NP-MRD: Showing NP-Card for Thalicthuberine (NP0070508)

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Record Information

Version

2.0

Created at

2022-04-28 15:54:08 UTC

Updated at

2022-04-28 15:54:08 UTC

NP-MRD ID

NP0070508

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Thalicthuberine

Description

Thalicthuberine belongs to the class of organic compounds known as 6,6a-secoaporphines. These are alkaloids with a structure that contains an aminoethylphenanthrene moiety. Thalicthuberine is found in Ocotea insularis, Platycapnos spicata, Platycapnos tenuiloba, Thalictrum delavayi, Thalictrum thunbergii and Thalictrum simplex. Thalicthuberine is a very strong basic compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004171523352D          

 26 29  0  0  0  0            999 V2000
    2.8291   -3.0076    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2973   -2.3768    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5776   -1.6009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0458   -0.9702    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3261   -0.1943    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7942    0.4364    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9821    0.2912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4503    0.9219    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3618    0.7767    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7306    1.6978    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1382   -0.0491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4185    0.7268    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2306    0.8721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7624    0.2414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5745    0.3866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1064   -0.2441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9309   -0.2709    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1602   -1.0634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4774   -1.5264    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8261   -1.0201    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0139   -1.1653    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4821   -0.5346    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6700   -0.6798    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3897   -1.4557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9215   -2.0864    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6412   -2.8623    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 10  1  0  0  0  0
  5 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 16 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 14 22  1  0  0  0  0
 22 23  1  0  0  0  0
 11 23  1  0  0  0  0
 23 24  2  0  0  0  0
  3 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
M  END

     RDKit          3D

 49 52  0  0  0  0  0  0  0  0999 V2000
   -0.5986   -4.1638    2.0036 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4943   -3.3726    1.5789 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2643   -2.2184    0.8791 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0086   -1.8340    0.5949 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3005   -0.6970   -0.0990 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7191   -0.3460   -0.3168 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1261    0.6735    0.6915 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5194    1.0715    0.5664 N   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4023   -0.0272    0.9432 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8103    1.5051   -0.7957 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2740    0.0856   -0.5311 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5927    1.2161   -1.2425 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4089    2.0231   -1.7132 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7221    1.6798   -1.4637 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6793    2.4916   -1.9897 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9883    2.1783   -1.8119 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3512    1.0532   -1.1107 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3834    0.2057   -0.5609 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0674    0.5405   -0.7456 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0661   -0.2826   -0.2563 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3378   -1.4125    0.4423 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5913   -1.8512    0.7814 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1001   -1.5651    2.1171 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7568    1.0423   -1.1280 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1959    2.3983   -1.3386 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1589    2.8262   -2.2364 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3045   -3.5382    2.6021 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1818   -4.9900    2.6160 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1135   -4.6047    1.1254 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8567   -2.4483    0.9254 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9509   -0.0548   -1.3600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3719   -1.2501   -0.1333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4980    1.5758    0.7281 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0696    0.1599    1.6965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8218   -0.9042    1.2935 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0247    0.3112    1.7962 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0168   -0.3876    0.0779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9771    0.6206   -1.4509 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7035    2.1606   -0.7304 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9736    2.1385   -1.1574 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6230    1.4691   -1.4430 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1650    2.9165   -2.2731 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4092    3.3884   -2.5504 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7620   -0.6460   -0.0890 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1662   -1.8372    2.0746 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5927   -2.1622    2.8606 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9017   -0.4828    2.2432 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0856    2.8816   -0.3377 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1910    2.4633   -1.7726 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  8 10  1  0
  5 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 24  1  0
 24 25  1  0
 25 26  1  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  1  0
 21  3  1  0
 20 11  1  0
 19 14  1  0
 26 16  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  4 30  1  0
  6 31  1  0
  6 32  1  0
  7 33  1  0
  7 34  1  0
  9 35  1  0
  9 36  1  0
  9 37  1  0
 10 38  1  0
 10 39  1  0
 10 40  1  0
 12 41  1  0
 13 42  1  0
 15 43  1  0
 25 48  1  0
 25 49  1  0
 18 44  1  0
 23 45  1  0
 23 46  1  0
 23 47  1  0
M  END


  Mrv1533004171523352D          

 26 29  0  0  0  0            999 V2000
    2.8291   -3.0076    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2973   -2.3768    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5776   -1.6009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0458   -0.9702    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3261   -0.1943    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7942    0.4364    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9821    0.2912    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4503    0.9219    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3618    0.7767    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7306    1.6978    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1382   -0.0491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4185    0.7268    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2306    0.8721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7624    0.2414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5745    0.3866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1064   -0.2441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9309   -0.2709    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1602   -1.0634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4774   -1.5264    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8261   -1.0201    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0139   -1.1653    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4821   -0.5346    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6700   -0.6798    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3897   -1.4557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9215   -2.0864    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6412   -2.8623    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 10  1  0  0  0  0
  5 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 16 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 14 22  1  0  0  0  0
 22 23  1  0  0  0  0
 11 23  1  0  0  0  0
 23 24  2  0  0  0  0
  3 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0070508

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC(CCN(C)C)=C2C=CC3=CC4=C(OCO4)C=C3C2=C1OC

> <INCHI_IDENTIFIER>
InChI=1S/C21H23NO4/c1-22(2)8-7-14-10-19(23-3)21(24-4)20-15(14)6-5-13-9-17-18(11-16(13)20)26-12-25-17/h5-6,9-11H,7-8,12H2,1-4H3

