NP-MRD: Showing NP-Card for (+)-Berkeleyamide B (NP0076235)

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Record Information

Version

2.0

Created at

2022-04-28 21:23:16 UTC

Updated at

2022-04-28 21:23:16 UTC

NP-MRD ID

NP0076235

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(+)-Berkeleyamide B

Description

(2S)-N-{6-[(R)-(acetyloxy)(phenyl)methyl]-4-oxo-4H-pyran-3-carbonyl}-2-methylbutanimidic acid belongs to the class of organic compounds known as benzyloxycarbonyls. These are organic compounds containing a carbonyl group substituted with a benzyloxyl group. (+)-Berkeleyamide B is found in Talaromyces ruber. Based on a literature review very few articles have been published on (2S)-N-{6-[(R)-(acetyloxy)(phenyl)methyl]-4-oxo-4H-pyran-3-carbonyl}-2-methylbutanimidic acid.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282223232D          

 27 28  0  0  1  0            999 V2000
    2.8579   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -2.4750    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  1  7  2  0  0  0  0
  5  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
  9 14  1  0  0  0  0
  8 15  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
  1 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
M  END

     RDKit          3D

 48 49  0  0  0  0  0  0  0  0999 V2000
    7.4545   -0.6854   -0.5685 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6561    0.0201    0.4851 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1765   -0.0694    0.0558 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.0350    0.6122   -1.3013 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3194    0.6174    1.0317 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8816    1.3350    1.9131 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9275    0.4966    1.0020 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1749   -0.2840    0.1152 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7530   -0.9608   -0.7583 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7098   -0.3436    0.1676 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0225   -0.3209    1.3557 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2872   -0.3734    1.4166 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0611   -0.4522    0.3511 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5433   -0.5098    0.4597 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.1079   -1.4929   -0.3802 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8528   -2.5543    0.0622 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4429   -3.5858   -0.8423 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0415   -2.6494    1.3183 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1455    0.8426    0.2131 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4885    1.0303    0.0768 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9554    2.3042   -0.1472 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1355    3.4093   -0.2423 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7729    3.1919   -0.1001 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2843    1.9214    0.1252 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4099   -0.4777   -0.8674 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0361   -0.4253   -0.9928 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5420   -0.4498   -2.1169 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8601    0.0057   -1.3381 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8271   -1.4913   -1.0006 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3257   -1.1973   -0.0740 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7141   -0.6090    1.4120 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9473    1.0567    0.6655 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9399   -1.1457    0.0244 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1646    1.2792   -1.3698 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9219    1.2817   -1.4878 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0048   -0.1736   -2.0645 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3460    1.0370    1.7251 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5994   -0.2570    2.2686 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8215   -0.7731    1.5012 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6990   -4.2437   -1.2905 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9740   -3.0571   -1.6858 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2403   -4.1399   -0.3081 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1299    0.1641    0.1515 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0185    2.4458   -0.2540 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5450    4.3964   -0.4198 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0811    4.0209   -0.1653 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1983    1.7967    0.2314 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0312   -0.5429   -1.7674 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  3  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  1  0
 13 25  2  0
 25 26  1  0
 26 27  2  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  2  0
 14 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 22 23  1  0
 23 24  2  0
 26 10  1  0
 24 19  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  2 31  1  0
  2 32  1  0
  3 33  1  6
  4 34  1  0
  4 35  1  0
  4 36  1  0
  7 37  1  0
 11 38  1  0
 25 48  1  0
 14 39  1  1
 17 40  1  0
 17 41  1  0
 17 42  1  0
 20 43  1  0
 21 44  1  0
 22 45  1  0
 23 46  1  0
 24 47  1  0
M  END


  Mrv1652304282223232D          

 27 28  0  0  1  0            999 V2000
    2.8579   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -2.4750    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  1  7  2  0  0  0  0
  5  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
  9 14  1  0  0  0  0
  8 15  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
  1 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0076235

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC[C@H](C)C(=O)NC(=O)C1=COC(=CC1=O)[C@H](OC(C)=O)C1=CC=CC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C20H21NO6/c1-4-12(2)19(24)21-20(25)15-11-26-17(10-16(15)23)18(27-13(3)22)14-8-6-5-7-9-14/h5-12,18H,4H2,1-3H3,(H,21,24,25)/t12-,18+/m0/s1

> <INCHI_KEY>
TYALAHHUSALVLR-KPZWWZAWSA-N

> <FORMULA>
C20H21NO6

> <MOLECULAR_WEIGHT>
371.389

> <EXACT_MASS>
371.1368874

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
48

> <JCHEM_AVERAGE_POLARIZABILITY>
38.44820448678017

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(R)-(5-{[(2S)-2-methylbutanoyl]carbamoyl}-4-oxo-4H-pyran-2-yl)(phenyl)methyl acetate

