NP-MRD: Showing NP-Card for Effusanin D (NP0076489)

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Record Information

Version

2.0

Created at

2022-04-28 21:39:51 UTC

Updated at

2022-04-28 21:39:52 UTC

NP-MRD ID

NP0076489

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Effusanin D

Description

Effusanin D belongs to the class of organic compounds known as kaurane diterpenoids. These are diterpene alkaloids with a structure that is based on the kaurane skeleton. Kaurane is a tetracyclic compound that arises by cyclisation of a pimarane precursor followed by rearrangement. It possesses a [3,2,1]-bicyclic ring system with C15-C16 bridge connected to C13, forming the five-membered ring D. Effusanin D is found in Isodon effusus, Isodon eriocalyx and Isodon japonicus. Effusanin D was first documented in 2008 (PMID: 18491868). Based on a literature review a small amount of articles have been published on Effusanin D.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282223392D          

 32 36  0  0  1  0            999 V2000
    7.3349   -0.7720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6004    0.0200    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9763    0.5828    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.1341    0.4235    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.8274   -0.4538    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.5193   -0.9618    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.3535   -1.7700    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9705   -2.3176    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7533   -2.0571    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8047   -3.1258    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9206   -0.6791    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3622    0.1026    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.7341    0.9050    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.6118    1.1973    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.8774    1.9784    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1845    1.5203    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4550    0.6284    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1273   -0.0775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5366    0.3968    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4488    1.2171    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8222   -0.0464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0491    0.2416    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0821   -0.8796    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.5820   -1.5689    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4244   -1.3877    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8131   -0.5412    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5371    1.1879    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2934    1.9761    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8541    2.5812    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6104    3.3694    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.6586    2.3982    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8120    1.3912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  4  3  1  6  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
  5 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
  4 14  1  0  0  0  0
 14 15  1  1  0  0  0
 13 16  1  6  0  0  0
 13 17  1  0  0  0  0
 17 18  1  0  0  0  0
  5 18  1  6  0  0  0
 12 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 11 25  1  6  0  0  0
 23 26  1  6  0  0  0
 12 26  1  6  0  0  0
  3 27  1  6  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  2  0  0  0  0
 29 31  1  0  0  0  0
  3 32  1  1  0  0  0
M  END

     RDKit          3D

 64 68  0  0  0  0  0  0  0  0999 V2000
   -5.3305   -1.7180   -1.4737 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3246   -1.3166   -0.7170 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9919   -1.8980   -0.6127 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6892   -2.9527   -1.2208 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2325   -1.0046    0.2856 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.3428   -0.5128    1.2124 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4052   -0.1266    0.2086 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9386    1.0395   -0.5756 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4693    1.3742   -0.4348 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5984    0.1777   -0.4119 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1761    0.4361    0.0927 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2521    0.3841    1.6008 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7645   -0.7848    2.0595 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1562   -1.6826    1.0696 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5591   -2.8409    1.6889 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0458   -1.9751    0.2388 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1399   -2.9324   -0.7528 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6201   -0.7307   -0.4409 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0932   -0.6693   -0.4108 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6117   -1.1795   -1.7402 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7745   -1.4153    0.6966 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1259   -1.2864    0.8149 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2242   -1.6456    0.1431 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6325   -1.3065    0.5641 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1300   -2.3047   -0.9053 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6044    0.7845   -0.3091 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6766    1.6743   -1.0870 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3007    1.7426   -0.4154 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2943    2.7686    0.5513 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3214    3.9884    0.4758 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2387    4.9635    1.5862 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9529    4.2309   -0.5759 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1671   -2.5820   -2.1006 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2820   -1.2079   -1.4716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0480    0.3103    1.8558 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7238   -1.3904    1.7887 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4053   -0.0278    0.6443 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2081    0.8949   -1.6463 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5287    1.9390   -0.2577 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3955    2.0287    0.4335 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2648    2.0004   -1.3608 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4744   -0.1544   -1.4846 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8611    1.2795    1.9071 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7352    0.5479    2.0791 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7631   -3.3894    1.8722 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7709   -2.4458    0.9436 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0207   -2.5607   -1.6687 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3061   -0.7543   -1.5379 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8317   -0.8221   -2.5117 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6688   -2.2744   -1.7861 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5002   -0.6119   -2.0169 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3007   -1.2245    1.6890 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6233   -2.5460    0.4559 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6427   -0.5499    1.3637 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1801   -0.9889   -0.3361 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0918   -2.2658    0.9027 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7837    1.0878    0.7334 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5884    0.7969   -0.8091 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6265    1.2627   -2.1130 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1398    2.6729   -1.1716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3452    2.0865   -1.2276 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4709    4.5814    2.3433 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2134    5.1018    2.0924 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1492    5.9240    1.1903 H   0  0  0  0  0  0  0  0  0  0  0  0
 24 23  1  0
 23 25  2  0
 23 22  1  0
 22 21  1  0
 19 21  1  1
 19 20  1  0
 19 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 30 32  2  0
 28 11  1  0
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 12 13  1  0
 13 14  1  0
 14 15  1  1
 14 16  1  0
 16 17  1  0
 16 18  1  0
 14  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
  7  2  1  0
  2  1  2  3
  2  3  1  0
  3  4  2  0
 18 19  1  0
 10  5  1  0
 18 11  1  0
  5  3  1  6
 10 11  1  0
 24 54  1  0
 24 55  1  0
 24 56  1  0
 21 52  1  0
 21 53  1  0
 20 49  1  0
 20 50  1  0
 20 51  1  0
 26 57  1  0
 26 58  1  0
 27 59  1  0
 27 60  1  0
 28 61  1  6
 31 62  1  0
 31 63  1  0
 31 64  1  0
 12 43  1  0
 12 44  1  0
 15 45  1  0
 16 46  1  1
 17 47  1  0
 18 48  1  6
  6 35  1  0
  6 36  1  0
  7 37  1  1
  8 38  1  0
  8 39  1  0
  9 40  1  0
  9 41  1  0
 10 42  1  6
  1 33  1  0
  1 34  1  0
M  END


