NP-MRD: Showing NP-Card for (+)-Bonducellpin F (NP0076261)

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Record Information

Version

2.0

Created at

2022-04-28 21:24:46 UTC

Updated at

2022-04-28 21:24:46 UTC

NP-MRD ID

NP0076261

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(+)-Bonducellpin F

Description

Bonducellpin F belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. (+)-Bonducellpin F is found in Caesalpinia bonduc . Based on a literature review very few articles have been published on bonducellpin F.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282223242D          

 28 31  0  0  1  0            999 V2000
    3.6826    0.6076    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9629   -0.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4311   -0.7991    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7114   -1.5750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6190   -0.6539    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3387    0.1221    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8705    0.7528    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5266    0.2673    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9948   -0.3634    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2751   -1.1393    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0872   -1.2846    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3675   -2.0605    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8357   -2.6912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1160   -3.4671    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0235   -2.5460    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7433   -1.7701    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1827   -0.2182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0976    0.5577    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4342    1.1884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2463    1.0432    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7781    1.6739    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0092   -1.0248    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5830   -0.5254    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4630   -0.9941    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0584    0.8980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7875   -0.1416    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0168    0.6509    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3340    1.1139    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  5  3  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  1  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  5 11  1  0  0  0  0
 11 12  1  1  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 10 16  1  6  0  0  0
  9 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
  8 20  1  0  0  0  0
 20 21  2  0  0  0  0
 17 22  1  0  0  0  0
 17 23  1  0  0  0  0
  9 24  1  6  0  0  0
  8 25  1  1  0  0  0
  2 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
  1 28  1  0  0  0  0
M  END

     RDKit          3D

 56 59  0  0  0  0  0  0  0  0999 V2000
    3.5875    0.3557   -1.1291 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6784   -0.5099   -0.6878 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1750   -1.7793   -0.2031 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4397   -2.2422    0.1206 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2558   -3.5512    0.5057 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9807   -3.8479    0.4192 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3114   -2.8138    0.0007 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8456   -2.6929   -0.2414 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3736   -1.3063   -0.1086 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2508   -0.2289   -0.6926 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8577    1.0268    0.0257 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7628    2.0514    0.0597 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3233    2.6520    1.1699 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2822    3.7445    0.9722 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9688    2.2159    2.2939 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5056    1.4132   -0.5433 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8858    2.5767    0.1245 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4461    0.2950   -0.0997 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2263    0.2077    1.3025 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8753    0.6545   -0.2729 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4414    1.2892    1.0124 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1114    1.7194   -1.3417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7978   -0.4915   -0.5812 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3805   -1.6575    0.2834 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0080   -2.0630   -0.1852 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7980   -3.2607   -0.1585 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0307   -1.0531   -0.6330 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9630   -1.1242   -2.1344 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6184    0.1131   -1.1182 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2442    1.2973   -1.5013 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3792   -1.7053    0.0845 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0039   -4.2677    0.8358 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3632   -3.2967    0.5839 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5835   -3.1194   -1.2150 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2891   -1.0636    0.9975 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9770   -0.0344   -1.7747 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6370    0.7419    1.0978 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8198    4.6097    0.4449 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6920    4.1281    1.9352 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1712    3.4227    0.3592 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4701    1.5513   -1.6278 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3089    2.8102    0.8752 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2845    1.1620    1.6271 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5586    1.3288    0.8554 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2407    0.6714    1.8969 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0336    2.3076    1.1554 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1772    1.6404   -1.6628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0421    2.7446   -0.8714 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4710    1.6218   -2.2132 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8376   -0.7416   -1.6526 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8216   -0.1998   -0.2768 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0922   -2.4848    0.2875 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2679   -1.2818    1.3178 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9188   -0.1449   -2.6400 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8222   -1.7169   -2.5580 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0552   -1.6736   -2.4940 H   0  0  0  0  0  0  0  0  0  0  0  0
 14 13  1  0
 13 15  2  0
 13 12  1  0
 12 11  1  0
 11 16  1  0
 16 17  1  0
 16 18  1  0
 18 19  1  1
 18 20  1  0
 20 21  1  1
 20 22  1  0
 20 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  2  0
 25 27  1  0
 27 28  1  6
 27  9  1  0
  9  8  1  0
  8  7  1  0
  7  3  2  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  3  2  1  0
  2  1  2  3
  2 10  1  0
 10 11  1  0
 27 18  1  0
 10  9  1  0
  6  7  1  0
 14 38  1  0
 14 39  1  0
 14 40  1  0
 11 37  1  1
 16 41  1  6
 17 42  1  0
 19 43  1  0
 21 44  1  0
 21 45  1  0
 21 46  1  0
 22 47  1  0
 22 48  1  0
 22 49  1  0
 23 50  1  0
 23 51  1  0
 24 52  1  0
 24 53  1  0
 28 54  1  0
 28 55  1  0
 28 56  1  0
  9 35  1  1
  8 33  1  0
  8 34  1  0
  4 31  1  0
  5 32  1  0
  1 29  1  0
  1 30  1  0
 10 36  1  6
M  END


