NP-MRD: Showing NP-Card for (-)-Gelomulide S (NP0073487)

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Record Information

Version

2.0

Created at

2022-04-28 18:43:48 UTC

Updated at

2022-04-28 18:43:48 UTC

NP-MRD ID

NP0073487

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(-)-Gelomulide S

Description

(1S,2R,3S,5S,7R,10S,11S,16R)-5-(acetyloxy)-10,11-dihydroxy-2,6,6,13-tetramethyl-14-oxo-15-oxatetracyclo[8.7.0.0²,⁷.0¹²,¹⁶]Heptadec-12-en-3-yl acetate belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety. (-)-Gelomulide S is found in Gelonium aequoreum. Based on a literature review very few articles have been published on (1S,2R,3S,5S,7R,10S,11S,16R)-5-(acetyloxy)-10,11-dihydroxy-2,6,6,13-tetramethyl-14-oxo-15-oxatetracyclo[8.7.0.0²,⁷.0¹²,¹⁶]Heptadec-12-en-3-yl acetate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282220432D          

 32 35  0  0  1  0            999 V2000
    3.6826    0.6076    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.9629   -0.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7875   -0.1416    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0168    0.6509    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7927    0.9312    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3340    1.1139    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2939   -0.7929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4311   -0.7991    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6190   -0.6539    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3387    0.1221    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8705    0.7528    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5266    0.2673    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.9948   -0.3634    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2751   -1.1393    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0872   -1.2846    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1827   -0.2182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0976    0.5577    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4342    1.1884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2463    1.0432    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7781    1.6739    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4978    2.4498    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6857    2.5951    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0296    3.0805    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9098    0.7029    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1901    1.4789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0022    1.6241    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6582    2.1096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0092   -1.0248    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5830   -0.5254    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0584    0.8980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8993   -1.4298    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7114   -1.5750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  1  6  1  1  0  0  0
  3  7  1  0  0  0  0
  2  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  6  0  0  0
  1 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  6  0  0  0
 14 15  1  0  0  0  0
  9 15  1  0  0  0  0
 13 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 12 19  1  0  0  0  0
 19 20  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
 17 24  1  1  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 16 28  1  0  0  0  0
 16 29  1  0  0  0  0
 12 30  1  6  0  0  0
  9 31  1  1  0  0  0
  8 32  1  6  0  0  0
M  END

     RDKit          3D

 66 69  0  0  0  0  0  0  0  0999 V2000
   -5.9337    0.4241    2.1837 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1917   -0.2947    1.1335 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7917   -1.1454    0.3918 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8435   -0.1208    0.8694 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1545   -0.8341   -0.1568 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.6617    0.0774   -1.2316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3503    0.7292   -0.9060 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.0199    1.5992   -1.9394 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9616    2.9885   -1.7607 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6098    3.9227   -2.8590 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2162    3.4609   -0.6309 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2626   -0.2496   -0.5244 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0000   -1.1112   -1.7139 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9380    0.5657   -0.0624 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7527    1.0916   -1.1873 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0536    0.3176   -1.3210 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8895    0.7568   -2.3286 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1466    1.0068   -1.8446 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2116    1.3133   -2.4483 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0503    0.8499   -0.4062 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0888    1.0676    0.6358 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7975    0.5186   -0.0707 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1225    0.3001    1.2105 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.7902   -0.6328    2.0105 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6987   -0.0859    1.0275 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0846    0.2496    2.2994 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6364   -1.6008    1.0459 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2029   -1.9792    1.2493 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7735   -1.0403    0.6389 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.0860   -1.7322    0.4255 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.5919   -2.0384    1.8538 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0744   -3.0142   -0.3035 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8908   -0.1135    2.3683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3019    0.4791    3.0812 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1392    1.4581    1.7893 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9321   -1.5009   -0.6339 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7004   -0.3654   -2.2549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4096    0.9265   -1.2856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5367    1.3497    0.0135 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0647    4.7325   -2.5329 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5719    4.3970   -3.1856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2082    3.3906   -3.7377 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3790   -0.5717   -2.5751 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0168   -1.4849   -2.0431 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5885   -2.0097   -1.5450 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4691    1.4849    0.4216 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2614    1.1764   -2.1448 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1001    2.1398   -0.9332 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8575   -0.7602   -1.5358 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9970    1.5624    0.1854 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4584    0.1090    1.0565 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6970    1.6660    1.4651 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1294    1.2455    1.8460 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5362   -0.1776    2.4757 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1806    1.2142    2.4276 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2217   -1.8753    1.9799 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1623   -2.1021    0.2433 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1003   -3.0366    0.9342 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0249   -2.0181    2.3664 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0030   -0.2589    1.4306 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0213   -2.8778    2.2768 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6774   -2.1649    1.8741 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3445   -1.1464    2.4846 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7241   -2.9549   -1.2291 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5648   -3.8581    0.2727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1258   -3.4149   -0.6364 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
  9 11  2  0
  7 12  1  0
 12 13  1  6
 12 29  1  0
 29 28  1  0
 28 27  1  0
 27 25  1  0
 25 26  1  1
 25 23  1  0
 23 24  1  0
 23 22  1  0
 22 20  2  0
 20 21  1  0
 20 18  1  0
 18 19  2  0
 18 17  1  0
 17 16  1  0
 16 15  1  0
 15 14  1  0
 29 30  1  0
 30 31  1  1
 30 32  1  0
 30  5  1  0
 14 12  1  0
 14 25  1  0
 16 22  1  0
  1 33  1  0
  1 34  1  0
  1 35  1  0
  5 36  1  6
  6 37  1  0
  6 38  1  0
  7 39  1  1
 10 40  1  0
 10 41  1  0
 10 42  1  0
 13 43  1  0
 13 44  1  0
 13 45  1  0
 29 60  1  1
 28 58  1  0
 28 59  1  0
 27 56  1  0
 27 57  1  0
 26 55  1  0
 23 53  1  1
 24 54  1  0
 21 50  1  0
 21 51  1  0
 21 52  1  0
 16 49  1  6
 15 47  1  0
 15 48  1  0
 14 46  1  1
 31 61  1  0
 31 62  1  0
 31 63  1  0
 32 64  1  0
 32 65  1  0
 32 66  1  0
M  END


