NP-MRD: Showing NP-Card for Cycloshermilamine D (NP0081256)

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Record Information

Version

2.0

Created at

2022-04-29 02:12:58 UTC

Updated at

2022-04-29 02:12:58 UTC

NP-MRD ID

NP0081256

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Cycloshermilamine D

Description

21-(Dimethylamino)-17-thia-1,11,14-triazahexacyclo[10.9.2.0²,⁷.0⁸,²³.0¹³,¹⁸.0¹⁹,²²]Tricosa-2,4,6,8(23),9,11,13(18),14,19(22),20-decaen-15-ol belongs to the class of organic compounds known as ergosterols and derivatives. These are steroids containing ergosta-5,7,22-trien-3beta-ol or a derivative thereof, which is based on the 3beta-hydroxylated ergostane skeleton. Cycloshermilamine D is found in Cystodytes violatinctus. 21-(Dimethylamino)-17-thia-1,11,14-triazahexacyclo[10.9.2.0²,⁷.0⁸,²³.0¹³,¹⁸.0¹⁹,²²]Tricosa-2,4,6,8(23),9,11,13(18),14,19(22),20-decaen-15-ol is a strong basic compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004151518222D          

 27 32  0  0  0  0            999 V2000
    7.6177   -1.6610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8107   -1.8326    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.5558   -2.6172    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2587   -1.2195    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4382   -1.3057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    2.0625    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -0.4125    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
  7 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 19 24  1  0  0  0  0
 24 25  1  0  0  0  0
  4 25  1  0  0  0  0
 25 26  1  0  0  0  0
  6 26  1  0  0  0  0
 26 27  2  0  0  0  0
 14 27  1  0  0  0  0
 18 27  1  0  0  0  0
M  END

     RDKit          3D

 43 48  0  0  0  0  0  0  0  0999 V2000
   -3.2471   -2.2791    1.5860 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5441   -2.0709    0.3061 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2619   -2.6343   -0.8496 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3028   -1.4253    0.2244 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0931   -2.1398    0.3289 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9538   -1.2590    0.2140 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3369   -1.2878    0.2256 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0685   -0.1494    0.0737 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4072    1.0809   -0.0985 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0706    2.2258   -0.2518 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.3984    3.4066   -0.4174 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0232    3.4881   -0.4362 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3378    2.3176   -0.2796 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0381    2.2155   -0.2733 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7989    3.3444   -0.4326 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1821    3.2584   -0.4289 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8215    2.0510   -0.2670 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0612    0.8981   -0.1043 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7042    0.9898   -0.1090 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9816   -0.1419    0.0502 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.3800   -0.0401    0.0438 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0348    1.1245   -0.1121 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4872   -0.1537    0.0816 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.3010   -1.2861    0.2405 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4860   -1.1401    0.6471 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8573   -2.6736   -0.0420 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1245   -2.8960    0.4512 S   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3786   -3.3705    1.6917 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5642   -1.9248    2.3985 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2045   -1.7585    1.5902 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7914   -2.3516   -1.7940 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2783   -2.1665   -0.8283 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4090   -3.7116   -0.7044 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0387   -3.2042    0.4755 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0283    4.2907   -0.5351 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5208    4.4075   -0.5651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3381    4.2995   -0.5610 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7923    4.1419   -0.5537 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8872    1.9780   -0.2632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6297    0.0020    0.0149 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9602    0.7745   -0.0429 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9723   -2.8417   -1.1511 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5224   -3.3886    0.4570 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  2  0
  7 27  1  0
 27 26  1  0
 26 24  1  0
 24 25  2  0
 24 23  1  0
 23  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  1  0
 21 22  2  0
 20  4  1  0
 21  6  1  0
  8  7  1  0
 22  9  1  0
 22 13  1  0
 19 14  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  3 31  1  0
  3 32  1  0
  3 33  1  0
  5 34  1  0
 26 42  1  0
 26 43  1  0
 23 41  1  0
 11 35  1  0
 12 36  1  0
 15 37  1  0
 16 38  1  0
 17 39  1  0
 18 40  1  0
M  END


  Mrv1533004151518222D          

 27 32  0  0  0  0            999 V2000
    7.6177   -1.6610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8107   -1.8326    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.5558   -2.6172    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2587   -1.2195    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4382   -1.3057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    2.0625    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -0.4125    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
  7 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 19 24  1  0  0  0  0
 24 25  1  0  0  0  0
  4 25  1  0  0  0  0
 25 26  1  0  0  0  0
  6 26  1  0  0  0  0
 26 27  2  0  0  0  0
 14 27  1  0  0  0  0
 18 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0081256

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CN(C)C1=CC2=C3SCC(=O)NC3=C3N=CC=C4C5=CC=CC=C5N1C2=C34

> <INCHI_IDENTIFIER>
InChI=1S/C21H16N4OS/c1-24(2)16-9-13-20-17-12(11-5-3-4-6-14(11)25(16)20)7-8-22-18(17)19-21(13)27-10-15(26)23-19/h3-9H,10H2,1-2H3,(H,23,26)

> <INCHI_KEY>
GPZYPHQBECMNGO-UHFFFAOYSA-N

> <FORMULA>
C21H16N4OS

> <MOLECULAR_WEIGHT>
372.45

> <EXACT_MASS>
372.104482325

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
43

> <JCHEM_AVERAGE_POLARIZABILITY>
40.408763328803886

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
21-(dimethylamino)-17-thia-1,11,14-triazahexacyclo[10.9.2.0²,⁷.0⁸,²³.0¹³,¹⁸.0¹⁹,²²]tricosa-2,4,6,8,10,12,18,20,22-nonaen-15-one

