NP-MRD: Showing NP-Card for (-)-Podocarpaside D (NP0073931)

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Record Information

Version

1.0

Created at

2022-04-28 19:08:31 UTC

Updated at

2022-04-28 19:08:31 UTC

NP-MRD ID

NP0073931

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(-)-Podocarpaside D

Description

Podocarpaside D belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. (-)-Podocarpaside D is found in Actaea podocarpa and Actaea podocarpa DC.. Based on a literature review very few articles have been published on Podocarpaside D.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282221082D          

 44 48  0  0  1  0            999 V2000
    6.0088    1.2850    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6590    0.7771    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.6673   -0.0478    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.0275   -0.5687    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2213   -0.3932    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7635   -1.0794    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9402   -1.0261    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5748   -0.2864    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0327    0.3999    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.8559    0.3465    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2064    1.0934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5215    1.0474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7477    0.7613    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0614    1.2192    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7806   -0.0630    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1331   -0.5742    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2520   -1.3906    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3666   -0.2690    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7191   -0.7803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8380   -1.5966    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0474   -0.4751    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6949   -0.9863    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   10.2436   -0.4244    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   11.6725   -0.4100    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.6559    1.2399    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.2187    2.0505    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.7372   -0.8698    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10  5  1  6  0  0  0
 10 11  1  0  0  0  0
  1 11  1  0  0  0  0
  9 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
  8 15  1  0  0  0  0
 15 16  1  1  0  0  0
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 16 18  1  0  0  0  0
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 19 20  2  0  0  0  0
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 22 24  1  0  0  0  0
 22 25  1  0  0  0  0
  9 26  1  6  0  0  0
  8 27  1  1  0  0  0
  3 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
  2 31  1  0  0  0  0
 31 32  1  0  0  0  0
 31 33  1  0  0  0  0
 30 34  1  1  0  0  0
 35 34  1  1  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
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 35 40  1  0  0  0  0
 38 41  1  1  0  0  0
 37 42  1  1  0  0  0
 36 43  1  6  0  0  0
  3 44  1  1  0  0  0
M  END

     RDKit          3D

100104  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv1652304282221082D          

 44 48  0  0  1  0            999 V2000
    6.0088    1.2850    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6590    0.7771    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.6673   -0.0478    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.0275   -0.5687    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2213   -0.3932    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7635   -1.0794    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9402   -1.0261    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5748   -0.2864    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0327    0.3999    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.8559    0.3465    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2064    1.0934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5215    1.0474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7477    0.7613    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0614    1.2192    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7806   -0.0630    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1331   -0.5742    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2520   -1.3906    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3666   -0.2690    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7191   -0.7803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8380   -1.5966    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0474   -0.4751    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6949   -0.9863    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3425   -1.4975    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1837   -1.6338    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2061   -0.3388    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4163    1.1303    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0477   -0.9211    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3859   -0.4531    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0961   -0.0335    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0879    0.7915    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.3693    1.1968    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7493    1.9291    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9747    1.9213    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7981    1.2112    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.5167    0.8059    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.2270    1.2255    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.9456    0.8202    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.9539   -0.0047    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.2436   -0.4244    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5250   -0.0191    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.6725   -0.4100    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.6559    1.2399    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.2187    2.0505    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.7372   -0.8698    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10  5  1  6  0  0  0
 10 11  1  0  0  0  0
  1 11  1  0  0  0  0
  9 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
  8 15  1  0  0  0  0
 15 16  1  1  0  0  0
 16 17  1  6  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 22 25  1  0  0  0  0
  9 26  1  6  0  0  0
  8 27  1  1  0  0  0
  3 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
  2 31  1  0  0  0  0
 31 32  1  0  0  0  0
 31 33  1  0  0  0  0
 30 34  1  1  0  0  0
 35 34  1  1  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 35 40  1  0  0  0  0
 38 41  1  1  0  0  0
 37 42  1  1  0  0  0
 36 43  1  6  0  0  0
  3 44  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0073931

