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Record Information
Version2.0
Created at2022-04-28 20:19:29 UTC
Updated at2022-04-28 20:19:29 UTC
NP-MRD IDNP0075004
Secondary Accession NumbersNone
Natural Product Identification
Common Name4-Hydroxyisocordoin
DescriptionIsobavachalcone belongs to the class of organic compounds known as 3-prenylated chalcones. These are chalcones featuring a C5-isoprenoid unit at the 3-position. Thus, isobavachalcone is considered to be a flavonoid. Isobavachalcone is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. 4-Hydroxyisocordoin is found in Angelica keiskei, Anthyllis hermanniae, Artocarpus altilis, Brosimum acutifolium , Broussonetia papyrifera, Cullen corylifolium, Erythrina burttii, Erythrina fusca, Glycyrrhiza uralensis, Hypericum geminiflorum, Lespedeza cyrtobotrya, Maclura tinctoria, Morus alba, Morus cathayana and Sophora prostrata. 4-Hydroxyisocordoin was first documented in 2021 (PMID: 35011662). Based on a literature review a small amount of articles have been published on isobavachalcone (PMID: 35323743) (PMID: 35206019) (PMID: 35101544) (PMID: 34964142).
Structure
Thumb
Synonyms
ValueSource
2',4,4'-Trihydroxy-3'-(3-methyl-2-butenyl)chalconeChEBI
Chemical FormulaC20H20O4
Average Mass324.3760 Da
Monoisotopic Mass324.13616 Da
IUPAC Name(2E)-1-[2,4-dihydroxy-3-(3-methylbut-2-en-1-yl)phenyl]-3-(4-hydroxyphenyl)prop-2-en-1-one
Traditional Nameisobavachalcone
CAS Registry NumberNot Available
SMILES
CC(C)=CCC1=C(O)C=CC(C(=O)\C=C\C2=CC=C(O)C=C2)=C1O
InChI Identifier
InChI=1S/C20H20O4/c1-13(2)3-9-16-19(23)12-10-17(20(16)24)18(22)11-6-14-4-7-15(21)8-5-14/h3-8,10-12,21,23-24H,9H2,1-2H3/b11-6+
InChI KeyDUWPGRAKHMEPCM-IZZDOVSWSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Angelica keiskeiLOTUS Database
Anthyllis hermanniaeLOTUS Database
Artocarpus altilisLOTUS Database
Brosimum acutifoliumPlant
Broussonetia papyriferaLOTUS Database
Cullen corylifoliumLOTUS Database
Erythrina burttiiLOTUS Database
Erythrina fuscaLOTUS Database
Glycyrrhiza uralensisLOTUS Database
Hypericum geminiflorumLOTUS Database
Lespedeza cyrtobotryaLOTUS Database
Maclura tinctoriaLOTUS Database
Morus albaLOTUS Database
Morus cathayanaLOTUS Database
Sophora prostrataLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 3-prenylated chalcones. These are chalcones featuring a C5-isoprenoid unit at the 3-position.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassLinear 1,3-diarylpropanoids
Sub ClassChalcones and dihydrochalcones
Direct Parent3-prenylated chalcones
Alternative Parents
Substituents
  • 3-prenylated chalcone
  • 2'-hydroxychalcone
  • Cinnamylphenol
  • Hydroxycinnamic acid or derivatives
  • Benzoyl
  • Aryl ketone
  • Resorcinol
  • Styrene
  • Phenol
  • 1-hydroxy-2-unsubstituted benzenoid
  • 1-hydroxy-4-unsubstituted benzenoid
  • Monocyclic benzene moiety
  • Benzenoid
  • Vinylogous acid
  • Enone
  • Acryloyl-group
  • Alpha,beta-unsaturated ketone
  • Ketone
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organic oxide
  • Organic oxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.91ALOGPS
logP5.36ChemAxon
logS-4.6ALOGPS
pKa (Strongest Acidic)6.93ChemAxon
pKa (Strongest Basic)-6.4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area77.76 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity97.06 m³·mol⁻¹ChemAxon
Polarizability35.78 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00002381
Chemspider ID4444667
KEGG Compound IDC08648
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5281255
PDB IDNot Available
ChEBI ID28106
Good Scents IDNot Available
References
General References
  1. Assis LR, Theodoro RDS, Costa MBS, Nascentes JAS, Rocha MDD, Bessa MAS, Menezes RP, Dilarri G, Hypolito GB, Santos VRD, Duque C, Ferreira H, Martins CHG, Regasini LO: Antibacterial Activity of Isobavachalcone (IBC) Is Associated with Membrane Disruption. Membranes (Basel). 2022 Feb 25;12(3). pii: membranes12030269. doi: 10.3390/membranes12030269. [PubMed:35323743 ]
  2. Xiao Y, Lee IS: Effects of Microbial Transformation on the Biological Activities of Prenylated Chalcones from Angelica keiskei. Foods. 2022 Feb 14;11(4). pii: foods11040543. doi: 10.3390/foods11040543. [PubMed:35206019 ]
  3. Li Y, Yan D, Jin J, Tan B, Chen X, Zou B, Song G, Weng F, Liu C, Qiu F: Clarify the potential cholestatic hepatotoxicity components from Chinese Herb Medicine and metabolism's role via hBSEP vesicles and S9/hBSEP vesicles. Toxicol In Vitro. 2022 Apr;80:105324. doi: 10.1016/j.tiv.2022.105324. Epub 2022 Jan 29. [PubMed:35101544 ]
  4. Maglioni S, Arsalan N, Hamacher A, Afshar S, Schiavi A, Beller M, Ventura N: High-Content C. elegans Screen Identifies Natural Compounds Impacting Mitochondria-Lipid Homeostasis and Promoting Healthspan. Cells. 2021 Dec 29;11(1). pii: cells11010100. doi: 10.3390/cells11010100. [PubMed:35011662 ]
  5. Shin S, Park J, Lee YE, Ko H, Youn HS: Isobavachalcone suppresses the TRIF-dependent signaling pathway of Toll-like receptors. Arch Pharm (Weinheim). 2022 Mar;355(3):e2100404. doi: 10.1002/ardp.202100404. Epub 2021 Dec 29. [PubMed:34964142 ]