NP-MRD: Showing NP-Card for (+)-Subalatin (NP0081909)

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Record Information

Version

2.0

Created at

2022-04-29 02:58:40 UTC

Updated at

2022-04-29 02:58:40 UTC

NP-MRD ID

NP0081909

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(+)-Subalatin

Description

(2R,3R)-12-hydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-3,10-dihydro-2H-1,4,5-trioxatetraphen-10-one belongs to the class of organic compounds known as phenylbenzo-1,4-dioxanes. These are benzo-1,3-dioxanes having a phenyl group attached to the 1,4-dioxane moiety. (+)-Subalatin is found in Hypericum chinense. Based on a literature review very few articles have been published on (2R,3R)-12-hydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-3,10-dihydro-2H-1,4,5-trioxatetraphen-10-one.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304292204582D          

 33 37  0  0  1  0            999 V2000
    3.9550    1.0361    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6850    0.2566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2251   -0.3671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0352   -0.2111    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3052    0.5684    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.7651    1.1921    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.0352    1.9716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4951    2.5952    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1154    0.7243    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3854    1.5039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1955    1.6598    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7356    1.0361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4656    0.2566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6555    0.1007    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0057   -0.3671    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.8158   -0.2111    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5458    1.1921    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.4656    2.4393    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.2757    2.5952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9550   -1.1466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1449   -1.3025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6048   -0.6789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8748    0.1007    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3347    0.7243    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5246    0.5684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2546   -0.2111    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7946   -0.8348    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5246   -1.6143    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4444   -0.3671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0957    0.2566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1744    1.0361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9845    1.1921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4951   -1.7702    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  6  0  0  0
  7  8  1  0  0  0  0
  5  9  1  1  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
  9 14  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 12 17  1  0  0  0  0
 11 18  1  0  0  0  0
 18 19  1  0  0  0  0
  3 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
  2 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 22 27  1  0  0  0  0
 27 28  2  0  0  0  0
 26 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 31 32  1  0  0  0  0
 25 32  2  0  0  0  0
 20 33  1  0  0  0  0
M  END

     RDKit          3D

 53 57  0  0  0  0  0  0  0  0999 V2000
    4.5768    3.6128   -1.0478 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3298    2.5696   -0.4967 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7266    1.3478   -0.1443 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3730    1.2056   -0.3565 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6906    0.0495   -0.0451 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2602   -0.1866   -0.2361 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7275   -0.8060    0.9389 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6311   -1.0359    0.9998 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1933   -2.1051    1.6648 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3598   -2.9923    2.3029 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5623   -2.2708    1.6829 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3936   -1.3743    1.0388 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7632   -1.5046    1.0335 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3093   -2.4551    1.6216 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4952   -0.5501    0.3580 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8935   -0.6171    0.3092 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6349    0.3332   -0.3642 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9856    1.3697   -1.0019 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5877    1.4376   -0.9538 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8556    0.4877   -0.2813 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5545    0.5785   -0.2546 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8349   -0.3155    0.3804 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4605   -0.1424    0.3579 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8764    0.9205   -0.3013 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4855    1.0129   -0.6610 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4994    1.1731   -2.1864 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2135    2.3422   -2.4548 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4573   -0.9679    0.4986 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8145   -0.8553    0.7229 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5544   -1.9218    1.2802 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8381   -3.0967    1.5921 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4549    0.3204    0.3957 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8150    0.4487    0.6145 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2418    4.4060   -1.4334 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9071    4.0476   -0.2607 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9685    3.2410   -1.9232 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8042    2.0166   -0.7815 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1677   -0.9578   -1.0484 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7486   -3.7827    2.7963 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0356   -3.1054    2.1997 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3854   -1.4282    0.8093 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7173    0.2956   -0.4113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5623    2.1163   -1.5306 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0601    2.2312   -1.4400 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8588    1.9539   -0.1857 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1456    0.3375   -2.5814 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5034    1.1583   -2.6036 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0312    2.3034   -1.8938 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9999   -1.9255    0.7777 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5115   -3.8237    2.1020 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0156   -2.8220    2.3118 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4244   -3.5900    0.6842 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2847    1.3152    0.3729 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5 28  2  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 29 32  2  0
 32 33  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
  9 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 32  3  1  0
 25  6  1  0
 23  8  1  0
 22 12  1  0
 20 15  1  0
  1 34  1  0
  1 35  1  0
  1 36  1  0
  4 37  1  0
 28 49  1  0
 31 50  1  0
 31 51  1  0
 31 52  1  0
 33 53  1  0
  6 38  1  6
 10 39  1  0
 11 40  1  0
 16 41  1  0
 17 42  1  0
 18 43  1  0
 19 44  1  0
 25 45  1  1
 26 46  1  0
 26 47  1  0
 27 48  1  0
M  END


