferuloylspermine

Description

Diferuloylspermine is found in Ananas comosus . Based on a literature review very few articles have been published on (2E)-N-[3-({4-[(3-{[(2E)-1-hydroxy-3-(4-hydroxy-3-methoxyphenyl)prop-2-en-1-ylidene]amino}propyl)amino]butyl}amino)propyl]-3-(4-hydroxy-3-methoxyphenyl)prop-2-enimidic acid.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304292207152D          

 40 41  0  0  0  0            999 V2000
    2.1434   -8.6625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -7.8375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -9.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302  -11.1375    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   10.0026  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   20.7197  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0052  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.7197  -12.7875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
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  6  7  2  0  0  0  0
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 35 36  2  0  0  0  0
 28 36  1  0  0  0  0
 25 37  2  0  0  0  0
 10 38  2  0  0  0  0
  7 39  1  0  0  0  0
 39 40  2  0  0  0  0
  2 40  1  0  0  0  0
M  END

     RDKit          3D

 82 83  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv1652304292207152D          

 40 41  0  0  0  0            999 V2000
    2.1434   -8.6625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   20.0052  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.7197  -11.1375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.7197  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0052  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.7197  -12.7875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.2907  -12.7875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.5762  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4328  -10.3125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158  -12.3750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -9.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  3  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 30 33  2  0  0  0  0
 33 34  1  0  0  0  0
 33 35  1  0  0  0  0
 35 36  2  0  0  0  0
 28 36  1  0  0  0  0
 25 37  2  0  0  0  0
 10 38  2  0  0  0  0
  7 39  1  0  0  0  0
 39 40  2  0  0  0  0
  2 40  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0084550

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=C(O)C=CC(\C=C\C(=O)NCCCNCCCCNCCCNC(=O)\C=C\C2=CC(OC)=C(O)C=C2)=C1

> <INCHI_IDENTIFIER>
InChI=1S/C30H42N4O6/c1-39-27-21-23(7-11-25(27)35)9-13-29(37)33-19-5-17-31-15-3-4-16-32-18-6-20-34-30(38)14-10-24-8-12-26(36)28(22-24)40-2/h7-14,21-22,31-32,35-36H,3-6,15-20H2,1-2H3,(H,33,37)(H,34,38)/b13-9+,14-10+

> <INCHI_KEY>
HWWSHCYJIPNNFA-UTLPMFLDSA-N

> <FORMULA>
C30H42N4O6

> <MOLECULAR_WEIGHT>
554.688

> <EXACT_MASS>
554.310435088

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
82

> <JCHEM_AVERAGE_POLARIZABILITY>
64.42609094209811

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
6

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2E)-3-(4-hydroxy-3-methoxyphenyl)-N-(3-{[4-({3-[(2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enamido]propyl}amino)butyl]amino}propyl)prop-2-enamide

> <ALOGPS_LOGP>
2.82

> <JCHEM_LOGP>
0.4149511626428405

> <ALOGPS_LOGS>
-5.38

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
2

> <JCHEM_PKA>
10.396862889249249

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.487060133901547

> <JCHEM_PKA_STRONGEST_BASIC>
10.881159213473335

> <JCHEM_POLAR_SURFACE_AREA>
141.18

> <JCHEM_REFRACTIVITY>
159.16639999999992

> <JCHEM_ROTATABLE_BOND_COUNT>
19

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.30e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2E)-3-(4-hydroxy-3-methoxyphenyl)-N-(3-{[4-({3-[(2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enamido]propyl}amino)butyl]amino}propyl)prop-2-enamide