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H](CC(=O)CC(C)(C)O)[C@H]1C(=O)C[C@@]2(C)[C@@H]3CC[C@H]4C(C)(C)[C@H](CC[C@]4(O)CC3=CC[C@]12C)O[C@@H]1OC[C@H](O)[C@H](O)[C@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C35H56O9/c1-19(14-21(36)16-31(2,3)41)27-23(37)17-34(7)22-8-9-25-32(4,5)26(44-30-29(40)28(39)24(38)18-43-30)11-13-35(25,42)15-20(22)10-12-33(27,34)6/h10,19,22,24-30,38-42H,8-9,11-18H2,1-7H3/t19-,22-,24+,25+,26+,27+,28+,29-,30+,33-,34+,35+/m1/s1

> <INCHI_KEY>
QOBLNULJOJPLNH-MWTKHQHPSA-N

> <FORMULA>
C35H56O9

> <MOLECULAR_WEIGHT>
620.824

> <EXACT_MASS>
620.392433383

> <JCHEM_ACCEPTOR_COUNT>
9

> <JCHEM_ATOM_COUNT>
100

> <JCHEM_AVERAGE_POLARIZABILITY>
69.98345544477942

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3S,6S,8S,11R,12S,15R,16R)-3-hydroxy-15-[(2R)-6-hydroxy-6-methyl-4-oxoheptan-2-yl]-7,7,12,16-tetramethyl-6-{[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy}tetracyclo[9.7.0.0^{3,8}.0^{12,16}]octadec-1(18)-en-14-one

> <ALOGPS_LOGP>
2.94

> <JCHEM_LOGP>
2.5050016796666648

> <ALOGPS_LOGS>
-4.35

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.362826774096249

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.243086217032792

> <JCHEM_PKA_STRONGEST_BASIC>
-2.7048420998099205

> <JCHEM_POLAR_SURFACE_AREA>
153.75

> <JCHEM_REFRACTIVITY>
165.13390000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.78e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3S,6S,8S,11R,12S,15R,16R)-3-hydroxy-15-[(2R)-6-hydroxy-6-methyl-4-oxoheptan-2-yl]-7,7,12,16-tetramethyl-6-{[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy}tetracyclo[9.7.0.0^{3,8}.0^{12,16}]octadec-1(18)-en-14-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0      11.217   2.399   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      12.430   1.451   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      12.446  -0.089   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      11.251  -1.061   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       9.747  -0.734   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       8.892  -2.015   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       7.355  -1.915   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.673  -0.535   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       7.528   0.746   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.064   0.647   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       9.719   2.041   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.573   1.955   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.129   1.421   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       3.848   2.276   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       5.191  -0.118   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.982  -1.072   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.204  -2.596   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.551  -0.502   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.342  -1.456   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       1.564  -2.980   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      -0.088  -0.887   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -1.297  -1.841   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      -2.506  -2.795   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      -0.343  -3.050   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -2.251  -0.632   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       8.244   2.110   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       5.689  -1.719   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      13.787  -0.846   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      15.113  -0.062   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      15.097   1.477   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      13.756   2.234   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      14.465   3.601   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      13.019   3.586   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      16.423   2.261   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      17.765   1.504   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      19.090   2.288   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      20.432   1.531   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      20.447  -0.009   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      19.121  -0.792   0.000  0.00  0.00           C+0
HETATM   40  O   UNK     0      17.780  -0.036   0.000  0.00  0.00           O+0
HETATM   41  O   UNK     0      21.789  -0.765   0.000  0.00  0.00           O+0
HETATM   42  O   UNK     0      21.758   2.314   0.000  0.00  0.00           O+0
HETATM   43  O   UNK     0      19.075   3.828   0.000  0.00  0.00           O+0
HETATM   44  O   UNK     0      12.576  -1.624   0.000  0.00  0.00           O+0
CONECT    1    2   11                                                       
CONECT    2    1    3   31                                                  
CONECT    3    2    4   28   44                                             
CONECT    4    3    5                                                       
CONECT    5    4    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   15   27                                             
CONECT    9    8   10   12   26                                             
CONECT   10    9    5   11                                                  
CONECT   11   10    1                                                       
CONECT   12    9   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13    8   16                                                  
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   23   24   25                                             
CONECT   23   22                                                            
CONECT   24   22                                                            
CONECT   25   22                                                            
CONECT   26    9                                                            
CONECT   27    8                                                            
CONECT   28    3   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31   34                                                  
CONECT   31   30    2   32   33                                             
CONECT   32   31                                                            
CONECT   33   31                                                            
CONECT   34   30   35                                                       
CONECT   35   34   36   40                                                  
CONECT   36   35   37   43                                                  
CONECT   37   36   38   42                                                  
CONECT   38   37   39   41                                                  
CONECT   39   38   40                                                       
CONECT   40   39   35                                                       
CONECT   41   38                                                            
CONECT   42   37                                                            
CONECT   43   36                                                            
CONECT   44    3                                                            
MASTER        0    0    0    0    0    0    0    0   44    0   96    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₅H₅₆O₉