  Mrv1652304292204582D          

 33 37  0  0  1  0            999 V2000
    3.9550    1.0361    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6850    0.2566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2251   -0.3671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0352   -0.2111    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3052    0.5684    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.7651    1.1921    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.0352    1.9716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4951    2.5952    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1154    0.7243    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3854    1.5039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1955    1.6598    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7356    1.0361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4656    0.2566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6555    0.1007    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0057   -0.3671    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.8158   -0.2111    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5458    1.1921    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.4656    2.4393    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.2757    2.5952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9550   -1.1466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1449   -1.3025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6048   -0.6789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8748    0.1007    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3347    0.7243    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5246    0.5684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2546   -0.2111    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7946   -0.8348    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5246   -1.6143    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4444   -0.3671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0957    0.2566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1744    1.0361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9845    1.1921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4951   -1.7702    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  6  0  0  0
  7  8  1  0  0  0  0
  5  9  1  1  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
  9 14  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 12 17  1  0  0  0  0
 11 18  1  0  0  0  0
 18 19  1  0  0  0  0
  3 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
  2 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 22 27  1  0  0  0  0
 27 28  2  0  0  0  0
 26 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 31 32  1  0  0  0  0
 25 32  2  0  0  0  0
 20 33  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0081909

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC(=CC(OC)=C1O)[C@H]1OC2=C(O)C=C3C(=O)C4=CC=CC=C4OC3=C2O[C@@H]1CO

> <INCHI_IDENTIFIER>
InChI=1S/C24H20O9/c1-29-16-7-11(8-17(30-2)20(16)28)21-18(10-25)32-24-22-13(9-14(26)23(24)33-21)19(27)12-5-3-4-6-15(12)31-22/h3-9,18,21,25-26,28H,10H2,1-2H3/t18-,21-/m1/s1

> <INCHI_KEY>
UCBWYFQQXLZEPP-WIYYLYMNSA-N

> <FORMULA>
C24H20O9

> <MOLECULAR_WEIGHT>
452.415

> <EXACT_MASS>
452.110732224

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
53

> <JCHEM_AVERAGE_POLARIZABILITY>
45.695137054456026

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2R,3R)-12-hydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-3,10-dihydro-2H-1,4,5-trioxatetraphen-10-one

