NP-MRD: Showing NP-Card for (-)-Isovoacangine (NP0068060)

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Record Information

Version

2.0

Created at

2022-04-28 12:58:58 UTC

Updated at

2022-04-28 12:58:58 UTC

NP-MRD ID

NP0068060

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(-)-Isovoacangine

Description

596-54-3 Belongs to the class of organic compounds known as ibogan-type alkaloids. These are indole alkaloids with a structure based on the ibogamine skeleton or a derivative thereof. Ibogamine is a pentacyclic heterocyclic compound consisting of an indole fused to an azepane-containing tricyclic moiety ring. Iboga alkaloids arise from the cyclization of a secodine-type precursor through the formation of a 16,21 bond. (-)-Isovoacangine is found in Conopharyngia durissima, Tabernaemontana amblyocarpa Urb., Tabernaemontana apoda Wr.ex Sauv., Tabernaemontana arborea Rose , Tabernaemontana attenuata (Miers) Urb., Tabernaemontana calcarea, Tabernaemontana catharinensis, Tabernaemontana coffeoides Boj., Tabernaemontana crassa Benth., Tabernaemontana divaricata (L.) R.Br. , Tabernaemontana eglandulosa Stapf, Tabernaemontana elegans, Tabernaemontana elegans Stapf., Tabernaemontana johnstonii (Stapf) Pichon, Tabernaemontana orientalis R.Br., Tabernaemontana pachysiphon, Tabernaemontana pachysiphon Stapf. , Tabernaemontana pandacaqui Poir. , Tabernaemontana sessilifolia Bak., Tabernaemontana siphilitica Leeuwenberg and Tabernaemontana wallichiana Steud.. Based on a literature review very few articles have been published on 596-54-3.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282214592D          

 27 31  0  0  1  0            999 V2000
    3.8392   -1.2056    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1937   -1.7194    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.5056   -1.2642    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7259   -0.4691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5501   -0.4329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0747    0.2038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8884    0.0678    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1775   -0.7049    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6529   -1.3416    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9913   -0.8409    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5159   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2658    0.2753    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4008    0.4423    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7068   -0.1659    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.9655   -1.2101    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7126   -1.4820    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9149   -0.6775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0632   -0.0024    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1333   -0.5505    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2311   -1.3810    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2432   -2.0561    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1043   -2.8043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6643   -0.1036    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1356   -2.0717    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3365   -1.8668    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3578   -2.8662    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7808   -3.4559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  1  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  1  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
  4 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 15 14  1  6  0  0  0
 15 16  1  0  0  0  0
  3 16  1  0  0  0  0
 16 17  1  0  0  0  0
 18 17  1  6  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 15 20  1  0  0  0  0
 20 21  1  1  0  0  0
 21 22  1  0  0  0  0
 18 23  1  0  0  0  0
 14 23  1  0  0  0  0
 16 24  1  6  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
M  END

