| Record Information |
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| Version | 2.0 |
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| Created at | 2022-04-28 17:20:14 UTC |
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| Updated at | 2022-04-28 17:20:14 UTC |
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| NP-MRD ID | NP0071946 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | Agatharesinol |
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| Description | Agatharesinol belongs to the class of organic compounds known as lignans, neolignans and related compounds. These are plant products of low molecular weight formed primarily from oxidative coupling of two p-propylphenol moieties. They can also be described as micromolecules with two phenylpropanoid units coupled together. They can be attached in various manners, like C5-C5', C8-C8'. Most known natural lignans are oxidized at C9 and C9´ and, based upon the way in which oxygen is incorporated into the skeleton and on the cyclization patterns, a wide range of lignans of very different structural types can be formed. Agatharesinol is found in Agathis australis , Agathis vitiensis, Chamaecyparis pisifera, Cryptomeria japonica, Metasequoia glyptostroboides, Metasequoia glyptostroboides Hu et Cheng., Sequoiadendron gigantea and Taxodium distichum. Agatharesinol was first documented in 2005 (PMID: 17191998). Based on a literature review a small amount of articles have been published on agatharesinol (PMID: 34963379) (PMID: 28314158) (PMID: 26895336) (PMID: 23157009). |
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| Structure | OC[C@@H](O)[C@@H](\C=C\C1=CC=C(O)C=C1)C1=CC=C(O)C=C1 InChI=1S/C17H18O4/c18-11-17(21)16(13-4-8-15(20)9-5-13)10-3-12-1-6-14(19)7-2-12/h1-10,16-21H,11H2/b10-3+/t16-,17+/m0/s1 |
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| Synonyms | Not Available |
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| Chemical Formula | C17H18O4 |
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| Average Mass | 286.3270 Da |
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| Monoisotopic Mass | 286.12051 Da |
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| IUPAC Name | (2S,3S,4E)-3,5-bis(4-hydroxyphenyl)pent-4-ene-1,2-diol |
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| Traditional Name | agatharesinol |
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| CAS Registry Number | Not Available |
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| SMILES | OC[C@@H](O)[C@@H](\C=C\C1=CC=C(O)C=C1)C1=CC=C(O)C=C1 |
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| InChI Identifier | InChI=1S/C17H18O4/c18-11-17(21)16(13-4-8-15(20)9-5-13)10-3-12-1-6-14(19)7-2-12/h1-10,16-21H,11H2/b10-3+/t16-,17+/m0/s1 |
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| InChI Key | DVUXXXYVVWRAIA-UDEVJOAWSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as lignans, neolignans and related compounds. These are plant products of low molecular weight formed primarily from oxidative coupling of two p-propylphenol moieties. They can also be described as micromolecules with two phenylpropanoid units coupled together. They can be attached in various manners, like C5-C5', C8-C8'. Most known natural lignans are oxidized at C9 and C9´ and, based upon the way in which oxygen is incorporated into the skeleton and on the cyclization patterns, a wide range of lignans of very different structural types can be formed. |
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| Kingdom | Organic compounds |
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| Super Class | Lignans, neolignans and related compounds |
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| Class | Not Available |
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| Sub Class | Not Available |
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| Direct Parent | Lignans, neolignans and related compounds |
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| Alternative Parents | |
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| Substituents | - Norlignan skeleton
- Cinnamylphenol
- Linear 1,3-diarylpropanoid
- Fatty alcohol
- Styrene
- 1-hydroxy-2-unsubstituted benzenoid
- Phenol
- Monocyclic benzene moiety
- Fatty acyl
- Benzenoid
- 1,2-diol
- Secondary alcohol
- Alcohol
- Organooxygen compound
- Hydrocarbon derivative
- Organic oxygen compound
- Primary alcohol
- Aromatic homomonocyclic compound
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| Molecular Framework | Aromatic homomonocyclic compounds |
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| External Descriptors | |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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| General References | - Thamnarak W, Eurtivong C, Pollawatn R, Ruchirawat S, Thasana N: Two new nor-lignans, siamensinols A and B, from Selaginella siamensis Hieron. and their biological activities. Nat Prod Res. 2021 Dec 29:1-9. doi: 10.1080/14786419.2021.2022664. [PubMed:34963379 ]
- Kato-Noguchi H, Nakamura K, Ohno O, Suenaga K, Okuda N: Asparagus decline: Autotoxicity and autotoxic compounds in asparagus rhizomes. J Plant Physiol. 2017 Jun;213:23-29. doi: 10.1016/j.jplph.2017.02.011. Epub 2017 Mar 1. [PubMed:28314158 ]
- Nakaba S, Arakawa I, Morimoto H, Nakada R, Bito N, Imai T, Funada R: Agatharesinol biosynthesis-related changes of ray parenchyma in sapwood sticks of Cryptomeria japonica during cell death. Planta. 2016 May;243(5):1225-36. doi: 10.1007/s00425-016-2473-y. Epub 2016 Feb 19. [PubMed:26895336 ]
- Li XN, Chu C, Cheng DP, Tong SQ, Yan JZ: Norlignans from Asparagus cochinchinensis. Nat Prod Commun. 2012 Oct;7(10):1357-8. [PubMed:23157009 ]
- Zhang YM, Tan NH, Yang YB, Lu Y, Cao P, Wu YS: Norlignans from Sequoia sempervirens. Chem Biodivers. 2005 Apr;2(4):497-505. doi: 10.1002/cbdv.200590030. [PubMed:17191998 ]
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