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Showing NP-Card for 5-Bromopyrrole-2-(N-methoxymethyl)carboxamide (NP0082971)

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Record Information
Version2.0
Created at2022-04-29 04:02:02 UTC
Updated at2022-04-29 04:02:02 UTC
NP-MRD IDNP0082971
Secondary Accession NumbersNone
Natural Product Identification
Common Name5-Bromopyrrole-2-(N-methoxymethyl)carboxamide
Description5-Bromo-N-(methoxymethyl)-1H-pyrrole-2-carboxamide belongs to the class of organic compounds known as 2-heteroaryl carboxamides. 2-Heteroaryl carboxamides are compounds containing a heteroaromatic ring that carries a carboxamide group. 5-Bromopyrrole-2-(N-methoxymethyl)carboxamide is found in Agelas nakamurai. 5-Bromo-N-(methoxymethyl)-1H-pyrrole-2-carboxamide is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Thumb
MOL3D MOLSDFPDBSMILESInChI

MOL for NP0082971 (5-Bromopyrrole-2-(N-methoxymethyl)carboxamide)


  Mrv1533004241515242D          

 12 12  0  0  0  0            999 V2000
   -0.6865   -2.4373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0280   -2.0248    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7425   -2.4373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4569   -2.0248    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1714   -2.4373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1714   -3.2623    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8859   -2.0248    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9721   -1.2043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7791   -1.0328    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1916   -1.7472    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0121   -1.8335    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
    3.6396   -2.3603    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
  7 12  1  0  0  0  0
M  END
Download

3D MOL for NP0082971 (5-Bromopyrrole-2-(N-methoxymethyl)carboxamide)

     RDKit          3D

 21 21  0  0  0  0  0  0  0  0999 V2000
    2.8853    1.2257    0.6250 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9827    0.3265   -0.4331 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4264   -0.9093   -0.1163 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0228   -0.7895    0.2149 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.1240   -0.2726   -0.7464 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4996    0.0933   -1.8956 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2903   -0.1461   -0.4279 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8888   -0.4910    0.7686 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2361   -0.2321    0.7029 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4619    0.2793   -0.5553 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1310    0.8416   -1.2806 Br  0  0  0  0  0  0  0  0  0  0  0  0
   -2.2823    0.3177   -1.2045 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.4182    0.8387    1.5258 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3905    2.1559    0.3387 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8396    1.4697    0.8847 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4598   -1.5064   -1.0746 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0003   -1.4808    0.6163 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7000   -1.0831    1.1472 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3642   -0.9055    1.6303 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9877   -0.3865    1.4628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1069    0.6543   -2.1829 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 10 12  1  0
 12  7  1  0
  1 13  1  0
  1 14  1  0
  1 15  1  0
  3 16  1  0
  3 17  1  0
  4 18  1  0
  8 19  1  0
  9 20  1  0
 12 21  1  0
M  END
Download

3D SDF for NP0082971 (5-Bromopyrrole-2-(N-methoxymethyl)carboxamide)


  Mrv1533004241515242D          

 12 12  0  0  0  0            999 V2000
   -0.6865   -2.4373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0280   -2.0248    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7425   -2.4373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4569   -2.0248    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1714   -2.4373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1714   -3.2623    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8859   -2.0248    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9721   -1.2043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7791   -1.0328    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1916   -1.7472    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0121   -1.8335    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
    3.6396   -2.3603    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
  7 12  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0082971

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COCNC(=O)C1=CC=C(Br)N1

> <INCHI_IDENTIFIER>
InChI=1S/C7H9BrN2O2/c1-12-4-9-7(11)5-2-3-6(8)10-5/h2-3,10H,4H2,1H3,(H,9,11)

> <INCHI_KEY>
WZKJTKXDWQAFGC-UHFFFAOYSA-N

> <FORMULA>
C7H9BrN2O2

> <MOLECULAR_WEIGHT>
233.065

> <EXACT_MASS>
231.984741

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
21

> <JCHEM_AVERAGE_POLARIZABILITY>
19.475929750673203

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
5-bromo-N-(methoxymethyl)-1H-pyrrole-2-carboxamide

