NP-MRD: Showing NP-Card for (25S)-Kingianoside E (NP0070668)

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Record Information

Version

2.0

Created at

2022-04-28 16:07:45 UTC

Updated at

2022-04-28 16:07:45 UTC

NP-MRD ID

NP0070668

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(25S)-Kingianoside E

Description

(1R,2S,4S,6R,7S,8R,9S,12S,13R,16S)-16-{[(2R,3R,4S,5R,6R)-5-{[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-6-hydroxy-7,9,13-trimethyl-6-[(3S)-3-methyl-4-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}butyl]-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]Icos-18-en-10-one belongs to the class of organic compounds known as steroidal saponins. These are saponins in which the aglycone moiety is a steroid. The steroidal aglycone is usually a spirostane, furostane, spirosolane, solanidane, or curcubitacin derivative. (25S)-Kingianoside E is found in Polygonatum kingianum and Polygonatum kingianum COLL.et HEMSL. . Based on a literature review very few articles have been published on (1R,2S,4S,6R,7S,8R,9S,12S,13R,16S)-16-{[(2R,3R,4S,5R,6R)-5-{[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-6-hydroxy-7,9,13-trimethyl-6-[(3S)-3-methyl-4-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}butyl]-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]Icos-18-en-10-one.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282218072D          

 76 84  0  0  1  0            999 V2000
    8.1476    0.4152    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4789    1.1708    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
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    7.1703    1.7446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6816    2.4093    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8616    2.3185    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5303    1.5629    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.0190    0.8982    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.8390    0.9891    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.3276    0.3244    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5077    0.2335    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6877    0.1427    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8677    0.0518    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5364   -0.7037    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    9.2989    1.2617    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    9.4563   -0.1586    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.9450   -0.8233    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.7649   -0.7324    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.0962    0.0231    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.6076    0.6878    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.9389    1.4434    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.9162    0.1140    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.2536   -1.3971    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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   14.5335   -1.0337    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.8709   -2.5448    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.2310   -2.7265    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.7196   -3.3912    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   13.5396   -3.3004    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.0283   -3.9650    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   13.6970   -4.7206    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   12.8770   -4.8115    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   12.3883   -4.1468    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.5684   -4.2376    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.5457   -5.5670    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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   14.8483   -3.8742    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.3370   -4.5389    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    8.7937   -1.6697    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  4  9  1  0  0  0  0
  9 10  1  0  0  0  0
  1 10  1  0  0  0  0
  9 11  1  1  0  0  0
  8 12  1  1  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
  7 16  1  0  0  0  0
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 17 18  1  0  0  0  0
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 15 19  1  0  0  0  0
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 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 18 22  1  1  0  0  0
 21 23  1  6  0  0  0
 21 24  1  1  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 29 28  1  6  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 29 34  1  0  0  0  0
 34 35  1  1  0  0  0
 33 36  1  6  0  0  0
 32 37  1  1  0  0  0
 31 38  1  6  0  0  0
 38 39  1  0  0  0  0
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 20 41  1  6  0  0  0
 15 42  1  1  0  0  0
  2 43  1  1  0  0  0
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 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
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 47 52  1  1  0  0  0
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 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
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 57 59  1  6  0  0  0
 59 60  1  0  0  0  0
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 66 73  1  6  0  0  0
 73 74  1  0  0  0  0
 46 75  1  1  0  0  0
 75 76  1  0  0  0  0
M  END

