NP-MRD: Showing NP-Card for 4,5-Dioxodehydroasimilobine (NP0069010)

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Record Information

Version

2.0

Created at

2022-04-28 14:16:58 UTC

Updated at

2022-04-28 14:16:58 UTC

NP-MRD ID

NP0069010

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4,5-Dioxodehydroasimilobine

Description

NORARISTOLODIONE belongs to the class of organic compounds known as 4,5-dioxoaporphines. These are alkaloids that contains the tetracyclic aporphine skeleton with two C=O groups at the 4- and 5-positions. 4,5-Dioxodehydroasimilobine is found in Aristolochia contorta , Aristolochia elegans , Aristolochia heterophylla Hemsl , Aristolochia indica, Aristolochia kaempferi, Aristolochia liukiuensis, Aristolochia mollissima, Aristolochia triangularis, Fissistigma glaucescens, Fissistigma oldhamii, Houttuynia cordata , Piper sarmentosum and Telitoxicum glaxiovii. NORARISTOLODIONE is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 33 36  0  0  0  0  0  0  0  0999 V2000
    0.4219    3.4911    0.6367 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2192    2.6660   -0.5612 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5515    1.5161   -0.3884 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9500    1.7117   -0.3870 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3983    3.0113   -0.5834 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7926    0.6538   -0.1989 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3018   -0.6236   -0.0070 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9380   -0.8398   -0.0077 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4749   -2.1175    0.1837 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8777   -2.3004    0.1731 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7687   -1.2754   -0.0210 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1300   -1.5650   -0.0595 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0274   -0.5521   -0.2969 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5738    0.7287   -0.4939 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2069    1.0357   -0.4587 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3139    0.0298   -0.2192 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0590    0.2645   -0.2071 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3267   -3.2254    0.3830 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7408   -3.0837    0.3975 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5465   -4.0209    0.5685 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2359   -1.7231    0.1930 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4604   -1.4698    0.1844 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5956    3.7923    0.9339 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8508    2.8158    1.3859 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0933    4.3129    0.3796 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3884    3.1848   -0.5880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8477    0.8077   -0.1989 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2885   -3.3051    0.3248 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4745   -2.5796    0.0965 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0996   -0.7361   -0.3338 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2403    1.5641   -0.6853 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9502    2.0256   -0.6719 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9287   -4.1945    0.5273 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3 17  2  0
 17 16  1  0
 16 15  2  0
 15 14  1  0
 14 13  2  0
 13 12  1  0
 12 11  2  0
 11 10  1  0
 10  9  2  0
  9 18  1  0
 18 19  1  0
 19 20  2  0
 19 21  1  0
 21 22  2  0
 21  7  1  0
  7  6  1  0
  6  4  2  0
  4  5  1  0
  7  8  2  0
  4  3  1  0
  8 17  1  0
 11 16  1  0
  8  9  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
 15 32  1  0
 14 31  1  0
 13 30  1  0
 12 29  1  0
 10 28  1  0
 18 33  1  0
  6 27  1  0
  5 26  1  0
M  END


  Mrv1533004191520482D          

 22 25  0  0  0  0            999 V2000
    4.2868   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  4  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 15 20  1  0  0  0  0
 20 21  1  0  0  0  0
  3 21  2  0  0  0  0
 21 22  1  0  0  0  0
  7 22  2  0  0  0  0
 13 22  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0069010

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=C2C3=CC=CC=C3C=C3NC(=O)C(=O)C(C=C1O)=C23

> <INCHI_IDENTIFIER>
InChI=1S/C17H11NO4/c1-22-16-12(19)7-10-13-11(18-17(21)15(10)20)6-8-4-2-3-5-9(8)14(13)16/h2-7,19H,1H3,(H,18,21)

> <INCHI_KEY>
FPIKZASYTJSPJN-UHFFFAOYSA-N

> <FORMULA>
C17H11NO4

> <MOLECULAR_WEIGHT>
293.278

> <EXACT_MASS>
293.068807838

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
33

> <JCHEM_AVERAGE_POLARIZABILITY>
29.24506769877113

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
15-hydroxy-16-methoxy-10-azatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadeca-1(16),2,4,6,8,13(17),14-heptaene-11,12-dione

