NP-MRD: Showing NP-Card for Dielsine (NP0069820)

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Record Information

Version

2.0

Created at

2022-04-28 15:09:04 UTC

Updated at

2022-04-28 15:09:04 UTC

NP-MRD ID

NP0069820

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Dielsine

Description

Dielsine is found in Daphnandra dielsii, Guatteria blepharophylla and Guatteria dielsiana. Based on a literature review very few articles have been published on (3S,14S,22R)-27-hydroxy-16,26-dimethoxy-4,21-dimethyl-12,29,37-trioxa-4,21-diazaoctacyclo[28.2.2.1⁷,¹¹.1¹⁰,¹⁴.1¹⁴,¹⁸.1²⁴,²⁸.0³,⁸.0²²,³⁶]Octatriaconta-1(32),7(38),8,10,16,18(36),24,26,28(35),30,33-undecaen-15-one.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282217092D          

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M  END

     RDKit          3D

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M  END


  Mrv1652304282217092D          

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    9.5684    0.1820    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7847    0.3315    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3472   -0.3209    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5403   -0.1492    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.4964   -1.1822    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.8765   -0.6499    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1233   -0.7373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6966   -1.4142    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8756   -1.1370    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6242   -0.3025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2381    0.2766    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0143    0.0617    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1850    1.1315    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.3835    1.3839    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.7277    0.8665    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8548    0.0409    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2346    2.1954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8236    1.7537    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5912    2.2027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0214    1.4958    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8510    1.4655    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3478    2.1299    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1536    1.7912    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.9301    2.8618    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0870    2.8985    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2505   -2.0857    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.1009   -1.9692    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4666    1.0927    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6483    1.1979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9555    2.1335    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.0317    0.8928    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.5750    0.2720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
  8 13  1  1  0  0  0
 13 14  1  0  0  0  0
 10 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17 19  1  0  0  0  0
  9 19  1  0  0  0  0
 19 20  1  1  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 21 26  1  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  1  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 24 30  1  0  0  0  0
 28 31  1  0  0  0  0
 27 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  2  0  0  0  0
 34 35  1  0  0  0  0
 35 36  2  0  0  0  0
 36 37  1  0  0  0  0
  4 37  1  0  0  0  0
 36 38  1  0  0  0  0
 38 39  2  0  0  0  0
 33 39  1  0  0  0  0
 22 40  1  0  0  0  0
 40 41  1  0  0  0  0
 19 41  1  0  0  0  0
 16 42  1  0  0  0  0
 42 43  1  0  0  0  0
  3 44  1  0  0  0  0
  2 45  1  0  0  0  0
 45 46  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0069820

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC2=CC(OC3=CC=C(C[C@@H]4N(C)CCC5=CC6=C(O[C@@]7(CO6)C(=O)C(OC)=CC6=C7[C@@H](C2)N(C)CC6)C=C45)C=C3)=C1O

> <INCHI_IDENTIFIER>
InChI=1S/C37H38N2O7/c1-38-11-9-23-17-29-30-19-26(23)27(38)13-21-5-7-25(8-6-21)45-32-16-22(15-31(42-3)35(32)40)14-28-34-24(10-12-39(28)2)18-33(43-4)36(41)37(34,46-30)20-44-29/h5-8,15-19,27-28,40H,9-14,20H2,1-4H3/t27-,28+,37+/m0/s1

> <INCHI_KEY>
UVAQBWNRDSCARL-DFSMTXOASA-N

> <FORMULA>
C37H38N2O7

> <MOLECULAR_WEIGHT>
622.718

> <EXACT_MASS>
622.267901572

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
84

> <JCHEM_AVERAGE_POLARIZABILITY>
66.90536013161287

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3S,14S,22R)-27-hydroxy-16,26-dimethoxy-4,21-dimethyl-12,29,37-trioxa-4,21-diazaoctacyclo[28.2.2.1^{7,11}.1^{10,14}.1^{14,18}.1^{24,28}.0^{3,8}.0^{22,36}]octatriaconta-1(32),7(38),8,10,16,18(36),24(35),25,27,30,33-undecaen-15-one