     RDKit          3D

158166  0  0  0  0  0  0  0  0999 V2000
    7.6405    2.1422   -0.9721 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8308    2.0741   -0.0841 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.8335    1.2535    1.1169 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.5580   -2.3267    0.9860 C   0  0  1  0  0  0  0  0  0  0  0  0
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    0.0563   -2.9655    1.8539 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.5745   -2.2137   -0.6349 C   0  0  1  0  0  0  0  0  0  0  0  0
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   -4.8213   -1.8315   -1.0751 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.2197   -1.0472   -2.1188 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6411    0.2215   -1.8042 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.5815    1.1526   -1.3201 C   0  0  0  0  0  0  0  0  0  0  0  0
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  -13.1910    0.0086    1.0654 C   0  0  2  0  0  0  0  0  0  0  0  0
  -13.4108    0.8445   -0.0522 O   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0317    0.5495    1.8587 C   0  0  1  0  0  0  0  0  0  0  0  0
  -12.0482    0.0142    3.1327 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4076   -0.6239    0.4025 C   0  0  1  0  0  0  0  0  0  0  0  0
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    2.1354   -1.0132   -1.1643 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6053   -1.3743   -1.2195 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1021   -1.6541   -2.2865 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2939   -1.3448    0.0733 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3068   -0.0026    0.7204 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6380   -2.0358    0.0613 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.7790   -1.0924   -0.3421 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.6417   -1.7623   -1.4115 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0281    1.7914   -1.0062 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1364    1.7399   -0.2169 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652304282218072D          

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   13.6970   -4.7206    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   12.8770   -4.8115    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   12.3883   -4.1468    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.5684   -4.2376    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.5457   -5.5670    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.1857   -5.3853    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.8483   -3.8742    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.3370   -4.5389    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.6136   -1.5788    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7937   -1.6697    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  4  9  1  0  0  0  0
  9 10  1  0  0  0  0
  1 10  1  0  0  0  0
  9 11  1  1  0  0  0
  8 12  1  1  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
  7 16  1  0  0  0  0
 16 17  1  1  0  0  0
 17 18  1  0  0  0  0
 19 18  1  1  0  0  0
 15 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 18 22  1  1  0  0  0
 21 23  1  6  0  0  0
 21 24  1  1  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 29 28  1  6  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 29 34  1  0  0  0  0
 34 35  1  1  0  0  0
 33 36  1  6  0  0  0
 32 37  1  1  0  0  0
 31 38  1  6  0  0  0
 38 39  1  0  0  0  0
 26 40  1  1  0  0  0
 20 41  1  6  0  0  0
 15 42  1  1  0  0  0
  2 43  1  1  0  0  0
 44 43  1  1  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
 44 49  1  0  0  0  0
 49 50  1  6  0  0  0
 48 51  1  6  0  0  0
 47 52  1  1  0  0  0
 53 52  1  6  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
 57 58  1  0  0  0  0
 53 58  1  0  0  0  0
 57 59  1  6  0  0  0
 59 60  1  0  0  0  0
 56 61  1  1  0  0  0
 55 62  1  6  0  0  0
 54 63  1  1  0  0  0
 64 63  1  6  0  0  0
 64 65  1  0  0  0  0
 65 66  1  0  0  0  0
 66 67  1  0  0  0  0
 67 68  1  0  0  0  0
 68 69  1  0  0  0  0
 64 69  1  0  0  0  0
 69 70  1  1  0  0  0
 68 71  1  6  0  0  0
 67 72  1  1  0  0  0
 66 73  1  6  0  0  0
 73 74  1  0  0  0  0
 46 75  1  1  0  0  0
 75 76  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0070668

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@H](CC[C@@]1(O)O[C@H]2C[C@H]3[C@@H]4CC=C5C[C@H](CC[C@]5(C)[C@H]4CC(=O)[C@]3(C)[C@H]2[C@@H]1C)O[C@@H]1O[C@H](CO)[C@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@H]1O)CO[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C51H82O25/c1-19(18-68-45-40(64)36(60)33(57)27(14-52)70-45)7-10-51(67)20(2)32-26(76-51)12-25-23-6-5-21-11-22(8-9-49(21,3)24(23)13-31(56)50(25,32)4)69-46-42(66)39(63)43(30(17-55)73-46)74-48-44(38(62)35(59)29(16-54)72-48)75-47-41(65)37(61)34(58)28(15-53)71-47/h5,19-20,22-30,32-48,52-55,57-67H,6-18H2,1-4H3/t19-,20-,22-,23+,24-,25-,26-,27+,28+,29+,30+,32-,33+,34+,35+,36-,37-,38-,39-,40+,41+,42+,43-,44+,45+,46+,47-,48-,49-,50+,51+/m0/s1