Average Mass

620.8240 Da

Monoisotopic Mass

620.39243 Da

IUPAC Name

(3S,6S,8S,11R,12S,15R,16R)-3-hydroxy-15-[(2R)-6-hydroxy-6-methyl-4-oxoheptan-2-yl]-7,7,12,16-tetramethyl-6-{[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy}tetracyclo[9.7.0.0^{3,8}.0^{12,16}]octadec-1(18)-en-14-one

Traditional Name

CAS Registry Number

Not Available

SMILES

C[C@H](CC(=O)CC(C)(C)O)[C@H]1C(=O)C[C@@]2(C)[C@@H]3CC[C@H]4C(C)(C)[C@H](CC[C@]4(O)CC3=CC[C@]12C)O[C@@H]1OC[C@H](O)[C@H](O)[C@H]1O

InChI Identifier

InChI=1S/C35H56O9/c1-19(14-21(36)16-31(2,3)41)27-23(37)17-34(7)22-8-9-25-32(4,5)26(44-30-29(40)28(39)24(38)18-43-30)11-13-35(25,42)15-20(22)10-12-33(27,34)6/h10,19,22,24-30,38-42H,8-9,11-18H2,1-7H3/t19-,22-,24+,25+,26+,27+,28+,29-,30+,33-,34+,35+/m1/s1

InChI Key

QOBLNULJOJPLNH-MWTKHQHPSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Actaea podocarpa	LOTUS Database	35616633
Actaea podocarpa DC.	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Triterpenoids

Alternative Parents

Substituents

Triterpenoid
Steroid
Glycosyl compound
O-glycosyl compound
Beta-hydroxy ketone
Monosaccharide
Oxane
Tertiary alcohol
Cyclic alcohol
Secondary alcohol
Ketone
Cyclic ketone
Polyol
Acetal
Oxacycle
Organoheterocyclic compound
Hydrocarbon derivative
Organooxygen compound
Organic oxide
Alcohol
Organic oxygen compound
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.94	ALOGPS
logP	2.51	ChemAxon
logS	-4.4	ALOGPS
pKa (Strongest Acidic)	12.24	ChemAxon
pKa (Strongest Basic)	-2.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	9	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	153.75 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	165.13 m³·mol⁻¹	ChemAxon
Polarizability	69.98 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00034645

Chemspider ID

17267391

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

16110012

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for (-)-Podocarpaside D (NP0073931)

MOL for NP0073931 ((-)-Podocarpaside D)

3D MOL for NP0073931 ((-)-Podocarpaside D)

3D SDF for NP0073931 ((-)-Podocarpaside D)

3D-SDF for NP0073931 ((-)-Podocarpaside D)

PDB for NP0073931 ((-)-Podocarpaside D)

3D PDB for NP0073931 ((-)-Podocarpaside D)

SMILES for NP0073931 ((-)-Podocarpaside D)

INCHI for NP0073931 ((-)-Podocarpaside D)

Structure for NP0073931 ((-)-Podocarpaside D)

3D Structure for NP0073931 ((-)-Podocarpaside D)