     RDKit          3D

 55 59  0  0  0  0  0  0  0  0999 V2000
   -5.2980   -1.9201   -0.0024 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1241   -1.3003   -0.7221 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1080   -0.8781    0.3477 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7342   -2.1683    1.0761 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2554   -2.0195    1.4487 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4872   -2.2070    0.1336 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1523   -1.4453   -0.8609 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4714   -1.2399   -2.0778 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3557    0.0170   -2.1410 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0335    0.3183   -0.8637 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4019    0.4344    0.3713 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3763    0.7090    1.2390 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.5801    0.7736    0.6329 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8771    1.0181    1.0485 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9527    1.0242    0.1913 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2433    1.2822    0.6948 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3734    1.3035   -0.1151 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7503    0.7772   -1.1505 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4526    0.5294   -1.5852 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3843    0.5261   -0.7168 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0219    0.3040    0.7587 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5339    1.6722    1.0822 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9936    1.9852    2.2024 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4969    2.6365    0.0949 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9441    3.9550    0.2655 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1112   -0.6047    1.9660 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8541   -0.3226   -0.3335 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.3619   -3.0288   -0.1900 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2480   -1.7972    1.0912 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2468   -1.4189   -0.3255 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4579   -0.4175   -1.3080 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6679   -2.0825   -1.3640 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5576   -0.1369    1.0107 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2742   -2.2283    2.0442 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8936   -3.0526    0.4374 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0102   -2.7851    2.1835 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6055   -3.2951   -0.1147 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5757   -2.0249    0.2546 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2430   -1.1495   -2.8987 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1373   -2.1092   -2.3272 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3131    0.8953   -2.3620 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0835   -0.0327   -2.9643 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2836    0.8677    2.2861 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0682    1.2151    2.0934 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4310    2.1598   -0.8110 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4296    0.3296   -0.6489 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2663    1.3384    0.5449 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6157    0.7896   -1.7943 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2791    0.3365   -2.6201 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5662    4.5408   -0.6090 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5552    4.4316    1.1725 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0631    4.0276    0.1887 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9805   -0.3808    2.6091 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1667   -0.5457    2.5477 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1536    0.3936   -1.1109 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 15 18  2  0
 18 19  1  0
 19 20  2  0
 11 21  1  0
 21 26  1  0
 21 27  1  0
 21 22  1  1
 22 23  2  0
 22 24  1  0
 24 25  1  0
 27  3  1  0
 26  5  1  0
 27  7  1  0
 20 10  1  0
 20 13  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  2 31  1  0
  2 32  1  0
  3 33  1  1
  4 34  1  0
  4 35  1  0
  5 36  1  1
  6 37  1  0
  6 38  1  0
  8 39  1  0
  8 40  1  0
  9 41  1  0
  9 42  1  0
 12 43  1  0
 14 44  1  0
 17 45  1  0
 17 46  1  0
 17 47  1  0
 18 48  1  0
 19 49  1  0
 26 53  1  0
 26 54  1  0
 27 55  1  6
 25 50  1  0
 25 51  1  0
 25 52  1  0
M  END


  Mrv1652304282214592D          

 27 31  0  0  1  0            999 V2000
    3.8392   -1.2056    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1937   -1.7194    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.5056   -1.2642    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7259   -0.4691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5501   -0.4329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0747    0.2038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8884    0.0678    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1775   -0.7049    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6529   -1.3416    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9913   -0.8409    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5159   -0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2658    0.2753    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4008    0.4423    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7068   -0.1659    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.9655   -1.2101    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7126   -1.4820    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9149   -0.6775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0632   -0.0024    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1333   -0.5505    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2311   -1.3810    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2432   -2.0561    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1043   -2.8043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6643   -0.1036    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1356   -2.0717    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3365   -1.8668    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3578   -2.8662    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7808   -3.4559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  1  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  1  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
  4 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 15 14  1  6  0  0  0
 15 16  1  0  0  0  0
  3 16  1  0  0  0  0
 16 17  1  0  0  0  0
 18 17  1  6  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 15 20  1  0  0  0  0
 20 21  1  1  0  0  0
 21 22  1  0  0  0  0
 18 23  1  0  0  0  0
 14 23  1  0  0  0  0
 16 24  1  6  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0068060

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC[C@H]1C[C@H]2CN3CCC4=C(NC5=CC(OC)=CC=C45)[C@](C2)([C@H]13)C(=O)OC

> <INCHI_IDENTIFIER>
InChI=1S/C22H28N2O3/c1-4-14-9-13-11-22(21(25)27-3)19-17(7-8-24(12-13)20(14)22)16-6-5-15(26-2)10-18(16)23-19/h5-6,10,13-14,20,23H,4,7-9,11-12H2,1-3H3/t13-,14+,20+,22-/m1/s1

