NP-MRD: Showing NP-Card for (-)-Rhizochalin C (NP0077061)

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Record Information

Version

2.0

Created at

2022-04-28 22:14:09 UTC

Updated at

2022-04-28 22:14:09 UTC

NP-MRD ID

NP0077061

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(-)-Rhizochalin C

Description

(2R,3R,26R,27R)-2,27-diamino-3,28-dihydroxy-26-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}octacosan-11-one belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol. (-)-Rhizochalin C is found in Rhizochalina incrustata. Based on a literature review very few articles have been published on (2R,3R,26R,27R)-2,27-diamino-3,28-dihydroxy-26-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}octacosan-11-one.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304292200142D          

 45 45  0  0  1  0            999 V2000
    2.3663    3.0403    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4283    3.8630    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1717    4.2207    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8532    3.7557    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.7912    2.9330    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0478    2.5753    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9858    1.7526    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6673    1.2877    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.6053    0.4650    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2868    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2249   -0.8227    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8619    0.1073    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.4107    1.6453    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0922    1.1804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8356    1.5380    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5171    1.0730    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2605    1.4307    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9420    0.9657    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6855    1.3234    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3669    0.8584    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1104    1.2161    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7918    0.7511    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5353    1.1088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2167    0.6438    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9602    1.0015    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6417    0.5365    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3851    0.8942    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.4470    1.7169    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.0666    0.4292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.8100    0.7869    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4915    0.3219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.2349    0.6796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9164    0.2146    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6598    0.5723    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.3413    0.1073    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0847    0.4650    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   20.7662    0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   21.5096    0.3577    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   20.7042   -0.8227    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.1467    1.2877    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5966    4.1134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2781    3.6484    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2336    5.0433    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7468    4.3280    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6229    2.6826    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  6  0  0  0
  8  7  1  6  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  9 12  1  1  0  0  0
  8 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  6  0  0  0
 37 39  1  0  0  0  0
 36 40  1  1  0  0  0
  4 41  1  1  0  0  0
 41 42  1  0  0  0  0
  3 43  1  6  0  0  0
  2 44  1  1  0  0  0
  1 45  1  6  0  0  0
M  END

     RDKit          3D

113113  0  0  0  0  0  0  0  0999 V2000
   12.4996   -2.4058   -2.1262 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8218   -1.7500   -0.9597 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.4664   -0.3707   -1.2491 N   0  0  0  0  0  0  0  0  0  0  0  0
   10.5770   -2.5374   -0.6094 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.9424   -3.8369   -0.3512 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.5559   -2.4413   -1.7007 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2968   -3.2177   -1.3871 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6490   -2.7355   -0.1123 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2807   -1.2661   -0.1713 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6462   -0.7906    1.0927 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3659   -1.4645    1.4616 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2897   -1.2557    0.4025 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0228    0.1955    0.2164 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6384    0.8353   -0.6107 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9966    0.9382    1.0295 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.1463    0.6823    2.6876 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2126    1.7410    2.2781 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7473    3.0501    1.8404 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3764    4.0303    1.5026 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2763    3.5040    0.3879 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5328    3.2705   -0.8662 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2376    2.7281   -2.0417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3072    3.4656   -2.7192 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5059    3.8116   -1.9361 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1936    2.6040   -1.3306 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3779    3.1140   -0.5182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1384    2.0078    0.1222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7267    0.9703   -0.7647 C   0  0  1  0  0  0  0  0  0  0  0  0
   -7.3591    0.0503    0.1662 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -6.0184   -1.5330    1.1670 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7539   -1.9179    2.2566 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.7370   -2.4652    3.2737 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8250   -1.4689    3.6156 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6809   -3.0844    1.9541 C   0  0  1  0  0  0  0  0  0  0  0  0
   -9.0119   -2.6720    2.0971 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4885   -3.4777    0.5060 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.2536   -4.0043    0.2245 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7842   -2.2194   -0.3245 C   0  0  1  0  0  0  0  0  0  0  0  0
   -9.0676   -1.8167    0.1073 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -8.3305    0.0901   -2.2593 N   0  0  0  0  0  0  0  0  0  0  0  0
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   -8.6093    2.2158   -3.7069 O   0  0  0  0  0  0  0  0  0  0  0  0
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  2  3  1  0
  2  4  1  0
  4  5  1  0
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  6  7  1  0
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 31 32  1  0
 32 33  1  0
 33 34  1  0
 34 35  1  0
 33 36  1  0
 36 37  1  0
 36 38  1  0
 38 39  1  0
 38 40  1  0
 40 41  1  0
 29 42  1  0
 42 43  1  0
 42 44  1  0
 44 45  1  0
 40 31  1  0
  1 46  1  0
  1 47  1  0
  1 48  1  0
  2 49  1  1
  3 50  1  0
  3 51  1  0
  4 52  1  1
  5 53  1  0
  6 54  1  0
  6 55  1  0
  7 56  1  0
  7 57  1  0
  8 58  1  0
  8 59  1  0
  9 60  1  0
  9 61  1  0
 10 62  1  0
 10 63  1  0
 11 64  1  0
 11 65  1  0
 12 66  1  0
 12 67  1  0
 15 68  1  0
 15 69  1  0
 16 70  1  0
 16 71  1  0
 17 72  1  0
 17 73  1  0
 18 74  1  0
 18 75  1  0
 19 76  1  0
 19 77  1  0
 20 78  1  0
 20 79  1  0
 21 80  1  0
 21 81  1  0
 22 82  1  0
 22 83  1  0
 23 84  1  0
 23 85  1  0
 24 86  1  0
 24 87  1  0
 25 88  1  0
 25 89  1  0
 26 90  1  0
 26 91  1  0
 27 92  1  0
 27 93  1  0
 28 94  1  0
 28 95  1  0
 29 96  1  6
 31 97  1  6
 33 98  1  1
 34 99  1  0
 34100  1  0
 35101  1  0
 36102  1  1
 37103  1  0
 38104  1  6
 39105  1  0
 40106  1  6
 41107  1  0
 42108  1  1
 43109  1  0
 43110  1  0
 44111  1  0
 44112  1  0
 45113  1  0
M  END