> <ALOGPS_LOGP>
2.90

> <JCHEM_LOGP>
2.704204816333333

> <ALOGPS_LOGS>
-4.17

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
9.762822622254943

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.116666101630608

> <JCHEM_PKA_STRONGEST_BASIC>
-2.990496526248698

> <JCHEM_POLAR_SURFACE_AREA>
123.91000000000001

> <JCHEM_REFRACTIVITY>
114.90719999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.08e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R,3R)-12-hydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-2,3-dihydro-1,4,5-trioxatetraphen-10-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 29-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   29-APR-22         0                                  
HETATM    1  O   UNK     0       7.383   1.934   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0       6.879   0.479   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       7.887  -0.685   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       9.399  -0.394   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       9.903   1.061   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       8.895   2.225   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       9.399   3.680   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       8.391   4.844   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      11.415   1.352   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      11.919   2.807   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      13.432   3.098   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      14.440   1.934   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      13.936   0.479   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      12.424   0.188   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      14.944  -0.685   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      16.456  -0.394   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      15.952   2.225   0.000  0.00  0.00           O+0
HETATM   18  O   UNK     0      13.936   4.553   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0      15.448   4.844   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       7.383  -2.140   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       5.870  -2.431   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.862  -1.267   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       5.366   0.188   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       4.358   1.352   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       2.846   1.061   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       2.342  -0.394   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       3.350  -1.558   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       2.846  -3.013   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       0.830  -0.685   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -0.179   0.479   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       0.326   1.934   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       1.838   2.225   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0       8.391  -3.304   0.000  0.00  0.00           O+0
CONECT    1    2    6                                                       
CONECT    2    1    3   23                                                  
CONECT    3    2    4   20                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6    9                                                  
CONECT    6    5    1    7                                                  
CONECT    7    6    8                                                       
CONECT    8    7                                                            
CONECT    9    5   10   14                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   18                                                  
CONECT   12   11   13   17                                                  
CONECT   13   12   14   15                                                  
CONECT   14   13    9                                                       
CONECT   15   13   16                                                       
CONECT   16   15                                                            
CONECT   17   12                                                            
CONECT   18   11   19                                                       
CONECT   19   18                                                            
CONECT   20    3   21   33                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23   27                                                  
CONECT   23   22    2   24                                                  
CONECT   24   23   25                                                       
CONECT   25   24   26   32                                                  
CONECT   26   25   27   29                                                  
CONECT   27   26   22   28                                                  
CONECT   28   27                                                            
CONECT   29   26   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   25                                                       
CONECT   33   20                                                            
MASTER        0    0    0    0    0    0    0    0   33    0   74    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₄H₂₀O₉

Average Mass

452.4150 Da

Monoisotopic Mass

452.11073 Da

IUPAC Name

(2R,3R)-12-hydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-3,10-dihydro-2H-1,4,5-trioxatetraphen-10-one

Traditional Name

(2R,3R)-12-hydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-2,3-dihydro-1,4,5-trioxatetraphen-10-one

CAS Registry Number

Not Available

SMILES

COC1=CC(=CC(OC)=C1O)[C@H]1OC2=C(O)C=C3C(=O)C4=CC=CC=C4OC3=C2O[C@@H]1CO

InChI Identifier

InChI=1S/C24H20O9/c1-29-16-7-11(8-17(30-2)20(16)28)21-18(10-25)32-24-22-13(9-14(26)23(24)33-21)19(27)12-5-3-4-6-15(12)31-22/h3-9,18,21,25-26,28H,10H2,1-2H3/t18-,21-/m1/s1

InChI Key

UCBWYFQQXLZEPP-WIYYLYMNSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Hypericum chinense	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenylbenzo-1,4-dioxanes. These are benzo-1,3-dioxanes having a phenyl group attached to the 1,4-dioxane moiety.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Benzodioxanes

Sub Class

Phenylbenzodioxanes

Direct Parent

Phenylbenzo-1,4-dioxanes

Alternative Parents

Substituents

2-phenylbenzo-1,4-dioxane
Xanthone
Dibenzopyran
Xanthene
Chromone
Benzo-1,4-dioxane
Benzopyran
Methoxyphenol
1-benzopyran
Dimethoxybenzene
M-dimethoxybenzene
Methoxybenzene
Phenol ether
Anisole
Phenoxy compound
Pyranone
Phenol
Alkyl aryl ether
1-hydroxy-2-unsubstituted benzenoid
Pyran
Monocyclic benzene moiety
Benzenoid
Para-dioxin
Heteroaromatic compound
Oxacycle
Ether
Hydrocarbon derivative
Organooxygen compound
Organic oxygen compound
Primary alcohol
Alcohol
Organic oxide
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.9	ALOGPS
logP	2.7	ChemAxon
logS	-4.2	ALOGPS
pKa (Strongest Acidic)	9.12	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	123.91 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	114.91 m³·mol⁻¹	ChemAxon
Polarizability	45.7 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

14374969

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for (+)-Subalatin (NP0081909)

MOL for NP0081909 ((+)-Subalatin)

3D MOL for NP0081909 ((+)-Subalatin)

3D SDF for NP0081909 ((+)-Subalatin)

3D-SDF for NP0081909 ((+)-Subalatin)

PDB for NP0081909 ((+)-Subalatin)

3D PDB for NP0081909 ((+)-Subalatin)

SMILES for NP0081909 ((+)-Subalatin)

INCHI for NP0081909 ((+)-Subalatin)

Structure for NP0081909 ((+)-Subalatin)

3D Structure for NP0081909 ((+)-Subalatin)