NP-MRD: Showing NP-Card for (+)-Vibsanin Q (NP0079351)

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Record Information

Version

2.0

Created at

2022-04-29 00:22:56 UTC

Updated at

2022-04-29 00:22:56 UTC

NP-MRD ID

NP0079351

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(+)-Vibsanin Q

Description

(1R,2R,5S,7E,11S)-8-(hydroxymethyl)-5-[(2E)-4-methoxy-4-methylpent-2-en-1-yl]-1,5-dimethyl-12-oxabicyclo[9.1.0]Dodeca-3,7-dien-2-yl 3-methylbut-2-enoate belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid. (+)-Vibsanin Q is found in Viburnum awabuki. Based on a literature review very few articles have been published on (1R,2R,5S,7E,11S)-8-(hydroxymethyl)-5-[(2E)-4-methoxy-4-methylpent-2-en-1-yl]-1,5-dimethyl-12-oxabicyclo[9.1.0]Dodeca-3,7-dien-2-yl 3-methylbut-2-enoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304292202222D          

 31 32  0  0  1  0            999 V2000
    1.2561   -1.2829    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.0878   -0.9315    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4698   -0.2003    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2833   -0.3377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4040   -1.1538    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0741   -1.7587    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9368   -2.5722    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1636   -2.8600    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5278   -2.3343    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7546   -2.6221    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1188   -2.0964    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4830   -1.5707    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0262   -3.6735    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2531   -3.9613    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9918   -0.5749    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2116   -0.9854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4695   -0.2017    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2772   -0.0333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5351    0.7504    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7515    1.0083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3187    0.4924    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7930    1.5340    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6006    1.7025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5287   -0.3249    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7746    0.4627    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5795    0.6435    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2155    1.0693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4614    1.8568    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9023    2.4635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2663    2.0377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9516   -0.5162    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  1 11  1  0  0  0  0
 11 12  1  6  0  0  0
  1 12  1  0  0  0  0
  8 13  1  0  0  0  0
 13 14  1  0  0  0  0
  5 15  1  6  0  0  0
  5 16  1  1  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
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  2 24  1  1  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  2  0  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
  1 31  1  6  0  0  0
M  END

     RDKit          3D

 71 72  0  0  0  0  0  0  0  0999 V2000
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    3.6511   -1.2573    1.5282 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7222   -1.4046    0.4971 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3272   -1.9889    1.5045 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5766   -2.2951    2.7469 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7745   -2.3546    1.4195 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5296    1.4819   -0.6594 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4705    2.2985   -1.8784 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5151    2.0444    0.1699 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2890    2.0111    0.7346 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2142    3.0053    0.6408 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0515    2.5393    1.5247 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2222    2.5501    0.7967 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    3.7246    0.8668 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5370    3.9315    2.1848 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5552    1.5342    0.0741 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7267    0.2642   -0.0988 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6308   -3.5457   -1.7490 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0066   -3.7389   -0.0901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8285   -3.5162   -1.4019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2592   -2.2549    1.4684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5549   -2.9483    1.3760 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.0504   -2.4619   -0.0895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5596   -0.0311   -1.7654 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1806   -2.0613   -1.3199 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.8485    2.0468   -1.7489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1414    1.1183   -2.4966 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5713    1.0987   -3.3129 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4408   -1.2753   -3.1043 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5843   -1.2247   -2.4127 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0674   -0.3479    0.3940 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3288   -1.2019   -0.3989 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2709   -2.7826    3.4898 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7536   -3.0039    2.5726 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2585   -1.3261    3.1955 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1259   -2.6451    2.4252 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9411   -3.2186    0.7488 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3822   -1.4772    1.1092 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2863    3.3626   -1.6736 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3840    2.2766   -2.5112 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6544    1.9410   -2.5373 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.4920   -0.4535    0.3966 H   0  0  0  0  0  0  0  0  0  0  0  0
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  3  2  1  6
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 31 30  1  0
 30 27  2  0
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 18 20  1  0
 13 12  1  0
 12 11  2  0
 11  9  1  0
 21 24  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  4 35  1  0
  4 36  1  0
  4 37  1  0
  5 38  1  0
  5 39  1  0
  5 40  1  0
  6 41  1  0
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 26 64  1  0
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 25 62  1  0
 25 63  1  0
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 12 49  1  0
 11 48  1  0
M  END