> <ALOGPS_LOGP>
2.85

> <JCHEM_LOGP>
2.469260487333333

> <ALOGPS_LOGS>
-3.96

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
9.469979742564663

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.763776067986523

> <JCHEM_PKA_STRONGEST_BASIC>
-4.801223402044573

> <JCHEM_POLAR_SURFACE_AREA>
75.63

> <JCHEM_REFRACTIVITY>
81.81949999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.20e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
15-hydroxy-16-methoxy-10-azatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadeca-1(16),2,4,6,8,13(17),14-heptaene-11,12-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 19-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-APR-15         0                                  
HETATM    1  C   UNK     0       8.002  -4.620   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       6.668  -5.390   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       5.335  -4.620   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.001  -5.390   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       4.001  -6.930   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       2.667  -4.620   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       0.000  -3.080   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       0.000   0.000   0.000  0.00  0.00           O+0
HETATM   12  N   UNK     0       2.667  -0.000   0.000  0.00  0.00           N+0
HETATM   13  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       8.002  -0.000   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       9.336  -0.770   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       9.336  -2.310   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       8.002  -3.080   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   21                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7                                                       
CONECT    7    6    8   22                                                  
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13                                                       
CONECT   13   12   14   22                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   20                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   15   21                                                  
CONECT   21   20    3   22                                                  
CONECT   22   21    7   13                                                  
MASTER        0    0    0    0    0    0    0    0   22    0   50    0
END

View in JSmol

Synonyms

Value	Source
45-dioxodehydro Asimilobine	ChEMBL

Chemical Formula

C₁₇H₁₁NO₄

Average Mass

293.2780 Da

Monoisotopic Mass

293.06881 Da

IUPAC Name

15-hydroxy-16-methoxy-10-azatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadeca-1(16),2,4,6,8,13(17),14-heptaene-11,12-dione

Traditional Name

15-hydroxy-16-methoxy-10-azatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadeca-1(16),2,4,6,8,13(17),14-heptaene-11,12-dione

CAS Registry Number

Not Available

SMILES

COC1=C2C3=CC=CC=C3C=C3NC(=O)C(=O)C(C=C1O)=C23

InChI Identifier

InChI=1S/C17H11NO4/c1-22-16-12(19)7-10-13-11(18-17(21)15(10)20)6-8-4-2-3-5-9(8)14(13)16/h2-7,19H,1H3,(H,18,21)

InChI Key

FPIKZASYTJSPJN-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Aristolochia contorta	Plant	KNApSAcK
Aristolochia elegans	Plant	KNApSAcK
Aristolochia heterophylla Hemsl	Plant	KNApSAcK
Aristolochia indica	LOTUS Database	35616633
Aristolochia kaempferi	LOTUS Database	35616633
Aristolochia liukiuensis	Plant	KNApSAcK
Aristolochia mollissima	Plant	KNApSAcK
Aristolochia triangularis	Plant	KNApSAcK
Fissistigma glaucescens	LOTUS Database	35616633
Fissistigma oldhamii	LOTUS Database	35616633
Houttuynia cordata	Plant	KNApSAcK
Piper sarmentosum	LOTUS Database	35616633
Telitoxicum glaxiovii	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 4,5-dioxoaporphines. These are alkaloids that contains the tetracyclic aporphine skeleton with two C=O groups at the 4- and 5-positions.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Aporphines

Sub Class

4,5-dioxoaporphines

Direct Parent

4,5-dioxoaporphines

Alternative Parents

Substituents

4,5-dioxoaporphine
Phenanthrol
Benzoquinoline
Phenanthrene
Isoquinolone
2-naphthol
Quinolone
Naphthalene
Quinoline
Aryl ketone
Anisole
Phenol ether
Alkyl aryl ether
1-hydroxy-2-unsubstituted benzenoid
Phenol
Benzenoid
Secondary carboxylic acid amide
Carboxamide group
Lactam
Ketone
Organoheterocyclic compound
Azacycle
Carboxylic acid derivative
Ether
Organic oxygen compound
Hydrocarbon derivative
Organic oxide
Organonitrogen compound
Carbonyl group
Organic nitrogen compound
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.85	ALOGPS
logP	2.47	ChemAxon
logS	-4	ALOGPS
pKa (Strongest Acidic)	8.76	ChemAxon
pKa (Strongest Basic)	-4.8	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	75.63 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	81.82 m³·mol⁻¹	ChemAxon
Polarizability	29.25 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10108434

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

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Showing NP-Card for 4,5-Dioxodehydroasimilobine (NP0069010)

MOL for NP0069010 (4,5-Dioxodehydroasimilobine)

3D MOL for NP0069010 (4,5-Dioxodehydroasimilobine)

3D SDF for NP0069010 (4,5-Dioxodehydroasimilobine)

3D-SDF for NP0069010 (4,5-Dioxodehydroasimilobine)

PDB for NP0069010 (4,5-Dioxodehydroasimilobine)

3D PDB for NP0069010 (4,5-Dioxodehydroasimilobine)

SMILES for NP0069010 (4,5-Dioxodehydroasimilobine)

INCHI for NP0069010 (4,5-Dioxodehydroasimilobine)

Structure for NP0069010 (4,5-Dioxodehydroasimilobine)

3D Structure for NP0069010 (4,5-Dioxodehydroasimilobine)