> <ALOGPS_LOGP>
4.07

> <JCHEM_LOGP>
4.513482422944053

> <ALOGPS_LOGS>
-4.45

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
8

> <JCHEM_PHYSIOLOGICAL_CHARGE>
2

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.32149451787988

> <JCHEM_PKA_STRONGEST_BASIC>
7.816082582242042

> <JCHEM_POLAR_SURFACE_AREA>
89.93000000000002

> <JCHEM_REFRACTIVITY>
176.12159999999992

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.23e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3S,14S,22R)-27-hydroxy-16,26-dimethoxy-4,21-dimethyl-12,29,37-trioxa-4,21-diazaoctacyclo[28.2.2.1^{7,11}.1^{10,14}.1^{14,18}.1^{24,28}.0^{3,8}.0^{22,36}]octatriaconta-1(32),7(38),8,10,16,18(36),24(35),25,27,30,33-undecaen-15-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0      22.309  -0.105   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      22.815   1.368   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      21.785   2.537   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      20.231   2.314   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      19.865   0.789   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      20.777  -0.562   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      19.659  -2.138   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      18.624  -3.563   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      17.507  -2.420   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      18.323  -1.119   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      19.829  -1.040   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      20.853  -2.349   0.000  0.00  0.00           C+0
HETATM   13  N   UNK     0      20.148  -3.732   0.000  0.00  0.00           N+0
HETATM   14  C   UNK     0      20.878  -5.088   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      17.861   0.340   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      16.398   0.619   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      15.581  -0.599   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      14.075  -0.279   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0      15.860  -2.207   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      14.703  -1.213   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      13.297  -1.376   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      12.500  -2.640   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      10.968  -2.122   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      10.498  -0.565   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      11.645   0.516   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      13.093   0.115   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      11.545   2.112   0.000  0.00  0.00           C+0
HETATM   28  N   UNK     0      10.049   2.583   0.000  0.00  0.00           N+0
HETATM   29  C   UNK     0       8.825   1.617   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       9.062   0.076   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       9.771   4.098   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      12.737   3.273   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      14.170   4.112   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      14.973   2.792   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      16.522   2.736   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      17.449   3.976   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0      18.953   3.344   0.000  0.00  0.00           O+0
HETATM   38  C   UNK     0      16.669   5.342   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      15.096   5.411   0.000  0.00  0.00           C+0
HETATM   40  O   UNK     0      13.534  -3.893   0.000  0.00  0.00           O+0
HETATM   41  C   UNK     0      15.122  -3.676   0.000  0.00  0.00           C+0
HETATM   42  O   UNK     0      15.804   2.040   0.000  0.00  0.00           O+0
HETATM   43  C   UNK     0      14.277   2.236   0.000  0.00  0.00           C+0
HETATM   44  O   UNK     0      22.317   3.983   0.000  0.00  0.00           O+0
HETATM   45  O   UNK     0      24.326   1.666   0.000  0.00  0.00           O+0
HETATM   46  C   UNK     0      25.340   0.508   0.000  0.00  0.00           C+0
CONECT    1    2    6                                                       
CONECT    2    1    3   45                                                  
CONECT    3    2    4   44                                                  
CONECT    4    3    5   37                                                  
CONECT    5    4    6                                                       
CONECT    6    5    1    7                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   13                                                  
CONECT    9    8   10   19                                                  
CONECT   10    9   11   15                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12    8   14                                                  
CONECT   14   13                                                            
CONECT   15   10   16                                                       
CONECT   16   15   17   42                                                  
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17    9   20   41                                             
CONECT   20   19   21                                                       
CONECT   21   20   22   26                                                  
CONECT   22   21   23   40                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   30                                                  
CONECT   25   24   26   27                                                  
CONECT   26   25   21                                                       
CONECT   27   25   28   32                                                  
CONECT   28   27   29   31                                                  
CONECT   29   28   30                                                       
CONECT   30   29   24                                                       
CONECT   31   28                                                            
CONECT   32   27   33                                                       
CONECT   33   32   34   39                                                  
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37   38                                                  
CONECT   37   36    4                                                       
CONECT   38   36   39                                                       
CONECT   39   38   33                                                       
CONECT   40   22   41                                                       
CONECT   41   40   19                                                       
CONECT   42   16   43                                                       
CONECT   43   42                                                            
CONECT   44    3                                                            
CONECT   45    2   46                                                       
CONECT   46   45                                                            
MASTER        0    0    0    0    0    0    0    0   46    0  106    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₇H₃₈N₂O₇

Average Mass

622.7180 Da

Monoisotopic Mass

622.26790 Da

IUPAC Name

(3S,14S,22R)-27-hydroxy-16,26-dimethoxy-4,21-dimethyl-12,29,37-trioxa-4,21-diazaoctacyclo[28.2.2.1^{7,11}.1^{10,14}.1^{14,18}.1^{24,28}.0^{3,8}.0^{22,36}]octatriaconta-1(32),7(38),8,10,16,18(36),24(35),25,27,30,33-undecaen-15-one

Traditional Name

CAS Registry Number

Not Available

SMILES

COC1=CC2=CC(OC3=CC=C(C[C@@H]4N(C)CCC5=CC6=C(O[C@@]7(CO6)C(=O)C(OC)=CC6=C7[C@@H](C2)N(C)CC6)C=C45)C=C3)=C1O

InChI Identifier

InChI=1S/C37H38N2O7/c1-38-11-9-23-17-29-30-19-26(23)27(38)13-21-5-7-25(8-6-21)45-32-16-22(15-31(42-3)35(32)40)14-28-34-24(10-12-39(28)2)18-33(43-4)36(41)37(34,46-30)20-44-29/h5-8,15-19,27-28,40H,9-14,20H2,1-4H3/t27-,28+,37+/m0/s1

InChI Key

UVAQBWNRDSCARL-DFSMTXOASA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Daphnandra dielsii	Plant	KNApSAcK
Guatteria blepharophylla	LOTUS Database	35616633
Guatteria dielsiana	Plant	KNApSAcK

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.07	ALOGPS
logP	4.51	ChemAxon
logS	-4.4	ALOGPS
pKa (Strongest Acidic)	9.32	ChemAxon
pKa (Strongest Basic)	7.82	ChemAxon
Physiological Charge	2	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	89.93 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	176.12 m³·mol⁻¹	ChemAxon
Polarizability	66.91 Å³	ChemAxon
Number of Rings	8	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162892163

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Dielsine (NP0069820)

MOL for NP0069820 (Dielsine)

3D MOL for NP0069820 (Dielsine)

3D SDF for NP0069820 (Dielsine)

3D-SDF for NP0069820 (Dielsine)

PDB for NP0069820 (Dielsine)

3D PDB for NP0069820 (Dielsine)

SMILES for NP0069820 (Dielsine)

INCHI for NP0069820 (Dielsine)

Structure for NP0069820 (Dielsine)

3D Structure for NP0069820 (Dielsine)