  Mrv1652304282223242D          

 28 31  0  0  1  0            999 V2000
    3.6826    0.6076    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9629   -0.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4311   -0.7991    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7114   -1.5750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6190   -0.6539    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3387    0.1221    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8705    0.7528    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5266    0.2673    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9948   -0.3634    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2751   -1.1393    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0872   -1.2846    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3675   -2.0605    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8357   -2.6912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1160   -3.4671    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0235   -2.5460    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7433   -1.7701    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1827   -0.2182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0976    0.5577    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4342    1.1884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2463    1.0432    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7781    1.6739    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0092   -1.0248    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5830   -0.5254    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4630   -0.9941    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0584    0.8980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7875   -0.1416    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0168    0.6509    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3340    1.1139    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  5  3  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  1  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  5 11  1  0  0  0  0
 11 12  1  1  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 10 16  1  6  0  0  0
  9 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
  8 20  1  0  0  0  0
 20 21  2  0  0  0  0
 17 22  1  0  0  0  0
 17 23  1  0  0  0  0
  9 24  1  6  0  0  0
  8 25  1  1  0  0  0
  2 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
  1 28  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0076261

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)O[C@H]1[C@H](O)[C@@]2(O)C(C)(C)CCC(=O)[C@]2(C)[C@H]2CC3=C(C=CO3)C(=C)[C@H]12

> <INCHI_IDENTIFIER>
InChI=1S/C22H28O6/c1-11-13-7-9-27-15(13)10-14-17(11)18(28-12(2)23)19(25)22(26)20(3,4)8-6-16(24)21(14,22)5/h7,9,14,17-19,25-26H,1,6,8,10H2,2-5H3/t14-,17-,18+,19-,21-,22+/m0/s1

> <INCHI_KEY>
XKTJWVAVUXZAPA-ISSLHIBUSA-N

> <FORMULA>
C22H28O6

> <MOLECULAR_WEIGHT>
388.46

> <EXACT_MASS>
388.188588622

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
41.24970870651773

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2R,7R,8S,9R,10R)-7,8-dihydroxy-2,6,6-trimethyl-11-methylidene-3-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadeca-12(16),13-dien-9-yl acetate

