NP-MRD: Showing NP-Card for Neoglabrescin B (NP0074749)

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Record Information

Version

2.0

Created at

2022-04-28 20:04:04 UTC

Updated at

2022-04-28 20:04:04 UTC

NP-MRD ID

NP0074749

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Neoglabrescin B

Description

(1S,2S,5S,6R,7S,8S,9R,12R,15R,16R)-1,5,6,7,8-pentahydroxy-8-(hydroxymethyl)-4,11,11,15-tetramethyl-10-oxatetracyclo[7.6.1.0²,⁶.0¹²,¹⁶]Hexadec-3-en-13-one belongs to the class of organic compounds known as tetrahydrofurans. These are heterocyclic compounds containing a saturated, aliphatic, five-membered ring where a carbon is replaced by an oxygen. Neoglabrescin B is found in Neoboutonia glabrescens Prain and Neoboutonia mannii. Based on a literature review very few articles have been published on (1S,2S,5S,6R,7S,8S,9R,12R,15R,16R)-1,5,6,7,8-pentahydroxy-8-(hydroxymethyl)-4,11,11,15-tetramethyl-10-oxatetracyclo[7.6.1.0²,⁶.0¹²,¹⁶]Hexadec-3-en-13-one.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282222042D          

 28 31  0  0  1  0            999 V2000
    1.9564   -0.2213    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6997    0.1367    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8832    0.9410    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3689    1.5860    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5439    1.5860    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0295    0.9410    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2131    0.1367    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5048   -0.2865    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5172   -1.1114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1910   -1.5345    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2378   -1.5131    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9460   -1.0900    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6611   -1.5014    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1164    0.2563    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2078    1.0149    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7270   -0.2984    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9073    0.4912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5624    2.4108    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2859    2.8072    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8875    2.0858    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7268    2.3293    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7049    1.0149    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0292    0.2563    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4079   -0.2865    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8335    0.0728    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1281    1.7232    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2075    1.6996    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6523   -0.6644    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  6  0  0  0
  1  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
  1 12  1  0  0  0  0
 12 13  1  6  0  0  0
  8 14  1  0  0  0  0
 14 15  1  0  0  0  0
  6 15  1  1  0  0  0
 14 16  1  0  0  0  0
 14 17  1  0  0  0  0
  5 18  1  6  0  0  0
 18 19  1  0  0  0  0
  5 20  1  1  0  0  0
  4 21  1  1  0  0  0
  3 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
  2 24  1  1  0  0  0
 23 25  1  0  0  0  0
 22 26  1  1  0  0  0
  3 27  1  1  0  0  0
  1 28  1  1  0  0  0
M  END

     RDKit          3D

 58 61  0  0  0  0  0  0  0  0999 V2000
   -4.5589   -1.2584    1.3690 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2741   -0.6573    0.8773 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1360   -1.3339    0.7970 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0804   -0.4648    0.2815 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1242   -1.0096   -0.6795 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6374   -0.8059   -1.9920 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1647   -2.4861   -0.6667 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9743   -3.3789   -0.9943 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0008   -2.9273    0.5182 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2698   -2.1592    0.4146 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3059   -2.7437    0.2765 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1115   -0.7580    0.4936 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1520   -0.2939   -0.6228 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1577    1.1097   -0.1205 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5348    1.3734   -0.2654 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1915    0.2064    0.2062 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1580   -0.2530   -0.8610 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9900    0.5564    1.4412 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2391    2.0479   -0.7384 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.0805    1.8189   -2.0699 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8085    3.4674   -0.6017 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0995    4.4244   -1.0084 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0386    2.0579    0.1183 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8522    3.1169   -0.2046 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7765    0.7751   -0.2058 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9856    0.8075   -1.5838 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1432    0.7503    0.4317 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.1556    0.9701   -0.5018 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3576   -0.5191    1.3794 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3523   -1.6263    2.3989 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8689   -2.1240    0.7518 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0284   -2.3754    1.0820 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4957   -0.1361    1.1952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1002   -1.3302   -2.6312 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8996   -2.6018   -1.5323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9184   -2.8487   -1.2510 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7915   -4.0157   -1.9155 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1269   -4.1690   -0.2019 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1804   -3.9990    0.4086 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4782   -2.6956    1.4900 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6339   -0.4656    1.4633 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6627   -0.3277   -1.5879 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0258    1.1759    1.0033 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7430    0.6224   -1.2115 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8496   -0.9993   -0.4320 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6757   -0.7008   -1.7293 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0907    0.4034    1.2736 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8740    1.6207    1.6969 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7142   -0.1333    2.2636 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4373    2.6850   -2.4310 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7990    3.5605   -1.0442 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9489    3.6007    0.5100 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2194    5.1337   -0.3178 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7394    2.0106    1.1726 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1032    3.5892    0.6290 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8059    0.3663   -1.8646 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2151    1.4575    1.2880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1826    1.8895   -0.8429 H   0  0  0  0  0  0  0  0  0  0  0  0
  8  7  1  0
  7  9  1  0
  9 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  6
 16 18  1  0
 14 19  1  0
 19 20  1  6
 19 21  1  0
 21 22  1  0
 19 23  1  0
 23 24  1  0
 23 25  1  0
 25 26  1  6
 25 27  1  0
 27 28  1  0
 27  2  1  0
  2  1  1  0
  2  3  2  0
  3  4  1  0
  4  5  1  0
  5  6  1  6
  5  7  1  0
 16 12  1  0
  4 25  1  0
  5 13  1  0
  8 36  1  0
  8 37  1  0
  8 38  1  0
  7 35  1  6
  9 39  1  0
  9 40  1  0
 12 41  1  1
 13 42  1  6
 14 43  1  1
 17 44  1  0
 17 45  1  0
 17 46  1  0
 18 47  1  0
 18 48  1  0
 18 49  1  0
 20 50  1  0
 21 51  1  0
 21 52  1  0
 22 53  1  0
 23 54  1  1
 24 55  1  0
 26 56  1  0
 27 57  1  1
 28 58  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  3 32  1  0
  4 33  1  1
  6 34  1  0
M  END