  Mrv1652304292200142D          

 45 45  0  0  1  0            999 V2000
    2.3663    3.0403    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4283    3.8630    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1717    4.2207    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8532    3.7557    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.7912    2.9330    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0478    2.5753    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9858    1.7526    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6673    1.2877    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.6053    0.4650    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2868    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2249   -0.8227    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8619    0.1073    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.4107    1.6453    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0922    1.1804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8356    1.5380    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5171    1.0730    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2605    1.4307    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9420    0.9657    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6855    1.3234    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3669    0.8584    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1104    1.2161    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7918    0.7511    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5353    1.1088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2167    0.6438    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9602    1.0015    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6417    0.5365    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3851    0.8942    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.4470    1.7169    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.0666    0.4292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.8100    0.7869    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4915    0.3219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.2349    0.6796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9164    0.2146    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6598    0.5723    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.3413    0.1073    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0847    0.4650    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   20.7662    0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   21.5096    0.3577    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   20.7042   -0.8227    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.1467    1.2877    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5966    4.1134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2781    3.6484    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2336    5.0433    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7468    4.3280    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6229    2.6826    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  6  0  0  0
  8  7  1  6  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  9 12  1  1  0  0  0
  8 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  6  0  0  0
 37 39  1  0  0  0  0
 36 40  1  1  0  0  0
  4 41  1  1  0  0  0
 41 42  1  0  0  0  0
  3 43  1  6  0  0  0
  2 44  1  1  0  0  0
  1 45  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0077061

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@H](N)[C@H](O)CCCCCCCC(=O)CCCCCCCCCCCCCC[C@@H](O[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)[C@H](N)CO

> <INCHI_IDENTIFIER>
InChI=1S/C34H68N2O9/c1-25(35)28(40)21-17-13-10-12-16-20-26(39)19-15-11-8-6-4-2-3-5-7-9-14-18-22-29(27(36)23-37)44-34-33(43)32(42)31(41)30(24-38)45-34/h25,27-34,37-38,40-43H,2-24,35-36H2,1H3/t25-,27-,28-,29-,30-,31-,32+,33-,34+/m1/s1

> <INCHI_KEY>
LTQNHMJORFUEBP-SXZKUOSVSA-N

> <FORMULA>
C34H68N2O9

> <MOLECULAR_WEIGHT>
648.923

> <EXACT_MASS>
648.492481778

> <JCHEM_ACCEPTOR_COUNT>
11

> <JCHEM_ATOM_COUNT>
113

> <JCHEM_AVERAGE_POLARIZABILITY>
78.6469931435952

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
8

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R,3R,26R,27R)-2,27-diamino-3,28-dihydroxy-26-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}octacosan-11-one

> <ALOGPS_LOGP>
3.66

> <JCHEM_LOGP>
3.621769863666667

> <ALOGPS_LOGS>
-4.62

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
2

> <JCHEM_PKA>
13.180439629545614

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.210165162684529

> <JCHEM_PKA_STRONGEST_BASIC>
9.917195553935041

> <JCHEM_POLAR_SURFACE_AREA>
208.94999999999996

> <JCHEM_REFRACTIVITY>
174.75960000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
29