> <ALOGPS_LOGP>
1.95

> <JCHEM_LOGP>
1.9925546609999987

> <ALOGPS_LOGS>
-3.54

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.032381335466276

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.65651497921613

> <JCHEM_PKA_STRONGEST_BASIC>
-2.8610431186755574

> <JCHEM_POLAR_SURFACE_AREA>
96.97

> <JCHEM_REFRACTIVITY>
100.7688

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.13e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2R,7R,8S,9R,10R)-7,8-dihydroxy-2,6,6-trimethyl-11-methylidene-3-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadeca-12(16),13-dien-9-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       6.874   1.134   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.398  -0.314   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.405  -1.492   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.928  -2.940   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.889  -1.221   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.366   0.228   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.358   1.405   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.850   0.499   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.857  -0.678   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.380  -2.127   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.896  -2.398   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       4.419  -3.846   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       3.427  -5.024   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       3.950  -6.472   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       1.911  -4.752   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       1.387  -3.304   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       0.341  -0.407   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.182   1.041   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.810   2.218   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       2.326   1.947   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       3.319   3.125   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       0.017  -1.913   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.088  -0.981   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       0.864  -1.856   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       3.842   1.676   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       8.937  -0.264   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       9.365   1.215   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       8.090   2.079   0.000  0.00  0.00           O+0
CONECT    1    2    7   28                                                  
CONECT    2    1    3   26                                                  
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   11                                                  
CONECT    6    5    7    8                                                  
CONECT    7    6    1                                                       
CONECT    8    6    9   20   25                                             
CONECT    9    8   10   17   24                                             
CONECT   10    9   11   16                                                  
CONECT   11   10    5   12                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16   10                                                            
CONECT   17    9   18   22   23                                             
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19    8   21                                                  
CONECT   21   20                                                            
CONECT   22   17                                                            
CONECT   23   17                                                            
CONECT   24    9                                                            
CONECT   25    8                                                            
CONECT   26    2   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27    1                                                       
MASTER        0    0    0    0    0    0    0    0   28    0   62    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₂H₂₈O₆

Average Mass

388.4600 Da

Monoisotopic Mass

388.18859 Da

IUPAC Name

(1S,2R,7R,8S,9R,10R)-7,8-dihydroxy-2,6,6-trimethyl-11-methylidene-3-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadeca-12(16),13-dien-9-yl acetate

Traditional Name

(1S,2R,7R,8S,9R,10R)-7,8-dihydroxy-2,6,6-trimethyl-11-methylidene-3-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadeca-12(16),13-dien-9-yl acetate

CAS Registry Number

Not Available

SMILES

CC(=O)O[C@H]1[C@H](O)[C@@]2(O)C(C)(C)CCC(=O)[C@]2(C)[C@H]2CC3=C(C=CO3)C(=C)[C@H]12

InChI Identifier

InChI=1S/C22H28O6/c1-11-13-7-9-27-15(13)10-14-17(11)18(28-12(2)23)19(25)22(26)20(3,4)8-6-16(24)21(14,22)5/h7,9,14,17-19,25-26H,1,6,8,10H2,2-5H3/t14-,17-,18+,19-,21-,22+/m0/s1

InChI Key

XKTJWVAVUXZAPA-ISSLHIBUSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Guilandina bonduc	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Diterpenoids

Alternative Parents

Substituents

Diterpenoid
Naphthofuran
Benzofuran
Heteroaromatic compound
Cyclic alcohol
Tertiary alcohol
Furan
1,2-diol
Carboxylic acid ester
Secondary alcohol
Ketone
Carboxylic acid derivative
Oxacycle
Organoheterocyclic compound
Monocarboxylic acid or derivatives
Hydrocarbon derivative
Organic oxygen compound
Carbonyl group
Alcohol
Organooxygen compound
Organic oxide
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.95	ALOGPS
logP	1.99	ChemAxon
logS	-3.5	ALOGPS
pKa (Strongest Acidic)	12.66	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	96.97 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	100.77 m³·mol⁻¹	ChemAxon
Polarizability	41.25 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00038619

Chemspider ID

23310958

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

23642923

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for (+)-Bonducellpin F (NP0076261)

MOL for NP0076261 ((+)-Bonducellpin F)

3D MOL for NP0076261 ((+)-Bonducellpin F)

3D SDF for NP0076261 ((+)-Bonducellpin F)

3D-SDF for NP0076261 ((+)-Bonducellpin F)

PDB for NP0076261 ((+)-Bonducellpin F)

3D PDB for NP0076261 ((+)-Bonducellpin F)

SMILES for NP0076261 ((+)-Bonducellpin F)

INCHI for NP0076261 ((+)-Bonducellpin F)

Structure for NP0076261 ((+)-Bonducellpin F)

3D Structure for NP0076261 ((+)-Bonducellpin F)