> <ALOGPS_LOGP>
2.68

> <JCHEM_LOGP>
2.4287074690000003

> <ALOGPS_LOGS>
-4.87

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.533261692195188

> <JCHEM_PKA_STRONGEST_BASIC>
-5.016192213673722

> <JCHEM_POLAR_SURFACE_AREA>
98.77000000000001

> <JCHEM_REFRACTIVITY>
97.9974

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.99e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(R)-(5-{[(2S)-2-methylbutanoyl]carbamoyl}-4-oxopyran-2-yl)(phenyl)methyl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       5.335  -4.620   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.001  -5.390   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       4.001  -6.930   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0       2.667  -4.620   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       4.001  -2.310   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       0.000  -3.080   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       0.000  -4.620   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       1.334  -5.390   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      -1.334  -5.390   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       6.668  -5.390   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       6.668  -6.930   0.000  0.00  0.00           O+0
HETATM   21  N   UNK     0       8.002  -4.620   0.000  0.00  0.00           N+0
HETATM   22  C   UNK     0       9.336  -5.390   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       9.336  -6.930   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      10.669  -4.620   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      10.669  -3.080   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      12.003  -5.390   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      13.337  -4.620   0.000  0.00  0.00           C+0
CONECT    1    2    7   19                                                  
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6    8                                                  
CONECT    6    5    7                                                       
CONECT    7    6    1                                                       
CONECT    8    5    9   15                                                  
CONECT    9    8   10   14                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13    9                                                       
CONECT   15    8   16                                                       
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16                                                            
CONECT   19    1   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   56    0
END

View in JSmol

Synonyms

Value	Source
(2S)-N-{6-[(R)-(acetyloxy)(phenyl)methyl]-4-oxo-4H-pyran-3-carbonyl}-2-methylbutanimidate	Generator

Chemical Formula

C₂₀H₂₁NO₆

Average Mass

371.3890 Da

Monoisotopic Mass

371.13689 Da

IUPAC Name

(R)-(5-{[(2S)-2-methylbutanoyl]carbamoyl}-4-oxo-4H-pyran-2-yl)(phenyl)methyl acetate

Traditional Name

(R)-(5-{[(2S)-2-methylbutanoyl]carbamoyl}-4-oxopyran-2-yl)(phenyl)methyl acetate

CAS Registry Number

Not Available

SMILES

CC[C@H](C)C(=O)NC(=O)C1=COC(=CC1=O)[C@H](OC(C)=O)C1=CC=CC=C1

InChI Identifier

InChI=1S/C20H21NO6/c1-4-12(2)19(24)21-20(25)15-11-26-17(10-16(15)23)18(27-13(3)22)14-8-6-5-7-9-14/h5-12,18H,4H2,1-3H3,(H,21,24,25)/t12-,18+/m0/s1

InChI Key

TYALAHHUSALVLR-KPZWWZAWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Talaromyces ruber	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as benzyloxycarbonyls. These are organic compounds containing a carbonyl group substituted with a benzyloxyl group.

Kingdom

Organic compounds

Super Class

Benzenoids

Class

Benzene and substituted derivatives

Sub Class

Benzyloxycarbonyls

Direct Parent

Benzyloxycarbonyls

Alternative Parents

Substituents

Benzyloxycarbonyl
Pyranone
Pyran
Heteroaromatic compound
Cyclic ketone
Carboxylic acid ester
Oxacycle
Organoheterocyclic compound
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Carbonyl group
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.68	ALOGPS
logP	2.43	ChemAxon
logS	-4.9	ALOGPS
pKa (Strongest Acidic)	11.53	ChemAxon
pKa (Strongest Basic)	-5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	98.77 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	98 m³·mol⁻¹	ChemAxon
Polarizability	38.45 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163106110

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for (+)-Berkeleyamide B (NP0076235)

MOL for NP0076235 ((+)-Berkeleyamide B)

3D MOL for NP0076235 ((+)-Berkeleyamide B)

3D SDF for NP0076235 ((+)-Berkeleyamide B)

3D-SDF for NP0076235 ((+)-Berkeleyamide B)

PDB for NP0076235 ((+)-Berkeleyamide B)

3D PDB for NP0076235 ((+)-Berkeleyamide B)

SMILES for NP0076235 ((+)-Berkeleyamide B)

INCHI for NP0076235 ((+)-Berkeleyamide B)

Structure for NP0076235 ((+)-Berkeleyamide B)

3D Structure for NP0076235 ((+)-Berkeleyamide B)