> <INCHI_KEY>
UOYJKVXIKOXLKU-HMKCXMMYSA-N

> <FORMULA>
C51H82O25

> <MOLECULAR_WEIGHT>
1095.192

> <EXACT_MASS>
1094.51451814

> <JCHEM_ACCEPTOR_COUNT>
25

> <JCHEM_ATOM_COUNT>
158

> <JCHEM_AVERAGE_POLARIZABILITY>
113.42102000553547

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
15

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,2S,4S,6R,7S,8R,9S,12S,13R,16S)-16-{[(2R,3R,4S,5R,6R)-5-{[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-6-hydroxy-7,9,13-trimethyl-6-[(3S)-3-methyl-4-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}butyl]-5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-en-10-one

> <ALOGPS_LOGP>
-1.02

> <JCHEM_LOGP>
-3.985024062333333

> <ALOGPS_LOGS>
-2.62

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
9

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
11.957179777990286

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.504788112928102

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6786119366911016

> <JCHEM_POLAR_SURFACE_AREA>
403.5900000000001

> <JCHEM_REFRACTIVITY>
254.12240000000014

> <JCHEM_ROTATABLE_BOND_COUNT>
16

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.60e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2S,4S,6R,7S,8R,9S,12S,13R,16S)-16-{[(2R,3R,4S,5R,6R)-5-{[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-6-hydroxy-7,9,13-trimethyl-6-[(3S)-3-methyl-4-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}butyl]-5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-en-10-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0      15.209   0.775   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      15.827   2.185   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      14.915   3.426   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      13.384   3.257   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      12.472   4.497   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      10.942   4.328   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      10.323   2.917   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      11.235   1.677   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      12.766   1.846   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      13.678   0.606   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      12.148   0.436   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      10.617   0.266   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       9.086   0.097   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       8.468  -1.314   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       8.174   1.337   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       8.793   2.748   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       7.642   3.772   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.313   2.994   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       6.642   1.490   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       5.312   0.712   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       4.162   1.736   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       4.781   3.147   0.000  0.00  0.00           O+0
HETATM   23  O   UNK     0       3.013   0.711   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       2.690   2.189   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       1.562   1.140   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.090   1.592   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -1.037   0.543   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0      -2.510   0.995   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0      -3.637  -0.053   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      -3.293  -1.554   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0      -4.421  -2.603   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      -5.893  -2.151   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -6.237  -0.650   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      -5.109   0.399   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      -5.454   1.900   0.000  0.00  0.00           O+0
HETATM   36  O   UNK     0      -7.709  -0.198   0.000  0.00  0.00           O+0
HETATM   37  O   UNK     0      -7.020  -3.200   0.000  0.00  0.00           O+0
HETATM   38  C   UNK     0      -4.076  -4.104   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0      -5.204  -5.153   0.000  0.00  0.00           O+0
HETATM   40  C   UNK     0      -0.254   3.093   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0       5.160  -0.820   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0       7.412  -0.001   0.000  0.00  0.00           C+0
HETATM   43  O   UNK     0      17.358   2.355   0.000  0.00  0.00           O+0
HETATM   44  C   UNK     0      18.270   1.114   0.000  0.00  0.00           C+0
HETATM   45  O   UNK     0      17.652  -0.296   0.000  0.00  0.00           O+0
HETATM   46  C   UNK     0      18.564  -1.537   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      20.095  -1.367   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      20.713   0.043   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      19.801   1.284   0.000  0.00  0.00           C+0
HETATM   50  O   UNK     0      20.419   2.694   0.000  0.00  0.00           O+0
HETATM   51  O   UNK     0      22.244   0.213   0.000  0.00  0.00           O+0
HETATM   52  O   UNK     0      21.007  -2.608   0.000  0.00  0.00           O+0
HETATM   53  C   UNK     0      22.537  -2.438   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0      23.450  -3.679   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0      24.980  -3.510   0.000  0.00  0.00           C+0
HETATM   56  C   UNK     0      25.599  -2.099   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0      24.686  -0.858   0.000  0.00  0.00           C+0
HETATM   58  O   UNK     0      23.156  -1.028   0.000  0.00  0.00           O+0
HETATM   59  C   UNK     0      25.305   0.552   0.000  0.00  0.00           C+0
HETATM   60  O   UNK     0      24.393   1.793   0.000  0.00  0.00           O+0
HETATM   61  O   UNK     0      27.129  -1.930   0.000  0.00  0.00           O+0
HETATM   62  O   UNK     0      25.892  -4.750   0.000  0.00  0.00           O+0
HETATM   63  O   UNK     0      22.831  -5.089   0.000  0.00  0.00           O+0
