NP-MRD: Showing NP-Card for (-)-Baenzigeroside A (NP0072749)

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Record Information

Version

2.0

Created at

2022-04-28 18:02:47 UTC

Updated at

2022-04-28 18:02:47 UTC

NP-MRD ID

NP0072749

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(-)-Baenzigeroside A

Description

Baenzigeroside A belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol. (-)-Baenzigeroside A is found in Tinospora baenzigeri . Based on a literature review very few articles have been published on Baenzigeroside A.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282220022D          

 37 42  0  0  1  0            999 V2000
    5.1707    3.3429    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
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M  END

     RDKit          3D

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M  END


  Mrv1652304282220022D          

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 23 30  1  1  0  0  0
 30 31  1  0  0  0  0
  8 32  1  6  0  0  0
  1 33  1  1  0  0  0
 33 34  1  0  0  0  0
 34 35  2  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 33 37  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0072749

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@]12CC=C3C(=O)O[C@@H](C[C@@]3(C)[C@@H]1C[C@H]1COC(=O)[C@]21O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)C1=COC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C26H32O11/c1-24-8-15(12-4-6-33-10-12)35-21(31)14(24)3-5-25(2)17(24)7-13-11-34-23(32)26(13,25)37-22-20(30)19(29)18(28)16(9-27)36-22/h3-4,6,10,13,15-20,22,27-30H,5,7-9,11H2,1-2H3/t13-,15-,16+,17-,18+,19-,20+,22-,24+,25+,26-/m0/s1

> <INCHI_KEY>
BGYRHGJBLWSBEE-HFTYGKCJSA-N

> <FORMULA>
C26H32O11

> <MOLECULAR_WEIGHT>
520.531

> <EXACT_MASS>
520.19446185

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
69

> <JCHEM_AVERAGE_POLARIZABILITY>
51.61980718009816

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1S,2S,4S,10R,11R,15S)-4-(furan-3-yl)-2,10-dimethyl-11-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-5,13-dioxatetracyclo[8.6.0.0^{2,7}.0^{11,15}]hexadec-7-ene-6,12-dione

> <ALOGPS_LOGP>
0.92

> <JCHEM_LOGP>
0.3515245153333334

> <ALOGPS_LOGS>
-2.67

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.199596881242929

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.209292738908015

> <JCHEM_PKA_STRONGEST_BASIC>
-2.863993802143594

> <JCHEM_POLAR_SURFACE_AREA>
165.12

> <JCHEM_REFRACTIVITY>
122.81279999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.11e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2S,4S,10R,11R,15S)-4-(furan-3-yl)-2,10-dimethyl-11-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-5,13-dioxatetracyclo[8.6.0.0^{2,7}.0^{11,15}]hexadec-7-ene-6,12-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       9.652   6.240   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      10.347   4.866   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       9.505   3.577   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      10.200   2.203   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       7.967   3.662   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       7.125   2.372   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.587   2.457   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.892   3.832   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.734   5.121   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       7.272   5.036   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       8.114   6.325   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.577   6.410   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.769   6.320   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       3.329   5.772   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       3.406   4.234   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.966   3.686   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       0.527   3.139   0.000  0.00  0.00           O+0
HETATM   18  O   UNK     0       1.000   4.886   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       1.843   6.175   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       3.482   2.696   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       2.188   1.861   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       0.818   2.564   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      -0.476   1.729   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -0.400   0.191   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       0.970  -0.512   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       2.264   0.323   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       3.634  -0.380   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0       1.046  -2.050   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0      -1.694  -0.644   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0      -1.846   2.432   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0      -3.140   1.597   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       4.336   2.395   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      10.494   7.529   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       9.947   8.968   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      11.146   9.934   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0      12.435   9.092   0.000  0.00  0.00           O+0
HETATM   37  C   UNK     0      12.032   7.605   0.000  0.00  0.00           C+0
CONECT    1    2   11   33                                                  
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   15   32                                             
CONECT    9    8   10   13                                                  
CONECT   10    9    5   11   12                                             
CONECT   11   10    1                                                       
CONECT   12   10                                                            
CONECT   13    9   14                                                       
CONECT   14   13   15   19                                                  
CONECT   15   14    8   16   20                                             
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   14                                                       
CONECT   20   15   21                                                       
CONECT   21   20   22   26                                                  
CONECT   22   21   23                                                       
CONECT   23   22   24   30                                                  
CONECT   24   23   25   29                                                  
CONECT   25   24   26   28                                                  
CONECT   26   25   21   27                                                  
CONECT   27   26                                                            
CONECT   28   25                                                            
CONECT   29   24                                                            
CONECT   30   23   31                                                       
CONECT   31   30                                                            
CONECT   32    8                                                            
CONECT   33    1   34   37                                                  
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   33                                                       
MASTER        0    0    0    0    0    0    0    0   37    0   84    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₆H₃₂O₁₁