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 29-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   29-APR-22         0                                  
HETATM    1  O   UNK     0       4.001 -16.170   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0       5.335 -16.940   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.668 -16.170   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       6.668 -14.630   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       8.002 -13.860   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       8.002 -16.940   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.002 -18.480   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       9.336 -19.250   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       9.336 -20.790   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      10.669 -21.560   0.000  0.00  0.00           C+0
HETATM   11  N   UNK     0      12.003 -20.790   0.000  0.00  0.00           N+0
HETATM   12  C   UNK     0      13.337 -21.560   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      14.670 -20.790   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      16.004 -21.560   0.000  0.00  0.00           C+0
HETATM   15  N   UNK     0      17.338 -20.790   0.000  0.00  0.00           N+0
HETATM   16  C   UNK     0      18.672 -21.560   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      20.005 -20.790   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      21.339 -21.560   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      22.673 -20.790   0.000  0.00  0.00           C+0
HETATM   20  N   UNK     0      24.006 -21.560   0.000  0.00  0.00           N+0
HETATM   21  C   UNK     0      25.340 -20.790   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      26.674 -21.560   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      28.007 -20.790   0.000  0.00  0.00           C+0
HETATM   24  N   UNK     0      29.341 -21.560   0.000  0.00  0.00           N+0
HETATM   25  C   UNK     0      30.675 -20.790   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      32.008 -21.560   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      33.342 -20.790   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      34.676 -21.560   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      36.009 -20.790   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      37.343 -21.560   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0      38.677 -20.790   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      38.677 -19.250   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      37.343 -23.100   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      38.677 -23.870   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      36.009 -23.870   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      34.676 -23.100   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0      30.675 -19.250   0.000  0.00  0.00           O+0
HETATM   38  O   UNK     0      10.669 -23.100   0.000  0.00  0.00           O+0
HETATM   39  C   UNK     0       6.668 -19.250   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0       5.335 -18.480   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   40                                                  
CONECT    3    2    4    6                                                  
CONECT    4    3    5                                                       
CONECT    5    4                                                            
CONECT    6    3    7                                                       
CONECT    7    6    8   39                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   38                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26   37                                                  
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29   36                                                  
CONECT   29   28   30                                                       
CONECT   30   29   31   33                                                  
CONECT   31   30   32                                                       
CONECT   32   31                                                            
CONECT   33   30   34   35                                                  
CONECT   34   33                                                            
CONECT   35   33   36                                                       
CONECT   36   35   28                                                       
CONECT   37   25                                                            
CONECT   38   10                                                            
CONECT   39    7   40                                                       
CONECT   40   39    2                                                       
MASTER        0    0    0    0    0    0    0    0   40    0   82    0
END

View in JSmol

Synonyms

Value	Source
(2E)-N-[3-({4-[(3-{[(2E)-1-hydroxy-3-(4-hydroxy-3-methoxyphenyl)prop-2-en-1-ylidene]amino}propyl)amino]butyl}amino)propyl]-3-(4-hydroxy-3-methoxyphenyl)prop-2-enimidate	Generator

Chemical Formula

C₃₀H₄₂N₄O₆

Average Mass

554.6880 Da

Monoisotopic Mass

554.31044 Da

IUPAC Name

(2E)-3-(4-hydroxy-3-methoxyphenyl)-N-(3-{[4-({3-[(2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enamido]propyl}amino)butyl]amino}propyl)prop-2-enamide

Traditional Name

(2E)-3-(4-hydroxy-3-methoxyphenyl)-N-(3-{[4-({3-[(2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enamido]propyl}amino)butyl]amino}propyl)prop-2-enamide

CAS Registry Number

Not Available

SMILES

COC1=C(O)C=CC(\C=C\C(=O)NCCCNCCCCNCCCNC(=O)\C=C\C2=CC(OC)=C(O)C=C2)=C1

InChI Identifier

InChI=1S/C30H42N4O6/c1-39-27-21-23(7-11-25(27)35)9-13-29(37)33-19-5-17-31-15-3-4-16-32-18-6-20-34-30(38)14-10-24-8-12-26(36)28(22-24)40-2/h7-14,21-22,31-32,35-36H,3-6,15-20H2,1-2H3,(H,33,37)(H,34,38)/b13-9+,14-10+

InChI Key

HWWSHCYJIPNNFA-UTLPMFLDSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Ananas comosus	Plant	KNApSAcK

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.82	ALOGPS
logP	0.41	ChemAxon
logS	-5.4	ALOGPS
pKa (Strongest Acidic)	9.49	ChemAxon
pKa (Strongest Basic)	10.88	ChemAxon
Physiological Charge	2	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	6	ChemAxon
Polar Surface Area	141.18 Å²	ChemAxon
Rotatable Bond Count	19	ChemAxon
Refractivity	159.17 m³·mol⁻¹	ChemAxon
Polarizability	64.43 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00054016

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

102363601

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Diferuloylspermine (NP0084550)

MOL for NP0084550 (Diferuloylspermine)

3D MOL for NP0084550 (Diferuloylspermine)

3D SDF for NP0084550 (Diferuloylspermine)

3D-SDF for NP0084550 (Diferuloylspermine)

PDB for NP0084550 (Diferuloylspermine)

3D PDB for NP0084550 (Diferuloylspermine)

SMILES for NP0084550 (Diferuloylspermine)

INCHI for NP0084550 (Diferuloylspermine)

Structure for NP0084550 (Diferuloylspermine)

3D Structure for NP0084550 (Diferuloylspermine)