  Mrv1652304282222042D          

 28 31  0  0  1  0            999 V2000
    1.9564   -0.2213    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6997    0.1367    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8832    0.9410    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3689    1.5860    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5439    1.5860    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0295    0.9410    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2131    0.1367    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5048   -0.2865    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5172   -1.1114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1910   -1.5345    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2378   -1.5131    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9460   -1.0900    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6611   -1.5014    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1164    0.2563    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2078    1.0149    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7270   -0.2984    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9073    0.4912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5624    2.4108    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2859    2.8072    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8875    2.0858    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7268    2.3293    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7049    1.0149    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0292    0.2563    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4079   -0.2865    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8335    0.0728    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1281    1.7232    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2075    1.6996    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6523   -0.6644    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  6  0  0  0
  1  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
  1 12  1  0  0  0  0
 12 13  1  6  0  0  0
  8 14  1  0  0  0  0
 14 15  1  0  0  0  0
  6 15  1  1  0  0  0
 14 16  1  0  0  0  0
 14 17  1  0  0  0  0
  5 18  1  6  0  0  0
 18 19  1  0  0  0  0
  5 20  1  1  0  0  0
  4 21  1  1  0  0  0
  3 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
  2 24  1  1  0  0  0
 23 25  1  0  0  0  0
 22 26  1  1  0  0  0
  3 27  1  1  0  0  0
  1 28  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0074749

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@H]1CC(=O)[C@@H]2[C@@H]3[C@@H](OC2(C)C)[C@](O)(CO)[C@@H](O)[C@]2(O)[C@@H](O)C(C)=C[C@H]2[C@]13O

> <INCHI_IDENTIFIER>
InChI=1S/C20H30O8/c1-8-5-11-19(26)9(2)6-10(22)12-13(19)15(28-17(12,3)4)18(25,7-21)16(24)20(11,27)14(8)23/h5,9,11-16,21,23-27H,6-7H2,1-4H3/t9-,11+,12-,13-,14+,15-,16-,18-,19-,20-/m1/s1

> <INCHI_KEY>
ZCRNYQYHLSLSTH-XXLLPAFDSA-N

> <FORMULA>
C20H30O8

> <MOLECULAR_WEIGHT>
398.452

> <EXACT_MASS>
398.194067926

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
58

> <JCHEM_AVERAGE_POLARIZABILITY>
41.17179005723098

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
6

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1S,2S,5S,6R,7S,8S,9R,12R,15R,16R)-1,5,6,7,8-pentahydroxy-8-(hydroxymethyl)-4,11,11,15-tetramethyl-10-oxatetracyclo[7.6.1.0^{2,6}.0^{12,16}]hexadec-3-en-13-one