> <INCHI_KEY>
FPUHKQMDWMVBRI-PHKAQXKASA-N

> <FORMULA>
C22H28N2O3

> <MOLECULAR_WEIGHT>
368.477

> <EXACT_MASS>
368.20999277

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
55

> <JCHEM_AVERAGE_POLARIZABILITY>
41.82268123738785

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (1S,15R,17S,18S)-17-ethyl-6-methoxy-3,13-diazapentacyclo[13.3.1.0^{2,10}.0^{4,9}.0^{13,18}]nonadeca-2(10),4,6,8-tetraene-1-carboxylate

> <ALOGPS_LOGP>
3.96

> <JCHEM_LOGP>
3.361197428333335

> <ALOGPS_LOGS>
-4.10

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
16.29356754586762

> <JCHEM_PKA_STRONGEST_BASIC>
8.492193443326006

> <JCHEM_POLAR_SURFACE_AREA>
54.56

> <JCHEM_REFRACTIVITY>
104.4017

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.95e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl (1S,15R,17S,18S)-17-ethyl-6-methoxy-3,13-diazapentacyclo[13.3.1.0^{2,10}.0^{4,9}.0^{13,18}]nonadeca-2(10),4,6,8-tetraene-1-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       7.167  -2.251   0.000  0.00  0.00           C+0
HETATM    2  N   UNK     0       5.962  -3.209   0.000  0.00  0.00           N+0
HETATM    3  C   UNK     0       4.677  -2.360   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.088  -0.876   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       6.627  -0.808   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       7.606   0.380   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       9.125   0.127   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       9.665  -1.316   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.685  -2.504   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      11.184  -1.570   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0      12.163  -0.381   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.229   0.514   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.615   0.826   0.000  0.00  0.00           C+0
HETATM   14  N   UNK     0       1.319  -0.310   0.000  0.00  0.00           N+0
HETATM   15  C   UNK     0       1.802  -2.259   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.197  -2.766   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.574  -1.265   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.985  -0.004   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.249  -1.028   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.431  -2.578   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -0.454  -3.838   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       0.195  -5.235   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       3.107  -0.193   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.120  -3.867   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       0.628  -3.485   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0       2.535  -5.350   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0       1.458  -6.451   0.000  0.00  0.00           C+0
CONECT    1    2    5    9                                                  
CONECT    2    1    3                                                       
CONECT    3    2    4   16                                                  
CONECT    4    3    5   12                                                  
CONECT    5    4    1    6                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8    1                                                       
CONECT   10    8   11                                                       
CONECT   11   10                                                            
CONECT   12    4   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   23                                                  
CONECT   15   14   16   20                                                  
CONECT   16   15    3   17   24                                             
CONECT   17   16   18                                                       
CONECT   18   17   19   23                                                  
CONECT   19   18   20                                                       
CONECT   20   19   15   21                                                  
CONECT   21   20   22                                                       
CONECT   22   21                                                            
CONECT   23   18   14                                                       
CONECT   24   16   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   62    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₂H₂₈N₂O₃

Average Mass

368.4770 Da

Monoisotopic Mass

368.20999 Da

IUPAC Name

methyl (1S,15R,17S,18S)-17-ethyl-6-methoxy-3,13-diazapentacyclo[13.3.1.0^{2,10}.0^{4,9}.0^{13,18}]nonadeca-2(10),4,6,8-tetraene-1-carboxylate

Traditional Name

methyl (1S,15R,17S,18S)-17-ethyl-6-methoxy-3,13-diazapentacyclo[13.3.1.0^{2,10}.0^{4,9}.0^{13,18}]nonadeca-2(10),4,6,8-tetraene-1-carboxylate

CAS Registry Number

Not Available

SMILES

CC[C@H]1C[C@H]2CN3CCC4=C(NC5=CC(OC)=CC=C45)[C@](C2)([C@H]13)C(=O)OC

InChI Identifier

InChI=1S/C22H28N2O3/c1-4-14-9-13-11-22(21(25)27-3)19-17(7-8-24(12-13)20(14)22)16-6-5-15(26-2)10-18(16)23-19/h5-6,10,13-14,20,23H,4,7-9,11-12H2,1-3H3/t13-,14+,20+,22-/m1/s1