> <ALOGPS_LOGP>
3.38

> <JCHEM_LOGP>
2.571277986

> <ALOGPS_LOGS>
-5.28

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.326782695368673

> <JCHEM_PKA_STRONGEST_BASIC>
4.059090388711161

> <JCHEM_POLAR_SURFACE_AREA>
49.64

> <JCHEM_REFRACTIVITY>
111.04620000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.97e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
21-(dimethylamino)-17-thia-1,11,14-triazahexacyclo[10.9.2.0²,⁷.0⁸,²³.0¹³,¹⁸.0¹⁹,²²]tricosa-2,4,6,8,10,12,18,20,22-nonaen-15-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-APR-15         0                                  
HETATM    1  C   UNK     0      14.220  -3.101   0.000  0.00  0.00           C+0
HETATM    2  N   UNK     0      12.713  -3.421   0.000  0.00  0.00           N+0
HETATM    3  C   UNK     0      12.238  -4.885   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      11.683  -2.276   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      10.151  -2.437   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       9.336  -0.770   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.002   0.000   0.000  0.00  0.00           C+0
HETATM    8  S   UNK     0       6.668  -0.770   0.000  0.00  0.00           S+0
HETATM    9  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       4.001   2.310   0.000  0.00  0.00           O+0
HETATM   12  N   UNK     0       6.668   2.310   0.000  0.00  0.00           N+0
HETATM   13  C   UNK     0       8.002   1.540   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       9.336   2.310   0.000  0.00  0.00           C+0
HETATM   15  N   UNK     0       9.336   3.850   0.000  0.00  0.00           N+0
HETATM   16  C   UNK     0      10.669   4.620   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      12.003   3.850   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      12.003   2.310   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      13.337   1.540   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      14.670   2.310   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      16.004   1.540   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      16.004   0.000   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      14.670  -0.770   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      13.337   0.000   0.000  0.00  0.00           C+0
HETATM   25  N   UNK     0      12.003  -0.770   0.000  0.00  0.00           N+0
HETATM   26  C   UNK     0      10.669   0.000   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      10.669   1.540   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5   25                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7   26                                                  
CONECT    7    6    8   13                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13                                                       
CONECT   13   12    7   14                                                  
CONECT   14   13   15   27                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   27                                                  
CONECT   19   18   20   24                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   19   25                                                  
CONECT   25   24    4   26                                                  
CONECT   26   25    6   27                                                  
CONECT   27   26   14   18                                                  
MASTER        0    0    0    0    0    0    0    0   27    0   64    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₁H₁₆N₄OS

Average Mass

372.4500 Da

Monoisotopic Mass

372.10448 Da

IUPAC Name

21-(dimethylamino)-17-thia-1,11,14-triazahexacyclo[10.9.2.0²,⁷.0⁸,²³.0¹³,¹⁸.0¹⁹,²²]tricosa-2,4,6,8,10,12,18,20,22-nonaen-15-one

Traditional Name

21-(dimethylamino)-17-thia-1,11,14-triazahexacyclo[10.9.2.0²,⁷.0⁸,²³.0¹³,¹⁸.0¹⁹,²²]tricosa-2,4,6,8,10,12,18,20,22-nonaen-15-one

CAS Registry Number

Not Available

SMILES

CN(C)C1=CC2=C3SCC(=O)NC3=C3N=CC=C4C5=CC=CC=C5N1C2=C34

InChI Identifier

InChI=1S/C21H16N4OS/c1-24(2)16-9-13-20-17-12(11-5-3-4-6-14(11)25(16)20)7-8-22-18(17)19-21(13)27-10-15(26)23-19/h3-9H,10H2,1-2H3,(H,23,26)

InChI Key

GPZYPHQBECMNGO-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Cystodytes violatinctus	Animalia	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as ergosterols and derivatives. These are steroids containing ergosta-5,7,22-trien-3beta-ol or a derivative thereof, which is based on the 3beta-hydroxylated ergostane skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Ergostane steroids

Direct Parent

Ergosterols and derivatives

Alternative Parents

Substituents

Ergosterol-skeleton
Oxosteroid
3-oxosteroid
Cyclohexenone
Cyclic ketone
Ketone
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.38	ALOGPS
logP	2.57	ChemAxon
logS	-5.3	ALOGPS
pKa (Strongest Acidic)	11.33	ChemAxon
pKa (Strongest Basic)	4.06	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	49.64 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	111.05 m³·mol⁻¹	ChemAxon
Polarizability	40.41 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11793651

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Cycloshermilamine D (NP0081256)

MOL for NP0081256 (Cycloshermilamine D)

3D MOL for NP0081256 (Cycloshermilamine D)

3D SDF for NP0081256 (Cycloshermilamine D)

3D-SDF for NP0081256 (Cycloshermilamine D)

PDB for NP0081256 (Cycloshermilamine D)

3D PDB for NP0081256 (Cycloshermilamine D)

SMILES for NP0081256 (Cycloshermilamine D)

INCHI for NP0081256 (Cycloshermilamine D)

Structure for NP0081256 (Cycloshermilamine D)

3D Structure for NP0081256 (Cycloshermilamine D)