NP-MRD: Showing NP-Card for Glycozolone A (NP0069912)

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Record Information

Version

2.0

Created at

2022-04-28 15:13:01 UTC

Updated at

2022-04-28 15:13:01 UTC

NP-MRD ID

NP0069912

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Glycozolone A

Description

(2R)-2-benzyl-1-methyl-1,2-dihydroquinazolin-4-ol belongs to the class of organic compounds known as quinazolines. Quinazolines are compounds containing a quinazoline moiety, which is made up of two fused six-member aromatic rings, a benzene ring and a pyrimidine ring. Glycozolone A is found in Glycosmis cochinchinensis. Based on a literature review very few articles have been published on (2R)-2-benzyl-1-methyl-1,2-dihydroquinazolin-4-ol.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 35 37  0  0  0  0  0  0  0  0999 V2000
   -1.2349   -2.2557    0.5826 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2315   -0.8587    0.4109 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3904   -0.0539    0.3199 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5881   -0.5778    0.7072 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7752    0.1592    0.6458 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7627    1.4589    0.1829 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5488    1.9868   -0.2084 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3617    1.2455   -0.1453 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0934    1.7978   -0.5524 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0546    2.9704   -0.9754 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0703    0.9653   -0.4501 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0996   -0.2247    0.3191 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1234   -1.1725   -0.1891 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4410   -0.5385   -0.2820 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2899   -0.4930    0.8292 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5399    0.0679    0.8040 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0061    0.6216   -0.3636 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2014    0.6020   -1.4967 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9479    0.0312   -1.4444 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1214   -2.8231    0.6852 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5776   -2.4950    1.4720 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6688   -2.7007   -0.2919 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6385   -1.5695    1.0691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7283   -0.2853    0.9637 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6728    2.0427    0.1290 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4562    2.9896   -0.5795 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9062    1.2700   -0.9614 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3048    0.0683    1.3907 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1256   -2.0934    0.4326 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8222   -1.4430   -1.2437 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9590   -0.9178    1.7647 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1656    0.0824    1.6869 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9838    1.0772   -0.4397 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5767    1.0422   -2.4184 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3414    0.0237   -2.3536 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  2  0
 12 11  1  0
 11  9  1  0
  9 10  2  0
  9  8  1  0
  8  7  2  0
  7  6  1  0
  6  5  2  0
  5  4  1  0
  4  3  2  0
  3  2  1  0
 19 14  1  0
  3  8  1  0
  1 20  1  0
  1 21  1  0
  1 22  1  0
 12 28  1  1
 13 29  1  0
 13 30  1  0
 15 31  1  0
 16 32  1  0
 17 33  1  0
 18 34  1  0
 19 35  1  0
 11 27  1  0
  7 26  1  0
  6 25  1  0
  5 24  1  0
  4 23  1  0
M  END


  Mrv1652304282217132D          

 19 21  0  0  1  0            999 V2000
   -0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  4 10  1  0  0  0  0
 10 11  2  0  0  0  0
  8 12  1  1  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 13 18  1  0  0  0  0
  7 19  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0069912

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CN1[C@@H](CC2=CC=CC=C2)NC(=O)C2=CC=CC=C12

> <INCHI_IDENTIFIER>
InChI=1S/C16H16N2O/c1-18-14-10-6-5-9-13(14)16(19)17-15(18)11-12-7-3-2-4-8-12/h2-10,15H,11H2,1H3,(H,17,19)/t15-/m0/s1

> <INCHI_KEY>
KRKWVLLKCHDMKS-HNNXBMFYSA-N

> <FORMULA>
C16H16N2O

> <MOLECULAR_WEIGHT>
252.317

> <EXACT_MASS>
252.126263143

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
35

> <JCHEM_AVERAGE_POLARIZABILITY>
27.839739570967723

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2S)-2-benzyl-1-methyl-1,2,3,4-tetrahydroquinazolin-4-one

> <ALOGPS_LOGP>
2.63

> <JCHEM_LOGP>
3.0943920180000006

> <ALOGPS_LOGS>
-3.54

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.959966196905082

> <JCHEM_PKA_STRONGEST_BASIC>
-0.7055210858129656

> <JCHEM_POLAR_SURFACE_AREA>
32.34

> <JCHEM_REFRACTIVITY>
76.70830000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.30e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S)-2-benzyl-1-methyl-2,3-dihydroquinazolin-4-one

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0      -1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.000  -3.080   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.000  -0.000   0.000  0.00  0.00           C+0
HETATM    7  N   UNK     0       2.667  -0.000   0.000  0.00  0.00           N+0
HETATM    8  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM    9  N   UNK     0       4.001  -2.310   0.000  0.00  0.00           N+0
HETATM   10  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       2.667  -4.620   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       5.335  -0.000   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       8.002  -0.000   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       9.336  -0.770   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       9.336  -2.310   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       8.002  -3.080   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
CONECT    1    2    6                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5   10                                                  
CONECT    5    4    6    7                                                  
CONECT    6    5    1                                                       
CONECT    7    5    8   19                                                  
CONECT    8    7    9   12                                                  
CONECT    9    8   10                                                       
CONECT   10    9    4   11                                                  
CONECT   11   10                                                            
CONECT   12    8   13                                                       
CONECT   13   12   14   18                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   13                                                       
CONECT   19    7                                                            
MASTER        0    0    0    0    0    0    0    0   19    0   42    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₆H₁₆N₂O

Average Mass

252.3170 Da

Monoisotopic Mass

252.12626 Da

IUPAC Name

(2S)-2-benzyl-1-methyl-1,2,3,4-tetrahydroquinazolin-4-one

Traditional Name

(2S)-2-benzyl-1-methyl-2,3-dihydroquinazolin-4-one

CAS Registry Number

Not Available

SMILES

CN1[C@@H](CC2=CC=CC=C2)NC(=O)C2=CC=CC=C12

InChI Identifier

InChI=1S/C16H16N2O/c1-18-14-10-6-5-9-13(14)16(19)17-15(18)11-12-7-3-2-4-8-12/h2-10,15H,11H2,1H3,(H,17,19)/t15-/m0/s1

InChI Key

KRKWVLLKCHDMKS-HNNXBMFYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Glycosmis cochinchinensis	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as quinazolines. Quinazolines are compounds containing a quinazoline moiety, which is made up of two fused six-member aromatic rings, a benzene ring and a pyrimidine ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Diazanaphthalenes

Sub Class

Benzodiazines

Direct Parent

Quinazolines

Alternative Parents

Substituents

Quinazoline
Dialkylarylamine
Benzenoid
Monocyclic benzene moiety
Cyclic carboximidic acid
Azacycle
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.63	ALOGPS
logP	3.09	ChemAxon
logS	-3.5	ALOGPS
pKa (Strongest Acidic)	14.96	ChemAxon
pKa (Strongest Basic)	-0.71	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	32.34 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	76.71 m³·mol⁻¹	ChemAxon
Polarizability	27.84 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163023891

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Glycozolone A (NP0069912)

MOL for NP0069912 (Glycozolone A)

3D MOL for NP0069912 (Glycozolone A)

3D SDF for NP0069912 (Glycozolone A)

3D-SDF for NP0069912 (Glycozolone A)

PDB for NP0069912 (Glycozolone A)

3D PDB for NP0069912 (Glycozolone A)

SMILES for NP0069912 (Glycozolone A)

INCHI for NP0069912 (Glycozolone A)

Structure for NP0069912 (Glycozolone A)

3D Structure for NP0069912 (Glycozolone A)