  Mrv1652304292202222D          

 31 32  0  0  1  0            999 V2000
    1.2561   -1.2829    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.0878   -0.9315    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4698   -0.2003    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2833   -0.3377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4040   -1.1538    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
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    1.1188   -2.0964    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4830   -1.5707    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0262   -3.6735    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.9918   -0.5749    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2116   -0.9854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4695   -0.2017    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2772   -0.0333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5351    0.7504    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7515    1.0083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3187    0.4924    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7930    1.5340    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6006    1.7025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5287   -0.3249    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7746    0.4627    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5795    0.6435    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2155    1.0693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4614    1.8568    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9023    2.4635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2663    2.0377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9516   -0.5162    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
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  8  9  1  0  0  0  0
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  1 11  1  0  0  0  0
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  1 12  1  0  0  0  0
  8 13  1  0  0  0  0
 13 14  1  0  0  0  0
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  5 16  1  1  0  0  0
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 17 18  2  0  0  0  0
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 22 23  1  0  0  0  0
  2 24  1  1  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  2  0  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
  1 31  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0079351

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(C)(C)\C=C\C[C@@]1(C)C\C=C(CO)/CC[C@@H]2O[C@@]2(C)[C@H](OC(=O)C=C(C)C)\C=C/1

> <INCHI_IDENTIFIER>
InChI=1S/C26H40O5/c1-19(2)17-23(28)30-21-12-16-25(5,14-8-13-24(3,4)29-7)15-11-20(18-27)9-10-22-26(21,6)31-22/h8,11-13,16-17,21-22,27H,9-10,14-15,18H2,1-7H3/b13-8+,16-12-,20-11+/t21-,22+,25+,26+/m1/s1

> <INCHI_KEY>
TVVRWBNLBVCRPH-SNSVSIAKSA-N

> <FORMULA>
C26H40O5

> <MOLECULAR_WEIGHT>
432.601

> <EXACT_MASS>
432.287574388

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
71

> <JCHEM_AVERAGE_POLARIZABILITY>
49.55218428364439

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,2R,3Z,5S,7E,11S)-8-(hydroxymethyl)-5-[(2E)-4-methoxy-4-methylpent-2-en-1-yl]-1,5-dimethyl-12-oxabicyclo[9.1.0]dodeca-3,7-dien-2-yl 3-methylbut-2-enoate

> <ALOGPS_LOGP>
5.09

> <JCHEM_LOGP>
4.869769687999999

> <ALOGPS_LOGS>
-5.10

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
16.884732323765203

> <JCHEM_PKA_STRONGEST_BASIC>
-1.969337081127641

> <JCHEM_POLAR_SURFACE_AREA>
68.28999999999999

> <JCHEM_REFRACTIVITY>
127.54839999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.41e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,3Z,5S,7E,11S)-8-(hydroxymethyl)-5-[(2E)-4-methoxy-4-methylpent-2-en-1-yl]-1,5-dimethyl-12-oxabicyclo[9.1.0]dodeca-3,7-dien-2-yl 3-methylbut-2-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 29-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   29-APR-22         0                                  
HETATM    1  C   UNK     0       2.345  -2.395   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.897  -1.739   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.610  -0.374   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.129  -0.630   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       6.354  -2.154   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       7.605  -3.283   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       7.349  -4.801   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.905  -5.339   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.719  -4.357   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.275  -4.895   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.088  -3.913   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       0.902  -2.932   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       5.649  -6.857   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       4.206  -7.394   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       7.451  -1.073   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       7.862  -1.839   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       8.343  -0.377   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       9.851  -0.062   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      10.332   1.401   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       8.869   1.882   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      11.795   0.919   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      10.814   2.864   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      12.321   3.178   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       2.854  -0.606   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       3.313   0.864   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       4.815   1.201   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0       2.269   1.996   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       2.728   3.466   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       1.684   4.599   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       4.230   3.804   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       1.776  -0.964   0.000  0.00  0.00           C+0
CONECT    1    2   11   12   31                                             
CONECT    2    1    3   24                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6   15   16                                             
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   13                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10    1   12                                                  
CONECT   12   11    1                                                       
CONECT   13    8   14                                                       
CONECT   14   13                                                            
CONECT   15    5                                                            
CONECT   16    5   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   21   22                                             
CONECT   20   19                                                            
CONECT   21   19                                                            
CONECT   22   19   23                                                       
CONECT   23   22                                                            
CONECT   24    2   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28                                                       
CONECT   28   27   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28                                                            
CONECT   31    1                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   64    0
END