HETATM   64  C   UNK     0      23.743  -6.330   0.000  0.00  0.00           C+0
HETATM   65  O   UNK     0      25.274  -6.161   0.000  0.00  0.00           O+0
HETATM   66  C   UNK     0      26.186  -7.401   0.000  0.00  0.00           C+0
HETATM   67  C   UNK     0      25.568  -8.812   0.000  0.00  0.00           C+0
HETATM   68  C   UNK     0      24.037  -8.981   0.000  0.00  0.00           C+0
HETATM   69  C   UNK     0      23.125  -7.741   0.000  0.00  0.00           C+0
HETATM   70  O   UNK     0      21.594  -7.910   0.000  0.00  0.00           O+0
HETATM   71  O   UNK     0      23.419 -10.392   0.000  0.00  0.00           O+0
HETATM   72  O   UNK     0      26.480 -10.053   0.000  0.00  0.00           O+0
HETATM   73  C   UNK     0      27.717  -7.232   0.000  0.00  0.00           C+0
HETATM   74  O   UNK     0      28.629  -8.473   0.000  0.00  0.00           O+0
HETATM   75  C   UNK     0      17.945  -2.947   0.000  0.00  0.00           C+0
HETATM   76  O   UNK     0      16.415  -3.117   0.000  0.00  0.00           O+0
CONECT    1    2   10                                                       
CONECT    2    1    3   43                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5    9                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8   16                                                  
CONECT    8    7    9   12                                                  
CONECT    9    8    4   10   11                                             
CONECT   10    9    1                                                       
CONECT   11    9                                                            
CONECT   12    8   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16   19   42                                             
CONECT   16   15    7   17                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19   22                                                  
CONECT   19   18   15   20                                                  
CONECT   20   19   21   41                                                  
CONECT   21   20   22   23   24                                             
CONECT   22   21   18                                                       
CONECT   23   21                                                            
CONECT   24   21   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27   40                                                  
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30   34                                                  
CONECT   30   29   31                                                       
CONECT   31   30   32   38                                                  
CONECT   32   31   33   37                                                  
CONECT   33   32   34   36                                                  
CONECT   34   33   29   35                                                  
CONECT   35   34                                                            
CONECT   36   33                                                            
CONECT   37   32                                                            
CONECT   38   31   39                                                       
CONECT   39   38                                                            
CONECT   40   26                                                            
CONECT   41   20                                                            
CONECT   42   15                                                            
CONECT   43    2   44                                                       
CONECT   44   43   45   49                                                  
CONECT   45   44   46                                                       
CONECT   46   45   47   75                                                  
CONECT   47   46   48   52                                                  
CONECT   48   47   49   51                                                  
CONECT   49   48   44   50                                                  
CONECT   50   49                                                            
CONECT   51   48                                                            
CONECT   52   47   53                                                       
CONECT   53   52   54   58                                                  
CONECT   54   53   55   63                                                  
CONECT   55   54   56   62                                                  
CONECT   56   55   57   61                                                  
CONECT   57   56   58   59                                                  
CONECT   58   57   53                                                       
CONECT   59   57   60                                                       
CONECT   60   59                                                            
CONECT   61   56                                                            
CONECT   62   55                                                            
CONECT   63   54   64                                                       
CONECT   64   63   65   69                                                  
CONECT   65   64   66                                                       
CONECT   66   65   67   73                                                  
CONECT   67   66   68   72                                                  
CONECT   68   67   69   71                                                  
CONECT   69   68   64   70                                                  
CONECT   70   69                                                            
CONECT   71   68                                                            
CONECT   72   67                                                            
CONECT   73   66   74                                                       
CONECT   74   73                                                            
CONECT   75   46   76                                                       
CONECT   76   75                                                            
MASTER        0    0    0    0    0    0    0    0   76    0  168    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₅₁H₈₂O₂₅