  Mrv1652304282220432D          

 32 35  0  0  1  0            999 V2000
    3.6826    0.6076    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.9629   -0.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7875   -0.1416    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0168    0.6509    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7927    0.9312    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3340    1.1139    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2939   -0.7929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4311   -0.7991    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6190   -0.6539    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3387    0.1221    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8705    0.7528    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5266    0.2673    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.9948   -0.3634    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2751   -1.1393    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0872   -1.2846    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1827   -0.2182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0976    0.5577    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4342    1.1884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2463    1.0432    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7781    1.6739    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4978    2.4498    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6857    2.5951    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0296    3.0805    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9098    0.7029    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1901    1.4789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0022    1.6241    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6582    2.1096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0092   -1.0248    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5830   -0.5254    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0584    0.8980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8993   -1.4298    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7114   -1.5750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  1  6  1  1  0  0  0
  3  7  1  0  0  0  0
  2  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  6  0  0  0
  1 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  6  0  0  0
 14 15  1  0  0  0  0
  9 15  1  0  0  0  0
 13 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 12 19  1  0  0  0  0
 19 20  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
 17 24  1  1  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 16 28  1  0  0  0  0
 16 29  1  0  0  0  0
 12 30  1  6  0  0  0
  9 31  1  1  0  0  0
  8 32  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0073487

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)O[C@H]1C[C@H](OC(C)=O)[C@]2(C)[C@H](CC[C@@]3(O)[C@@H](O)C4=C(C)C(=O)O[C@@H]4C[C@@H]23)C1(C)C

> <INCHI_IDENTIFIER>
InChI=1S/C24H34O8/c1-11-19-14(32-21(11)28)9-16-23(6)15(7-8-24(16,29)20(19)27)22(4,5)17(30-12(2)25)10-18(23)31-13(3)26/h14-18,20,27,29H,7-10H2,1-6H3/t14-,15-,16+,17+,18+,20+,23-,24+/m1/s1

> <INCHI_KEY>
YGBRRZUVVJINOK-PTEOULHRSA-N

> <FORMULA>
C24H34O8

> <MOLECULAR_WEIGHT>
450.528

> <EXACT_MASS>
450.225368055

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
66

> <JCHEM_AVERAGE_POLARIZABILITY>
47.68830731041081

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2R,3S,5S,7R,10S,11S,16R)-3-(acetyloxy)-10,11-dihydroxy-2,6,6,13-tetramethyl-14-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadec-12-en-5-yl acetate