  Mrv1652304282223392D          

 32 36  0  0  1  0            999 V2000
    7.3349   -0.7720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6004    0.0200    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9763    0.5828    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.1341    0.4235    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.8274   -0.4538    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.5193   -0.9618    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.3535   -1.7700    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9705   -2.3176    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7533   -2.0571    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8047   -3.1258    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9206   -0.6791    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3622    0.1026    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.7341    0.9050    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.6118    1.1973    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.8774    1.9784    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1845    1.5203    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4550    0.6284    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1273   -0.0775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5366    0.3968    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4488    1.2171    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8222   -0.0464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0491    0.2416    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0821   -0.8796    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.5820   -1.5689    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4244   -1.3877    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8131   -0.5412    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5371    1.1879    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2934    1.9761    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8541    2.5812    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6104    3.3694    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.6586    2.3982    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8120    1.3912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  4  3  1  6  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
  5 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
  4 14  1  0  0  0  0
 14 15  1  1  0  0  0
 13 16  1  6  0  0  0
 13 17  1  0  0  0  0
 17 18  1  0  0  0  0
  5 18  1  6  0  0  0
 12 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 11 25  1  6  0  0  0
 23 26  1  6  0  0  0
 12 26  1  6  0  0  0
  3 27  1  6  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  2  0  0  0  0
 29 31  1  0  0  0  0
  3 32  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0076489

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)OC[C@]1(C)CC[C@H](OC(C)=O)[C@]23CO[C@](O)([C@@H](O)[C@H]12)[C@@]12C[C@@H](CC[C@@H]31)C(=C)C2=O

> <INCHI_IDENTIFIER>
InChI=1S/C24H32O8/c1-12-15-5-6-16-22-11-31-24(29,23(16,9-15)19(12)27)20(28)18(22)21(4,10-30-13(2)25)8-7-17(22)32-14(3)26/h15-18,20,28-29H,1,5-11H2,2-4H3/t15-,16+,17+,18-,20+,21+,22-,23+,24-/m1/s1

> <INCHI_KEY>
IYWHJYKWKCMAGI-LTDHTRFUSA-N

> <FORMULA>
C24H32O8

> <MOLECULAR_WEIGHT>
448.512

> <EXACT_MASS>
448.20971799

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
64

> <JCHEM_AVERAGE_POLARIZABILITY>
45.767280366708846

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
[(1S,2S,5R,8S,9S,10S,11R,12R,15S)-15-(acetyloxy)-9,10-dihydroxy-12-methyl-6-methylidene-7-oxo-17-oxapentacyclo[7.6.2.1^{5,8}.0^{1,11}.0^{2,8}]octadecan-12-yl]methyl acetate

