NP-MRD: Showing NP-Card for Turcomanine (NP0069275)

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Record Information

Version

2.0

Created at

2022-04-28 14:37:38 UTC

Updated at

2022-04-28 14:37:38 UTC

NP-MRD ID

NP0069275

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Turcomanine

Description

Papaveroline, 6-O-methyl- belongs to the class of organic compounds known as benzylisoquinolines. These are organic compounds containing an isoquinoline to which a benzyl group is attached. Turcomanine is found in Berberis turcomanica. Papaveroline, 6-O-methyl- is a very strong basic compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 37 39  0  0  0  0  0  0  0  0999 V2000
    6.2866   -0.7918    1.0122 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0308   -0.6053    0.7738 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7574   -0.5288    0.5881 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8896   -1.5578    1.0012 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5391   -1.5011    0.8165 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7600   -2.5478    1.2493 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6116   -2.4233    1.0288 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1323   -1.3386    0.4271 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3819   -0.3094   -0.0001 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8960    0.8860   -0.6560 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3507    0.9139   -0.8295 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0249    0.4320   -1.9326 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3842    0.4716   -2.0659 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1375    1.0226   -1.0458 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5357    1.0870   -1.1338 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4975    1.5113    0.0660 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2380    2.0725    1.1091 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1085    1.4626    0.1852 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9886   -0.4085    0.2075 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8239    0.6057   -0.2021 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1803    0.5848   -0.0346 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9913    1.6269   -0.4610 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9429   -0.7795    0.0853 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7767   -0.0558    1.7377 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4715   -1.7846    1.5442 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3365   -2.4122    1.4794 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2002   -3.3972    1.7242 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2185   -3.2574    1.3753 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5940    1.7692   -0.0348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4060    1.0833   -1.6537 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4538   -0.0025   -2.7405 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9144    0.0944   -2.9297 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9882    0.7201   -1.9643 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7774    2.4345    1.9294 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6794    1.8685    1.0919 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3649    1.4624   -0.6829 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9904    1.5923   -0.3279 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3 21  2  0
 21 22  1  0
 21 20  1  0
 20 19  2  0
 19  9  1  0
  9 10  1  0
 10 11  1  0
 11 18  2  0
 18 16  1  0
 16 17  1  0
 16 14  2  0
 14 15  1  0
 14 13  1  0
 13 12  2  0
  9  8  2  0
  8  7  1  0
  7  6  2  0
  6  5  1  0
  5  4  2  0
  4  3  1  0
  5 19  1  0
 12 11  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
 22 37  1  0
 20 36  1  0
 10 29  1  0
 10 30  1  0
 18 35  1  0
 17 34  1  0
 15 33  1  0
 13 32  1  0
 12 31  1  0
  7 28  1  0
  6 27  1  0
  4 26  1  0
M  END


  Mrv1652310091706582D          

 22 24  0  0  0  0            999 V2000
    5.0013   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -4.1250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  2  2  0  0  0  0
  5  4  2  0  0  0  0
 10  2  1  0  0  0  0
 10  6  1  0  0  0  0
 10  7  2  0  0  0  0
 11  4  1  0  0  0  0
 11  8  2  0  0  0  0
 12  9  2  0  0  0  0
 12 11  1  0  0  0  0
 13  6  1  0  0  0  0
 13 12  1  0  0  0  0
 14  3  1  0  0  0  0
 15  7  1  0  0  0  0
 15 14  2  0  0  0  0
 16  9  1  0  0  0  0
 17  8  1  0  0  0  0
 17 16  2  0  0  0  0
 18  5  1  0  0  0  0
 18 13  2  0  0  0  0
 19 14  1  0  0  0  0
 20 15  1  0  0  0  0
 21 16  1  0  0  0  0
 22  1  1  0  0  0  0
 22 17  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0069275

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=C(O)C=C2C(CC3=CC(O)=C(O)C=C3)=NC=CC2=C1

> <INCHI_IDENTIFIER>
InChI=1S/C17H15NO4/c1-22-17-8-11-4-5-18-13(12(11)9-16(17)21)6-10-2-3-14(19)15(20)7-10/h2-5,7-9,19-21H,6H2,1H3

> <INCHI_KEY>
JRVVRZZAHKIELX-UHFFFAOYSA-N

> <FORMULA>
C17H15NO4

> <MOLECULAR_WEIGHT>
297.31

> <EXACT_MASS>
297.100107967

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
37

> <JCHEM_AVERAGE_POLARIZABILITY>
30.546808888893594

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
4-[(7-hydroxy-6-methoxyisoquinolin-1-yl)methyl]benzene-1,2-diol