Average Mass

520.5310 Da

Monoisotopic Mass

520.19446 Da

IUPAC Name

(1S,2S,4S,10R,11R,15S)-4-(furan-3-yl)-2,10-dimethyl-11-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-5,13-dioxatetracyclo[8.6.0.0^{2,7}.0^{11,15}]hexadec-7-ene-6,12-dione

Traditional Name

(1S,2S,4S,10R,11R,15S)-4-(furan-3-yl)-2,10-dimethyl-11-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-5,13-dioxatetracyclo[8.6.0.0^{2,7}.0^{11,15}]hexadec-7-ene-6,12-dione

CAS Registry Number

Not Available

SMILES

C[C@@]12CC=C3C(=O)O[C@@H](C[C@@]3(C)[C@@H]1C[C@H]1COC(=O)[C@]21O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)C1=COC=C1

InChI Identifier

InChI=1S/C26H32O11/c1-24-8-15(12-4-6-33-10-12)35-21(31)14(24)3-5-25(2)17(24)7-13-11-34-23(32)26(13,25)37-22-20(30)19(29)18(28)16(9-27)36-22/h3-4,6,10,13,15-20,22,27-30H,5,7-9,11H2,1-2H3/t13-,15-,16+,17-,18+,19-,20+,22-,24+,25+,26-/m0/s1

InChI Key

BGYRHGJBLWSBEE-HFTYGKCJSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Tinospora baenzigeri	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acyl glycosides

Direct Parent

Fatty acyl glycosides of mono- and disaccharides

Alternative Parents

Substituents

Fatty acyl glycoside of mono- or disaccharide
Hexose monosaccharide
Glycosyl compound
O-glycosyl compound
Delta valerolactone
Delta_valerolactone
Dicarboxylic acid or derivatives
Gamma butyrolactone
Monosaccharide
Oxane
Oxolane
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Heteroaromatic compound
Furan
Secondary alcohol
Lactone
Carboxylic acid ester
Polyol
Organoheterocyclic compound
Oxacycle
Carboxylic acid derivative
Acetal
Carbonyl group
Organic oxide
Organic oxygen compound
Alcohol
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.92	ALOGPS
logP	0.35	ChemAxon
logS	-2.7	ALOGPS
pKa (Strongest Acidic)	12.21	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	165.12 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	122.81 m³·mol⁻¹	ChemAxon
Polarizability	51.62 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00032753

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101009665

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for (-)-Baenzigeroside A (NP0072749)

MOL for NP0072749 ((-)-Baenzigeroside A)

3D MOL for NP0072749 ((-)-Baenzigeroside A)

3D SDF for NP0072749 ((-)-Baenzigeroside A)

3D-SDF for NP0072749 ((-)-Baenzigeroside A)

PDB for NP0072749 ((-)-Baenzigeroside A)

3D PDB for NP0072749 ((-)-Baenzigeroside A)

SMILES for NP0072749 ((-)-Baenzigeroside A)

INCHI for NP0072749 ((-)-Baenzigeroside A)

Structure for NP0072749 ((-)-Baenzigeroside A)

3D Structure for NP0072749 ((-)-Baenzigeroside A)