InChI Key

FPUHKQMDWMVBRI-PHKAQXKASA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Conopharyngia durissima	Plant	KNApSAcK
Tabernaemontana amblyocarpa Urb.	Plant	KNApSAcK
Tabernaemontana apoda Wr.ex Sauv.	Plant	KNApSAcK
Tabernaemontana arborea	Plant	KNApSAcK
Tabernaemontana attenuata (Miers) Urb.	Plant	KNApSAcK
Tabernaemontana calcarea	Plant	KNApSAcK
Tabernaemontana catharinensis	LOTUS Database	35616633
Tabernaemontana coffeoides Boj.	Plant	KNApSAcK
Tabernaemontana crassa	Plant	KNApSAcK
Tabernaemontana divaricata (L.) R.Br.	Plant	KNApSAcK
Tabernaemontana eglandulosa	Plant	KNApSAcK
Tabernaemontana elegans	LOTUS Database	35616633
Tabernaemontana elegans Stapf.	Plant	KNApSAcK
Tabernaemontana johnstonii (Stapf) Pichon	Plant	KNApSAcK
Tabernaemontana orientalis R.Br.	Plant	KNApSAcK
Tabernaemontana pachysiphon	LOTUS Database	35616633
Tabernaemontana pachysiphon Stapf.	Plant	KNApSAcK
Tabernaemontana pandacaqui Poir.	Plant	KNApSAcK
Tabernaemontana sessilifolia Bak.	Plant	KNApSAcK
Tabernaemontana siphilitica Leeuwenberg	Plant	KNApSAcK
Tabernaemontana wallichiana Steud.	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as ibogan-type alkaloids. These are indole alkaloids with a structure based on the ibogamine skeleton or a derivative thereof. Ibogamine is a pentacyclic heterocyclic compound consisting of an indole fused to an azepane-containing tricyclic moiety ring. Iboga alkaloids arise from the cyclization of a secodine-type precursor through the formation of a 16,21 bond.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Ibogan-type alkaloids

Sub Class

Not Available

Direct Parent

Ibogan-type alkaloids

Alternative Parents

Substituents

Ibogan skeleton
Catharanthine skeleton
Pyrroloazepine
3-alkylindole
Indole
Indole or derivatives
Piperidinecarboxylic acid
Anisole
Alkyl aryl ether
Azepine
Aralkylamine
Piperidine
Benzenoid
Methyl ester
Pyrrole
Heteroaromatic compound
Tertiary amine
Tertiary aliphatic amine
Amino acid or derivatives
Carboxylic acid ester
Organoheterocyclic compound
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Azacycle
Ether
Amine
Organic oxide
Hydrocarbon derivative
Organonitrogen compound
Carbonyl group
Organopnictogen compound
Organic oxygen compound
Organooxygen compound
Organic nitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.96	ALOGPS
logP	3.36	ChemAxon
logS	-4.1	ALOGPS
pKa (Strongest Acidic)	16.29	ChemAxon
pKa (Strongest Basic)	8.49	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	54.56 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	104.4 m³·mol⁻¹	ChemAxon
Polarizability	41.82 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00025916

Chemspider ID

89620

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

99199

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for (-)-Isovoacangine (NP0068060)

MOL for NP0068060 ((-)-Isovoacangine)

3D MOL for NP0068060 ((-)-Isovoacangine)

3D SDF for NP0068060 ((-)-Isovoacangine)

3D-SDF for NP0068060 ((-)-Isovoacangine)

PDB for NP0068060 ((-)-Isovoacangine)

3D PDB for NP0068060 ((-)-Isovoacangine)

SMILES for NP0068060 ((-)-Isovoacangine)

INCHI for NP0068060 ((-)-Isovoacangine)

Structure for NP0068060 ((-)-Isovoacangine)

3D Structure for NP0068060 ((-)-Isovoacangine)