> <ALOGPS_LOGP>
1.06

> <JCHEM_LOGP>
1.2949451949999993

> <ALOGPS_LOGS>
-2.90

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.791609201754842

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.593123931007927

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6849817388392507

> <JCHEM_POLAR_SURFACE_AREA>
119.36000000000001

> <JCHEM_REFRACTIVITY>
110.5165

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
5.68e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[(1S,2S,5R,8S,9S,10S,11R,12R,15S)-15-(acetyloxy)-9,10-dihydroxy-12-methyl-6-methylidene-7-oxo-17-oxapentacyclo[7.6.2.1^{5,8}.0^{1,11}.0^{2,8}]octadecan-12-yl]methyl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0      13.692  -1.441   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      14.187   0.037   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      13.022   1.088   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      11.450   0.790   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      10.878  -0.847   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      12.169  -1.795   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      11.860  -3.304   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0      13.012  -4.326   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0      14.473  -3.840   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      12.702  -5.835   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       9.185  -1.268   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       8.143   0.192   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       8.837   1.689   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      10.475   2.235   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      10.971   3.693   0.000  0.00  0.00           O+0
HETATM   16  O   UNK     0       7.811   2.838   0.000  0.00  0.00           O+0
HETATM   17  O   UNK     0      10.183   1.173   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       9.571  -0.145   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       6.602   0.741   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       6.438   2.272   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       5.268  -0.087   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.825   0.451   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       5.753  -1.642   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.686  -2.929   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       8.259  -2.590   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       7.118  -1.010   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      14.069   2.217   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0      13.614   3.689   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0      14.661   4.818   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      14.206   6.290   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0      16.163   4.477   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      12.716   2.597   0.000  0.00  0.00           C+0
CONECT    1    2    6                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4   27   32                                             
CONECT    4    3    5   14                                                  
CONECT    5    4    6   11   18                                             
CONECT    6    5    1    7                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8                                                            
CONECT   11    5   12   25                                                  
CONECT   12   11   13   19   26                                             
CONECT   13   12   14   16   17                                             
CONECT   14   13    4   15                                                  
CONECT   15   14                                                            
CONECT   16   13                                                            
CONECT   17   13   18                                                       
CONECT   18   17    5                                                       
CONECT   19   12   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24   26                                                  
CONECT   24   23   25                                                       
CONECT   25   24   11                                                       
CONECT   26   23   12                                                       
CONECT   27    3   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29                                                            
CONECT   32    3                                                            
MASTER        0    0    0    0    0    0    0    0   32    0   72    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₄H₃₂O₈

Average Mass

448.5120 Da

Monoisotopic Mass

448.20972 Da

IUPAC Name

[(1S,2S,5R,8S,9S,10S,11R,12R,15S)-15-(acetyloxy)-9,10-dihydroxy-12-methyl-6-methylidene-7-oxo-17-oxapentacyclo[7.6.2.1^{5,8}.0^{1,11}.0^{2,8}]octadecan-12-yl]methyl acetate

Traditional Name

[(1S,2S,5R,8S,9S,10S,11R,12R,15S)-15-(acetyloxy)-9,10-dihydroxy-12-methyl-6-methylidene-7-oxo-17-oxapentacyclo[7.6.2.1^{5,8}.0^{1,11}.0^{2,8}]octadecan-12-yl]methyl acetate

CAS Registry Number

Not Available

SMILES

CC(=O)OC[C@]1(C)CC[C@H](OC(C)=O)[C@]23CO[C@](O)([C@@H](O)[C@H]12)[C@@]12C[C@@H](CC[C@@H]31)C(=C)C2=O

InChI Identifier

InChI=1S/C24H32O8/c1-12-15-5-6-16-22-11-31-24(29,23(16,9-15)19(12)27)20(28)18(22)21(4,10-30-13(2)25)8-7-17(22)32-14(3)26/h15-18,20,28-29H,1,5-11H2,2-4H3/t15-,16+,17+,18-,20+,21+,22-,23+,24-/m1/s1

InChI Key

IYWHJYKWKCMAGI-LTDHTRFUSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Isodon effusus	LOTUS Database	35616633
Isodon eriocalyx	LOTUS Database	35616633
Isodon japonicus	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as kaurane diterpenoids. These are diterpene alkaloids with a structure that is based on the kaurane skeleton. Kaurane is a tetracyclic compound that arises by cyclisation of a pimarane precursor followed by rearrangement. It possesses a [3,2,1]-bicyclic ring system with C15-C16 bridge connected to C13, forming the five-membered ring D.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Kaurane diterpenoids

Alternative Parents

Substituents

Kaurane diterpenoid
Dicarboxylic acid or derivatives
Oxane
Cyclic alcohol
Carboxylic acid ester
Hemiacetal
Ketone
Secondary alcohol
Carboxylic acid derivative
Oxacycle
Organoheterocyclic compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Alcohol
Carbonyl group
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.06	ALOGPS
logP	1.29	ChemAxon
logS	-2.9	ALOGPS
pKa (Strongest Acidic)	10.59	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	119.36 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	110.52 m³·mol⁻¹	ChemAxon
Polarizability	45.77 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00039085

Chemspider ID

24719826

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

44585547

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Hong SS, Lee SA, Han XH, Hwang JS, Lee C, Lee D, Hong JT, Kim Y, Lee H, Hwang BY: ent-Kaurane diterpenoids from Isodon japonicus. J Nat Prod. 2008 Jun;71(6):1055-8. doi: 10.1021/np0705965. Epub 2008 May 21. [PubMed:18491868 ]

Showing NP-Card for Effusanin D (NP0076489)

MOL for NP0076489 (Effusanin D)

3D MOL for NP0076489 (Effusanin D)

3D SDF for NP0076489 (Effusanin D)

3D-SDF for NP0076489 (Effusanin D)

PDB for NP0076489 (Effusanin D)

3D PDB for NP0076489 (Effusanin D)

SMILES for NP0076489 (Effusanin D)

INCHI for NP0076489 (Effusanin D)

Structure for NP0076489 (Effusanin D)

3D Structure for NP0076489 (Effusanin D)