View in JSmol

Synonyms

Value	Source
(1R,2R,5S,7E,11S)-8-(Hydroxymethyl)-5-[(2E)-4-methoxy-4-methylpent-2-en-1-yl]-1,5-dimethyl-12-oxabicyclo[9.1.0]dodeca-3,7-dien-2-yl 3-methylbut-2-enoic acid	Generator

Chemical Formula

C₂₆H₄₀O₅

Average Mass

432.6010 Da

Monoisotopic Mass

432.28757 Da

IUPAC Name

(1R,2R,3Z,5S,7E,11S)-8-(hydroxymethyl)-5-[(2E)-4-methoxy-4-methylpent-2-en-1-yl]-1,5-dimethyl-12-oxabicyclo[9.1.0]dodeca-3,7-dien-2-yl 3-methylbut-2-enoate

Traditional Name

(1R,2R,3Z,5S,7E,11S)-8-(hydroxymethyl)-5-[(2E)-4-methoxy-4-methylpent-2-en-1-yl]-1,5-dimethyl-12-oxabicyclo[9.1.0]dodeca-3,7-dien-2-yl 3-methylbut-2-enoate

CAS Registry Number

Not Available

SMILES

COC(C)(C)\C=C\C[C@@]1(C)C\C=C(CO)/CC[C@@H]2O[C@@]2(C)[C@H](OC(=O)C=C(C)C)\C=C/1

InChI Identifier

InChI=1S/C26H40O5/c1-19(2)17-23(28)30-21-12-16-25(5,14-8-13-24(3,4)29-7)15-11-20(18-27)9-10-22-26(21,6)31-22/h8,11-13,16-17,21-22,27H,9-10,14-15,18H2,1-7H3/b13-8+,16-12-,20-11+/t21-,22+,25+,26+/m1/s1

InChI Key

TVVRWBNLBVCRPH-SNSVSIAKSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Viburnum awabuki	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acid esters

Direct Parent

Fatty acid esters

Alternative Parents

Substituents

Fatty acid ester
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Carboxylic acid ester
Oxacycle
Organoheterocyclic compound
Monocarboxylic acid or derivatives
Ether
Oxirane
Dialkyl ether
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.09	ALOGPS
logP	4.87	ChemAxon
logS	-5.1	ALOGPS
pKa (Strongest Acidic)	16.88	ChemAxon
pKa (Strongest Basic)	-2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	68.29 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	127.55 m³·mol⁻¹	ChemAxon
Polarizability	49.55 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

58134118

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163064859

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for (+)-Vibsanin Q (NP0079351)

MOL for NP0079351 ((+)-Vibsanin Q)

3D MOL for NP0079351 ((+)-Vibsanin Q)

3D SDF for NP0079351 ((+)-Vibsanin Q)

3D-SDF for NP0079351 ((+)-Vibsanin Q)

PDB for NP0079351 ((+)-Vibsanin Q)

3D PDB for NP0079351 ((+)-Vibsanin Q)

SMILES for NP0079351 ((+)-Vibsanin Q)

INCHI for NP0079351 ((+)-Vibsanin Q)

Structure for NP0079351 ((+)-Vibsanin Q)

3D Structure for NP0079351 ((+)-Vibsanin Q)