Np mrd loader

Record Information
Version2.0
Created at2022-04-28 15:12:26 UTC
Updated at2022-04-28 15:12:26 UTC
NP-MRD IDNP0069899
Secondary Accession NumbersNone
Natural Product Identification
Common NameGeometricin A
Description(2Z,6E,8E,10S,11R,12R,13S,15S)-11,13-dihydroxy-15-[(2R,3R,5R,7S,8S,9S)-9-hydroxy-4,4,8-trimethyl-7-[(2E)-3-(2-methyl-1,3-oxazol-4-yl)prop-2-en-1-yl]-3-(phosphonooxy)-1,6-dioxaspiro[4.5]Decan-2-yl]-15-methoxy-3,7,8,10,12-pentamethylpentadeca-2,6,8-trienimidic acid belongs to the class of organic compounds known as aromatic monoterpenoids. These are monoterpenoids containing at least one aromatic ring. Geometricin A is found in Luffariella geometrica. Based on a literature review very few articles have been published on (2Z,6E,8E,10S,11R,12R,13S,15S)-11,13-dihydroxy-15-[(2R,3R,5R,7S,8S,9S)-9-hydroxy-4,4,8-trimethyl-7-[(2E)-3-(2-methyl-1,3-oxazol-4-yl)prop-2-en-1-yl]-3-(phosphonooxy)-1,6-dioxaspiro[4.5]Decan-2-yl]-15-methoxy-3,7,8,10,12-pentamethylpentadeca-2,6,8-trienimidic acid.
Structure
Thumb
Synonyms
ValueSource
(2Z,6E,8E,10S,11R,12R,13S,15S)-11,13-Dihydroxy-15-[(2R,3R,5R,7S,8S,9S)-9-hydroxy-4,4,8-trimethyl-7-[(2E)-3-(2-methyl-1,3-oxazol-4-yl)prop-2-en-1-yl]-3-(phosphonooxy)-1,6-dioxaspiro[4.5]decan-2-yl]-15-methoxy-3,7,8,10,12-pentamethylpentadeca-2,6,8-trienimidateGenerator
Chemical FormulaC39H63N2O12P
Average Mass782.9090 Da
Monoisotopic Mass782.41186 Da
IUPAC Name{[(2R,3R,5R,7S,8S,9S)-2-[(1S,3S,4R,5R,6S,7E,9E,13Z)-14-carbamoyl-3,5-dihydroxy-1-methoxy-4,6,8,9,13-pentamethyltetradeca-7,9,13-trien-1-yl]-9-hydroxy-4,4,8-trimethyl-7-[(2E)-3-(2-methyl-1,3-oxazol-4-yl)prop-2-en-1-yl]-1,6-dioxaspiro[4.5]decan-3-yl]oxy}phosphonic acid
Traditional Name[(2R,3R,5R,7S,8S,9S)-2-[(1S,3S,4R,5R,6S,7E,9E,13Z)-14-carbamoyl-3,5-dihydroxy-1-methoxy-4,6,8,9,13-pentamethyltetradeca-7,9,13-trien-1-yl]-9-hydroxy-4,4,8-trimethyl-7-[(2E)-3-(2-methyl-1,3-oxazol-4-yl)prop-2-en-1-yl]-1,6-dioxaspiro[4.5]decan-3-yl]oxyphosphonic acid
CAS Registry NumberNot Available
SMILES
CO[C@@H](C[C@H](O)[C@@H](C)[C@H](O)[C@@H](C)\C=C(/C)\C(\C)=C\CC\C(C)=C/C(N)=O)[C@H]1O[C@]2(C[C@H](O)[C@H](C)[C@H](C\C=C\C3=COC(C)=N3)O2)C(C)(C)[C@H]1OP(O)(O)=O
InChI Identifier
InChI=1S/C39H63N2O12P/c1-22(17-34(40)44)13-11-14-23(2)24(3)18-25(4)35(45)27(6)30(42)19-33(49-10)36-37(53-54(46,47)48)38(8,9)39(52-36)20-31(43)26(5)32(51-39)16-12-15-29-21-50-28(7)41-29/h12,14-15,17-18,21,25-27,30-33,35-37,42-43,45H,11,13,16,19-20H2,1-10H3,(H2,40,44)(H2,46,47,48)/b15-12+,22-17-,23-14+,24-18+/t25-,26-,27+,30-,31-,32-,33-,35+,36+,37-,39+/m0/s1
InChI KeyGNMWTNFLWQSTKW-QYGNYFKXSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Luffariella geometrica-
Chemical Taxonomy
Description Belongs to the class of organic compounds known as aromatic monoterpenoids. These are monoterpenoids containing at least one aromatic ring.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassMonoterpenoids
Direct ParentAromatic monoterpenoids
Alternative Parents
Substituents
  • Aromatic monoterpenoid
  • Ketal
  • Monoalkyl phosphate
  • 2,4-disubstituted 1,3-oxazole
  • Alkyl phosphate
  • Phosphoric acid ester
  • Oxane
  • Organic phosphoric acid derivative
  • Monosaccharide
  • Heteroaromatic compound
  • Tetrahydrofuran
  • Oxazole
  • Azole
  • Secondary alcohol
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Ether
  • Dialkyl ether
  • Carboximidic acid derivative
  • Carboximidic acid
  • Acetal
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.11ALOGPS
logP3.41ChemAxon
logS-4.4ALOGPS
pKa (Strongest Acidic)1.28ChemAxon
pKa (Strongest Basic)0.59ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count11ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area224.26 ŲChemAxon
Rotatable Bond Count18ChemAxon
Refractivity205.85 m³·mol⁻¹ChemAxon
Polarizability84.12 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound163025527
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General ReferencesNot Available