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.56e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R,3R,26R,27R)-2,27-diamino-3,28-dihydroxy-26-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}octacosan-11-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 29-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   29-APR-22         0                                  
HETATM    1  C   UNK     0       4.417   5.675   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.533   7.211   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.920   7.879   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       7.193   7.011   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       7.077   5.475   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       5.689   4.807   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       5.574   3.272   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       6.846   2.404   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.730   0.868   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       8.002   0.000   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       7.886  -1.536   0.000  0.00  0.00           O+0
HETATM   12  N   UNK     0       5.342   0.200   0.000  0.00  0.00           N+0
HETATM   13  C   UNK     0       8.233   3.071   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       9.505   2.203   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.893   2.871   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      12.165   2.003   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      13.553   2.671   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      14.825   1.803   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      16.213   2.470   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      17.485   1.602   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      18.873   2.270   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      20.145   1.402   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      21.532   2.070   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      22.805   1.202   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      24.192   1.869   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      25.464   1.002   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      26.852   1.669   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0      26.968   3.205   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0      28.124   0.801   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      29.512   1.469   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      30.784   0.601   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      32.172   1.269   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      33.444   0.401   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      34.832   1.068   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      36.104   0.200   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      37.491   0.868   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      38.764   0.000   0.000  0.00  0.00           C+0
HETATM   38  N   UNK     0      40.151   0.668   0.000  0.00  0.00           N+0
HETATM   39  C   UNK     0      38.648  -1.536   0.000  0.00  0.00           C+0
HETATM   40  O   UNK     0      37.607   2.404   0.000  0.00  0.00           O+0
HETATM   41  C   UNK     0       8.580   7.678   0.000  0.00  0.00           C+0
HETATM   42  O   UNK     0       9.852   6.810   0.000  0.00  0.00           O+0
HETATM   43  O   UNK     0       6.036   9.414   0.000  0.00  0.00           O+0
HETATM   44  O   UNK     0       3.261   8.079   0.000  0.00  0.00           O+0
HETATM   45  O   UNK     0       3.029   5.008   0.000  0.00  0.00           O+0
CONECT    1    2    6   45                                                  
CONECT    2    1    3   44                                                  
CONECT    3    2    4   43                                                  
CONECT    4    3    5   41                                                  
CONECT    5    4    6                                                       
CONECT    6    5    1    7                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   13                                                  
CONECT    9    8   10   12                                                  
CONECT   10    9   11                                                       
CONECT   11   10                                                            
CONECT   12    9                                                            
CONECT   13    8   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37   40                                                  
CONECT   37   36   38   39                                                  
CONECT   38   37                                                            
CONECT   39   37                                                            
CONECT   40   36                                                            
CONECT   41    4   42                                                       
CONECT   42   41                                                            
CONECT   43    3                                                            
CONECT   44    2                                                            
CONECT   45    1                                                            
MASTER        0    0    0    0    0    0    0    0   45    0   90    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₄H₆₈N₂O₉

Average Mass

648.9230 Da

Monoisotopic Mass

648.49248 Da

IUPAC Name

(2R,3R,26R,27R)-2,27-diamino-3,28-dihydroxy-26-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}octacosan-11-one

Traditional Name

(2R,3R,26R,27R)-2,27-diamino-3,28-dihydroxy-26-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}octacosan-11-one

CAS Registry Number

Not Available

SMILES

C[C@@H](N)[C@H](O)CCCCCCCC(=O)CCCCCCCCCCCCCC[C@@H](O[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)[C@H](N)CO

InChI Identifier

InChI=1S/C34H68N2O9/c1-25(35)28(40)21-17-13-10-12-16-20-26(39)19-15-11-8-6-4-2-3-5-7-9-14-18-22-29(27(36)23-37)44-34-33(43)32(42)31(41)30(24-38)45-34/h25,27-34,37-38,40-43H,2-24,35-36H2,1H3/t25-,27-,28-,29-,30-,31-,32+,33-,34+/m1/s1

InChI Key

LTQNHMJORFUEBP-SXZKUOSVSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Rhizochalina incrustata	-	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acyl glycosides

Direct Parent

Fatty acyl glycosides of mono- and disaccharides

Alternative Parents

Substituents

Fatty acyl glycoside of mono- or disaccharide
Hexose monosaccharide
Alkyl glycoside
O-glycosyl compound
Glycosyl compound
Oxane
Monosaccharide
Secondary alcohol
Ketone
1,2-aminoalcohol
Oxacycle
Organoheterocyclic compound
Polyol
Acetal
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Primary amine
Primary alcohol
Organooxygen compound
Organonitrogen compound
Primary aliphatic amine
Carbonyl group
Amine
Alcohol
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.66	ALOGPS
logP	3.62	ChemAxon
logS	-4.6	ALOGPS
pKa (Strongest Acidic)	12.21	ChemAxon
pKa (Strongest Basic)	9.92	ChemAxon
Physiological Charge	2	ChemAxon
Hydrogen Acceptor Count	11	ChemAxon
Hydrogen Donor Count	8	ChemAxon
Polar Surface Area	208.95 Å²	ChemAxon
Rotatable Bond Count	29	ChemAxon
Refractivity	174.76 m³·mol⁻¹	ChemAxon
Polarizability	78.65 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163010258

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for (-)-Rhizochalin C (NP0077061)

MOL for NP0077061 ((-)-Rhizochalin C)

3D MOL for NP0077061 ((-)-Rhizochalin C)

3D SDF for NP0077061 ((-)-Rhizochalin C)

3D-SDF for NP0077061 ((-)-Rhizochalin C)

PDB for NP0077061 ((-)-Rhizochalin C)

3D PDB for NP0077061 ((-)-Rhizochalin C)

SMILES for NP0077061 ((-)-Rhizochalin C)

INCHI for NP0077061 ((-)-Rhizochalin C)

Structure for NP0077061 ((-)-Rhizochalin C)

3D Structure for NP0077061 ((-)-Rhizochalin C)