Average Mass

1095.1920 Da

Monoisotopic Mass

1094.51452 Da

IUPAC Name

Traditional Name

CAS Registry Number

Not Available

SMILES

C[C@@H](CC[C@@]1(O)O[C@H]2C[C@H]3[C@@H]4CC=C5C[C@H](CC[C@]5(C)[C@H]4CC(=O)[C@]3(C)[C@H]2[C@@H]1C)O[C@@H]1O[C@H](CO)[C@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@H]1O)CO[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O

InChI Identifier

InChI=1S/C51H82O25/c1-19(18-68-45-40(64)36(60)33(57)27(14-52)70-45)7-10-51(67)20(2)32-26(76-51)12-25-23-6-5-21-11-22(8-9-49(21,3)24(23)13-31(56)50(25,32)4)69-46-42(66)39(63)43(30(17-55)73-46)74-48-44(38(62)35(59)29(16-54)72-48)75-47-41(65)37(61)34(58)28(15-53)71-47/h5,19-20,22-30,32-48,52-55,57-67H,6-18H2,1-4H3/t19-,20-,22-,23+,24-,25-,26-,27+,28+,29+,30+,32-,33+,34+,35+,36-,37-,38-,39-,40+,41+,42+,43-,44+,45+,46+,47-,48-,49-,50+,51+/m0/s1

InChI Key

UOYJKVXIKOXLKU-HMKCXMMYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Polygonatum kingianum	LOTUS Database	35616633
Polygonatum kingianum COLL.et HEMSL.	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as steroidal saponins. These are saponins in which the aglycone moiety is a steroid. The steroidal aglycone is usually a spirostane, furostane, spirosolane, solanidane, or curcubitacin derivative.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Steroidal glycosides

Direct Parent

Steroidal saponins

Alternative Parents

Substituents

Steroidal saponin
Furostane-skeleton
Diterpene glycoside
Oligosaccharide
22-hydroxysteroid
Diterpenoid
Oxosteroid
12-oxosteroid
Hydroxysteroid
Terpene glycoside
Delta-5-steroid
Fatty acyl glycoside
Alkyl glycoside
O-glycosyl compound
Glycosyl compound
Fatty acyl
Oxane
Tetrahydrofuran
Secondary alcohol
Ketone
Hemiacetal
Oxacycle
Organoheterocyclic compound
Polyol
Acetal
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-1	ALOGPS
logP	-4	ChemAxon
logS	-2.6	ALOGPS
pKa (Strongest Acidic)	11.5	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	25	ChemAxon
Hydrogen Donor Count	15	ChemAxon
Polar Surface Area	403.59 Å²	ChemAxon
Rotatable Bond Count	16	ChemAxon
Refractivity	254.12 m³·mol⁻¹	ChemAxon
Polarizability	113.42 Å³	ChemAxon
Number of Rings	9	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162918718

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for (25S)-Kingianoside E (NP0070668)

MOL for NP0070668 ((25S)-Kingianoside E)

3D MOL for NP0070668 ((25S)-Kingianoside E)

3D SDF for NP0070668 ((25S)-Kingianoside E)

3D-SDF for NP0070668 ((25S)-Kingianoside E)

PDB for NP0070668 ((25S)-Kingianoside E)

3D PDB for NP0070668 ((25S)-Kingianoside E)

SMILES for NP0070668 ((25S)-Kingianoside E)

INCHI for NP0070668 ((25S)-Kingianoside E)

Structure for NP0070668 ((25S)-Kingianoside E)

3D Structure for NP0070668 ((25S)-Kingianoside E)