> <ALOGPS_LOGP>
1.60

> <JCHEM_LOGP>
1.1730651466666668

> <ALOGPS_LOGS>
-3.25

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.475917745780976

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.072487751055567

> <JCHEM_PKA_STRONGEST_BASIC>
-3.441476473422349

> <JCHEM_POLAR_SURFACE_AREA>
119.36000000000001

> <JCHEM_REFRACTIVITY>
112.2239

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.52e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2R,3S,5S,7R,10S,11S,16R)-3-(acetyloxy)-10,11-dihydroxy-2,6,6,13-tetramethyl-14-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadec-12-en-5-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       6.874   1.134   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.398  -0.314   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       8.937  -0.264   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       9.365   1.215   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      10.813   1.738   0.000  0.00  0.00           O+0
HETATM    6  O   UNK     0       8.090   2.079   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       9.882  -1.480   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.405  -1.492   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.889  -1.221   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.366   0.228   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.358   1.405   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.850   0.499   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.857  -0.678   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.380  -2.127   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       3.896  -2.398   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.341  -0.407   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -0.182   1.041   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       0.810   2.218   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.326   1.947   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       3.319   3.125   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       2.796   4.573   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       1.280   4.844   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       3.789   5.750   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      -1.698   1.312   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      -2.221   2.761   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -3.737   3.032   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      -1.229   3.938   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       0.017  -1.913   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -1.088  -0.981   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       3.842   1.676   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       5.412  -2.669   0.000  0.00  0.00           O+0
HETATM   32  O   UNK     0       6.928  -2.940   0.000  0.00  0.00           O+0
CONECT    1    2    6   11                                                  
CONECT    2    1    3    8                                                  
CONECT    3    2    4    7                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    1                                                       
CONECT    7    3                                                            
CONECT    8    2    9   32                                                  
CONECT    9    8   10   15   31                                             
CONECT   10    9   11   12                                                  
CONECT   11   10    1                                                       
CONECT   12   10   13   19   30                                             
CONECT   13   12   14   16                                                  
CONECT   14   13   15                                                       
CONECT   15   14    9                                                       
CONECT   16   13   17   28   29                                             
CONECT   17   16   18   24                                                  
CONECT   18   17   19                                                       
CONECT   19   18   12   20                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21                                                            
CONECT   24   17   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25                                                            
CONECT   28   16                                                            
CONECT   29   16                                                            
CONECT   30   12                                                            
CONECT   31    9                                                            
CONECT   32    8                                                            
MASTER        0    0    0    0    0    0    0    0   32    0   70    0
END

View in JSmol

Synonyms

Value	Source
(1S,2R,3S,5S,7R,10S,11S,16R)-5-(Acetyloxy)-10,11-dihydroxy-2,6,6,13-tetramethyl-14-oxo-15-oxatetracyclo[8.7.0.0,.0,]heptadec-12-en-3-yl acetic acid	Generator

Chemical Formula

C₂₄H₃₄O₈

Average Mass

450.5280 Da

Monoisotopic Mass

450.22537 Da

IUPAC Name

(1S,2R,3S,5S,7R,10S,11S,16R)-3-(acetyloxy)-10,11-dihydroxy-2,6,6,13-tetramethyl-14-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadec-12-en-5-yl acetate

Traditional Name

(1S,2R,3S,5S,7R,10S,11S,16R)-3-(acetyloxy)-10,11-dihydroxy-2,6,6,13-tetramethyl-14-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadec-12-en-5-yl acetate

CAS Registry Number

Not Available

SMILES

CC(=O)O[C@H]1C[C@H](OC(C)=O)[C@]2(C)[C@H](CC[C@@]3(O)[C@@H](O)C4=C(C)C(=O)O[C@@H]4C[C@@H]23)C1(C)C

InChI Identifier

InChI=1S/C24H34O8/c1-11-19-14(32-21(11)28)9-16-23(6)15(7-8-24(16,29)20(19)27)22(4,5)17(30-12(2)25)10-18(23)31-13(3)26/h14-18,20,27,29H,7-10H2,1-6H3/t14-,15-,16+,17+,18+,20+,23-,24+/m1/s1

InChI Key

YGBRRZUVVJINOK-PTEOULHRSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Suregada aequorea	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Diterpene lactones

Alternative Parents

Substituents

Diterpene lactone
Abietane diterpenoid
Diterpenoid
Naphthofuran
Tricarboxylic acid or derivatives
2-furanone
Cyclic alcohol
Dihydrofuran
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Tertiary alcohol
1,2-diol
Carboxylic acid ester
Secondary alcohol
Lactone
Oxacycle
Carboxylic acid derivative
Organoheterocyclic compound
Hydrocarbon derivative
Organic oxide
Alcohol
Carbonyl group
Organic oxygen compound
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.6	ALOGPS
logP	1.17	ChemAxon
logS	-3.2	ALOGPS
pKa (Strongest Acidic)	12.07	ChemAxon
pKa (Strongest Basic)	-3.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	119.36 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	112.22 m³·mol⁻¹	ChemAxon
Polarizability	47.69 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

24775232

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for (-)-Gelomulide S (NP0073487)

MOL for NP0073487 ((-)-Gelomulide S)

3D MOL for NP0073487 ((-)-Gelomulide S)

3D SDF for NP0073487 ((-)-Gelomulide S)

3D-SDF for NP0073487 ((-)-Gelomulide S)

PDB for NP0073487 ((-)-Gelomulide S)

3D PDB for NP0073487 ((-)-Gelomulide S)

SMILES for NP0073487 ((-)-Gelomulide S)

INCHI for NP0073487 ((-)-Gelomulide S)

Structure for NP0073487 ((-)-Gelomulide S)

3D Structure for NP0073487 ((-)-Gelomulide S)