> <ALOGPS_LOGP>
2.51

> <JCHEM_LOGP>
2.642392903666666

> <ALOGPS_LOGS>
-3.41

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
9.569703376087608

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.95802272324951

> <JCHEM_PKA_STRONGEST_BASIC>
6.0362166811467075

> <JCHEM_POLAR_SURFACE_AREA>
82.81000000000002

> <JCHEM_REFRACTIVITY>
82.0706

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.16e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4-[(7-hydroxy-6-methoxyisoquinolin-1-yl)methyl]benzene-1,2-diol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-OCT-17   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-OCT-17         0                                  
HETATM    1  C   UNK     0       9.336  -0.770   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.001  -6.930   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.335  -7.700   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.667  -4.620   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.335  -4.620   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.001  -5.390   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.668  -6.930   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.668  -5.390   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   18  N   UNK     0       1.334  -2.310   0.000  0.00  0.00           N+0
HETATM   19  O   UNK     0       8.002  -7.700   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0       8.002  -4.620   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0       8.002  -3.080   0.000  0.00  0.00           O+0
HETATM   22  O   UNK     0       8.002  -0.000   0.000  0.00  0.00           O+0
CONECT    1   22                                                            
CONECT    2    3   10                                                       
CONECT    3    2   14                                                       
CONECT    4    5   11                                                       
CONECT    5    4   18                                                       
CONECT    6   10   13                                                       
CONECT    7   10   15                                                       
CONECT    8   11   17                                                       
CONECT    9   12   16                                                       
CONECT   10    2    6    7                                                  
CONECT   11    4    8   12                                                  
CONECT   12    9   11   13                                                  
CONECT   13    6   12   18                                                  
CONECT   14    3   15   19                                                  
CONECT   15    7   14   20                                                  
CONECT   16    9   17   21                                                  
CONECT   17    8   16   22                                                  
CONECT   18    5   13                                                       
CONECT   19   14                                                            
CONECT   20   15                                                            
CONECT   21   16                                                            
CONECT   22    1   17                                                       
MASTER        0    0    0    0    0    0    0    0   22    0   48    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₇H₁₅NO₄

Average Mass

297.3100 Da

Monoisotopic Mass

297.10011 Da

IUPAC Name

4-[(7-hydroxy-6-methoxyisoquinolin-1-yl)methyl]benzene-1,2-diol

Traditional Name

4-[(7-hydroxy-6-methoxyisoquinolin-1-yl)methyl]benzene-1,2-diol

CAS Registry Number

Not Available

SMILES

COC1=C(O)C=C2C(CC3=CC(O)=C(O)C=C3)=NC=CC2=C1

InChI Identifier

InChI=1S/C17H15NO4/c1-22-17-8-11-4-5-18-13(12(11)9-16(17)21)6-10-2-3-14(19)15(20)7-10/h2-5,7-9,19-21H,6H2,1H3

InChI Key

JRVVRZZAHKIELX-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Berberis turcomanica	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as benzylisoquinolines. These are organic compounds containing an isoquinoline to which a benzyl group is attached.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Isoquinolines and derivatives

Sub Class

Benzylisoquinolines

Direct Parent

Benzylisoquinolines

Alternative Parents

Substituents

Benzylisoquinoline
Anisole
Catechol
Alkyl aryl ether
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Phenol
Monocyclic benzene moiety
Pyridine
Benzenoid
Heteroaromatic compound
Ether
Azacycle
Organooxygen compound
Organonitrogen compound
Hydrocarbon derivative
Organopnictogen compound
Organic nitrogen compound
Organic oxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.51	ALOGPS
logP	2.64	ChemAxon
logS	-3.4	ALOGPS
pKa (Strongest Acidic)	8.96	ChemAxon
pKa (Strongest Basic)	6.04	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	82.81 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	82.07 m³·mol⁻¹	ChemAxon
Polarizability	30.55 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0168513

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

626630

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Turcomanine (NP0069275)

MOL for NP0069275 (Turcomanine)

3D MOL for NP0069275 (Turcomanine)

3D SDF for NP0069275 (Turcomanine)

3D-SDF for NP0069275 (Turcomanine)

PDB for NP0069275 (Turcomanine)

3D PDB for NP0069275 (Turcomanine)

SMILES for NP0069275 (Turcomanine)

INCHI for NP0069275 (Turcomanine)

Structure for NP0069275 (Turcomanine)

3D Structure for NP0069275 (Turcomanine)