> <INCHI_KEY>
DDCILWXYWBKXKC-UHFFFAOYSA-N

> <FORMULA>
C21H23NO4

> <MOLECULAR_WEIGHT>
353.418

> <EXACT_MASS>
353.162708225

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
49

> <JCHEM_AVERAGE_POLARIZABILITY>
39.53548951603608

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2-{3,4-dimethoxy-13,15-dioxatetracyclo[8.7.0.0²,⁷.0¹²,¹⁶]heptadeca-1(17),2,4,6,8,10,12(16)-heptaen-6-yl}ethyl)dimethylamine

> <ALOGPS_LOGP>
3.19

> <JCHEM_LOGP>
3.4901482376666664

> <ALOGPS_LOGS>
-4.70

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_BASIC>
9.316464462805234

> <JCHEM_POLAR_SURFACE_AREA>
40.160000000000004

> <JCHEM_REFRACTIVITY>
100.9494

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.12e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2-{3,4-dimethoxy-13,15-dioxatetracyclo[8.7.0.0²,⁷.0¹²,¹⁶]heptadeca-1(17),2,4,6,8,10,12(16)-heptaen-6-yl}ethyl)dimethylamine

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 17-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   17-APR-15         0                                  
HETATM    1  C   UNK     0       5.281  -5.614   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       4.288  -4.437   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       4.811  -2.988   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.819  -1.811   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.342  -0.363   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.349   0.815   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.833   0.544   0.000  0.00  0.00           C+0
HETATM    8  N   UNK     0       0.841   1.721   0.000  0.00  0.00           N+0
HETATM    9  C   UNK     0      -0.675   1.450   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.364   3.169   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.858  -0.092   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.381   1.357   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       7.897   1.628   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       8.890   0.451   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.406   0.722   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      11.399  -0.456   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      12.938  -0.506   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      13.366  -1.985   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      12.091  -2.849   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      10.875  -1.904   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       9.359  -2.175   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.367  -0.998   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       6.851  -1.269   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.327  -2.717   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       7.320  -3.895   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       6.797  -5.343   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   24                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   11                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8                                                            
CONECT   11    5   12   23                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   22                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17   20                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   16   21                                                  
CONECT   21   20   22                                                       
CONECT   22   21   14   23                                                  
CONECT   23   22   11   24                                                  
CONECT   24   23    3   25                                                  
CONECT   25   24   26                                                       
CONECT   26   25                                                            
MASTER        0    0    0    0    0    0    0    0   26    0   58    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₁H₂₃NO₄

Average Mass

353.4180 Da

Monoisotopic Mass

353.16271 Da

IUPAC Name

(2-{3,4-dimethoxy-13,15-dioxatetracyclo[8.7.0.0²,⁷.0¹²,¹⁶]heptadeca-1(17),2,4,6,8,10,12(16)-heptaen-6-yl}ethyl)dimethylamine

Traditional Name

(2-{3,4-dimethoxy-13,15-dioxatetracyclo[8.7.0.0²,⁷.0¹²,¹⁶]heptadeca-1(17),2,4,6,8,10,12(16)-heptaen-6-yl}ethyl)dimethylamine

CAS Registry Number

Not Available

SMILES

COC1=CC(CCN(C)C)=C2C=CC3=CC4=C(OCO4)C=C3C2=C1OC

InChI Identifier

InChI=1S/C21H23NO4/c1-22(2)8-7-14-10-19(23-3)21(24-4)20-15(14)6-5-13-9-17-18(11-16(13)20)26-12-25-17/h5-6,9-11H,7-8,12H2,1-4H3

InChI Key

DDCILWXYWBKXKC-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Ocotea insularis	Plant	KNApSAcK
Platycapnos spicata	Plant	KNApSAcK
Platycapnos tenuiloba	Plant	KNApSAcK
Thalictrum delavayi	Plant	KNApSAcK
Thalictrum minus var. hypoleucum	Plant	KNApSAcK
Thalictrum simplex	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 6,6a-secoaporphines. These are alkaloids with a structure that contains an aminoethylphenanthrene moiety.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

6,6a-secoaporphines

Sub Class

Not Available

Direct Parent

6,6a-secoaporphines

Alternative Parents

Substituents

6,6a-secoaporphine
Phenanthrene
Naphthalene
Benzodioxole
Phenethylamine
Anisole
Aralkylamine
Alkyl aryl ether
Benzenoid
Tertiary aliphatic amine
Tertiary amine
Organoheterocyclic compound
Oxacycle
Acetal
Ether
Hydrocarbon derivative
Organic nitrogen compound
Organonitrogen compound
Organooxygen compound
Organic oxygen compound
Amine
Organopnictogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.19	ALOGPS
logP	3.49	ChemAxon
logS	-4.7	ALOGPS
pKa (Strongest Basic)	9.32	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	40.16 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	100.95 m³·mol⁻¹	ChemAxon
Polarizability	39.54 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11245138

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Thalicthuberine (NP0070508)

MOL for NP0070508 (Thalicthuberine)

3D MOL for NP0070508 (Thalicthuberine)

3D SDF for NP0070508 (Thalicthuberine)

3D-SDF for NP0070508 (Thalicthuberine)

PDB for NP0070508 (Thalicthuberine)

3D PDB for NP0070508 (Thalicthuberine)

SMILES for NP0070508 (Thalicthuberine)

INCHI for NP0070508 (Thalicthuberine)

Structure for NP0070508 (Thalicthuberine)

3D Structure for NP0070508 (Thalicthuberine)