> <ALOGPS_LOGP>
-0.01

> <JCHEM_LOGP>
-2.446857469333334

> <ALOGPS_LOGS>
-1.31

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.56882180886095

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.811067957138967

> <JCHEM_PKA_STRONGEST_BASIC>
-3.1448641006007625

> <JCHEM_POLAR_SURFACE_AREA>
147.68

> <JCHEM_REFRACTIVITY>
97.4942

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.94e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2S,5S,6R,7S,8S,9R,12R,15R,16R)-1,5,6,7,8-pentahydroxy-8-(hydroxymethyl)-4,11,11,15-tetramethyl-10-oxatetracyclo[7.6.1.0^{2,6}.0^{12,16}]hexadec-3-en-13-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       3.652  -0.413   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.039   0.255   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.382   1.757   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.422   2.961   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.882   2.961   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.922   1.757   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.264   0.255   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.942  -0.535   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.965  -2.075   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      -0.357  -2.864   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       2.310  -2.825   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.632  -2.035   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.967  -2.803   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -0.217   0.478   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       0.388   1.895   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      -1.357  -0.557   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -1.694   0.917   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.916   4.500   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       4.267   5.240   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0       1.657   3.893   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0       5.090   4.348   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       6.916   1.895   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       7.521   0.478   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.361  -0.535   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       9.023   0.136   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       7.706   3.217   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       5.987   3.173   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0       4.951  -1.240   0.000  0.00  0.00           O+0
CONECT    1    2    7   12   28                                             
CONECT    2    1    3   24                                                  
CONECT    3    2    4   22   27                                             
CONECT    4    3    5   21                                                  
CONECT    5    4    6   18   20                                             
CONECT    6    5    7   15                                                  
CONECT    7    6    1    8                                                  
CONECT    8    7    9   14                                                  
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12                                                       
CONECT   12   11    1   13                                                  
CONECT   13   12                                                            
CONECT   14    8   15   16   17                                             
CONECT   15   14    6                                                       
CONECT   16   14                                                            
CONECT   17   14                                                            
CONECT   18    5   19                                                       
CONECT   19   18                                                            
CONECT   20    5                                                            
CONECT   21    4                                                            
CONECT   22    3   23   26                                                  
CONECT   23   22   24   25                                                  
CONECT   24   23    2                                                       
CONECT   25   23                                                            
CONECT   26   22                                                            
CONECT   27    3                                                            
CONECT   28    1                                                            
MASTER        0    0    0    0    0    0    0    0   28    0   62    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₃₀O₈

Average Mass

398.4520 Da

Monoisotopic Mass

398.19407 Da

IUPAC Name

(1S,2S,5S,6R,7S,8S,9R,12R,15R,16R)-1,5,6,7,8-pentahydroxy-8-(hydroxymethyl)-4,11,11,15-tetramethyl-10-oxatetracyclo[7.6.1.0^{2,6}.0^{12,16}]hexadec-3-en-13-one

Traditional Name

(1S,2S,5S,6R,7S,8S,9R,12R,15R,16R)-1,5,6,7,8-pentahydroxy-8-(hydroxymethyl)-4,11,11,15-tetramethyl-10-oxatetracyclo[7.6.1.0^{2,6}.0^{12,16}]hexadec-3-en-13-one

CAS Registry Number

Not Available

SMILES

C[C@@H]1CC(=O)[C@@H]2[C@@H]3[C@@H](OC2(C)C)[C@](O)(CO)[C@@H](O)[C@]2(O)[C@@H](O)C(C)=C[C@H]2[C@]13O

InChI Identifier

InChI=1S/C20H30O8/c1-8-5-11-19(26)9(2)6-10(22)12-13(19)15(28-17(12,3)4)18(25,7-21)16(24)20(11,27)14(8)23/h5,9,11-16,21,23-27H,6-7H2,1-4H3/t9-,11+,12-,13-,14+,15-,16-,18-,19-,20-/m1/s1

InChI Key

ZCRNYQYHLSLSTH-XXLLPAFDSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Neoboutonia glabrescens Prain	Plant	KNApSAcK
Neoboutonia mannii	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as tetrahydrofurans. These are heterocyclic compounds containing a saturated, aliphatic, five-membered ring where a carbon is replaced by an oxygen.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Tetrahydrofurans

Sub Class

Not Available

Direct Parent

Tetrahydrofurans

Alternative Parents

Substituents

Tetrahydrofuran
Tertiary alcohol
Cyclic alcohol
Secondary alcohol
Ketone
Oxacycle
Polyol
Ether
Dialkyl ether
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-0.01	ALOGPS
logP	-2.4	ChemAxon
logS	-1.3	ALOGPS
pKa (Strongest Acidic)	11.81	ChemAxon
pKa (Strongest Basic)	-3.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	6	ChemAxon
Polar Surface Area	147.68 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	97.49 m³·mol⁻¹	ChemAxon
Polarizability	41.17 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162958540

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Neoglabrescin B (NP0074749)

MOL for NP0074749 (Neoglabrescin B)

3D MOL for NP0074749 (Neoglabrescin B)

3D SDF for NP0074749 (Neoglabrescin B)

3D-SDF for NP0074749 (Neoglabrescin B)

PDB for NP0074749 (Neoglabrescin B)

3D PDB for NP0074749 (Neoglabrescin B)

SMILES for NP0074749 (Neoglabrescin B)

INCHI for NP0074749 (Neoglabrescin B)

Structure for NP0074749 (Neoglabrescin B)

3D Structure for NP0074749 (Neoglabrescin B)