> <ALOGPS_LOGP>
0.87

> <JCHEM_LOGP>
0.5796809646666667

> <ALOGPS_LOGS>
-2.12

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.061326834196521

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.353634255936825

> <JCHEM_PKA_STRONGEST_BASIC>
-2.261477713842914

> <JCHEM_POLAR_SURFACE_AREA>
54.12

> <JCHEM_REFRACTIVITY>
47.92719999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.77e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
5-bromo-N-(methoxymethyl)-1H-pyrrole-2-carboxamide

> <JCHEM_VEBER_RULE>
0

$$$$
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3D-SDF for NP0082971 (5-Bromopyrrole-2-(N-methoxymethyl)carboxamide)

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PDB for NP0082971 (5-Bromopyrrole-2-(N-methoxymethyl)carboxamide)
HEADER    PROTEIN                                 24-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-APR-15         0                                  
HETATM    1  C   UNK     0      -1.281  -4.550   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       0.052  -3.780   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       1.386  -4.550   0.000  0.00  0.00           C+0
HETATM    4  N   UNK     0       2.720  -3.780   0.000  0.00  0.00           N+0
HETATM    5  C   UNK     0       4.053  -4.550   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       4.053  -6.090   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       5.387  -3.780   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.548  -2.248   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       7.054  -1.928   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       7.824  -3.262   0.000  0.00  0.00           C+0
HETATM   11 Br   UNK     0       9.356  -3.422   0.000  0.00  0.00          Br+0
HETATM   12  N   UNK     0       6.794  -4.406   0.000  0.00  0.00           N+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8   12                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10    7                                                       
MASTER        0    0    0    0    0    0    0    0   12    0   24    0
END

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3D PDB for NP0082971 (5-Bromopyrrole-2-(N-methoxymethyl)carboxamide)
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SMILES for NP0082971 (5-Bromopyrrole-2-(N-methoxymethyl)carboxamide)
COCNC(=O)C1=CC=C(Br)N1
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INCHI for NP0082971 (5-Bromopyrrole-2-(N-methoxymethyl)carboxamide)
InChI=1S/C7H9BrN2O2/c1-12-4-9-7(11)5-2-3-6(8)10-5/h2-3,10H,4H2,1H3,(H,9,11)
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View in JSmol
SynonymsNot Available
Chemical FormulaC7H9BrN2O2
Average Mass233.0650 Da
Monoisotopic Mass231.98474 Da
IUPAC Name5-bromo-N-(methoxymethyl)-1H-pyrrole-2-carboxamide
Traditional Name5-bromo-N-(methoxymethyl)-1H-pyrrole-2-carboxamide
CAS Registry NumberNot Available
SMILES
COCNC(=O)C1=CC=C(Br)N1
InChI Identifier
InChI=1S/C7H9BrN2O2/c1-12-4-9-7(11)5-2-3-6(8)10-5/h2-3,10H,4H2,1H3,(H,9,11)
InChI KeyWZKJTKXDWQAFGC-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Agelas nakamuraiAnimalia
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 2-heteroaryl carboxamides. 2-Heteroaryl carboxamides are compounds containing a heteroaromatic ring that carries a carboxamide group.
KingdomOrganic compounds  
Super ClassOrganic acids and derivatives  
ClassCarboxylic acids and derivatives  
Sub ClassCarboxylic acid derivatives  
Direct Parent2-heteroaryl carboxamides  
Alternative Parents
Substituents
  • 2-heteroaryl carboxamide
    • 

  • Pyrrole-2-carboxamide
    • 

  • Pyrrole-2-carboxylic acid or derivatives
    • 

  • Aryl bromide
    • 

  • Aryl halide
    • 

  • Substituted pyrrole
    • 

  • Heteroaromatic compound
    • 

  • Pyrrole
    • 

  • Secondary carboxylic acid amide
    • 

  • Azacycle
    • 

  • Organoheterocyclic compound
    • 

  • Organic nitrogen compound
    • 

  • Hydrocarbon derivative
    • 

  • Organic oxide
    • 

  • Organooxygen compound
    • 

  • Organonitrogen compound
    • 

  • Organobromide
    • 

  • Organohalogen compound
    • 

  • Organic oxygen compound
    • 

  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.87ALOGPS
logP0.58ChemAxon
logS-2.1ALOGPS
pKa (Strongest Acidic)13.35ChemAxon
pKa (Strongest Basic)-2.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area54.12 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity47.93 m³·mol⁻¹ChemAxon
Polarizability19.48 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound21775021  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General ReferencesNot Available