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Record Information
Version2.0
Created at2022-04-28 12:40:11 UTC
Updated at2022-04-28 12:40:12 UTC
NP-MRD IDNP0067828
Secondary Accession NumbersNone
Natural Product Identification
Common Name(+)-Codamine
Description(S)-codamine belongs to the class of organic compounds known as benzylisoquinolines. These are organic compounds containing an isoquinoline to which a benzyl group is attached. (+)-Codamine is found in Bongardia chrysogonum, Eschscholzia californica , Glaucium flavum , Polyalthia cerasoides , Pachygone somniferum Miq., Papaver somniferum L. , Romneya coulteri, Stephania pierrei, Stephania pierrei Diels(=S.erecta Craib) and Xylopia parviflora . (+)-Codamine was first documented in 1999 (PMID: 10395492). Based on a literature review a small amount of articles have been published on (S)-codamine (PMID: 16566764) (PMID: 18374345) (PMID: 17845001) (PMID: 15272474).
Structure
Thumb
Synonyms
ValueSource
(+)-CodamineChEBI
(S)-(+)-CodamineChEBI
(S)-1-[(3,4-Dimethoxyphenyl)methyl]-1,2,3,4-tetrahydro-6-methoxy-2-methylisoquinolin-7-olChEBI
7-DesmethyllaudanosineChEBI
CodamineChEBI
L-(+)-CodamineChEBI
Chemical FormulaC20H25NO4
Average Mass343.4230 Da
Monoisotopic Mass343.17836 Da
IUPAC Name(1S)-1-[(3,4-dimethoxyphenyl)methyl]-6-methoxy-2-methyl-1,2,3,4-tetrahydroisoquinolin-7-ol
Traditional Name(1S)-1-[(3,4-dimethoxyphenyl)methyl]-6-methoxy-2-methyl-3,4-dihydro-1H-isoquinolin-7-ol
CAS Registry NumberNot Available
SMILES
COC1=C(OC)C=C(C[C@@H]2N(C)CCC3=CC(OC)=C(O)C=C23)C=C1
InChI Identifier
InChI=1S/C20H25NO4/c1-21-8-7-14-11-19(24-3)17(22)12-15(14)16(21)9-13-5-6-18(23-2)20(10-13)25-4/h5-6,10-12,16,22H,7-9H2,1-4H3/t16-/m0/s1
InChI KeyOKORHWXYDBSYNO-INIZCTEOSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Bongardia chrysogonumLOTUS Database
Eschscholzia californicaPlant
Glaucium flavumPlant
Huberantha cerasoidesPlant
Pachygone somniferum Miq.Plant
Papaver somniferumPlant
Romneya coulteriPlant
Stephania pierreiLOTUS Database
Stephania pierrei Diels(=S.erecta Craib)Plant
Xylopia parvifloraPlant
Chemical Taxonomy
Description Belongs to the class of organic compounds known as benzylisoquinolines. These are organic compounds containing an isoquinoline to which a benzyl group is attached.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassIsoquinolines and derivatives
Sub ClassBenzylisoquinolines
Direct ParentBenzylisoquinolines
Alternative Parents
Substituents
  • Benzylisoquinoline
  • O-dimethoxybenzene
  • Dimethoxybenzene
  • Tetrahydroisoquinoline
  • Phenoxy compound
  • Anisole
  • Phenol ether
  • Methoxybenzene
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Aralkylamine
  • Monocyclic benzene moiety
  • Benzenoid
  • Tertiary aliphatic amine
  • Tertiary amine
  • Ether
  • Azacycle
  • Organonitrogen compound
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organopnictogen compound
  • Organic oxygen compound
  • Organooxygen compound
  • Amine
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.2ALOGPS
logP3.25ChemAxon
logS-4ALOGPS
pKa (Strongest Acidic)10.12ChemAxon
pKa (Strongest Basic)7.81ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area51.16 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity98.32 m³·mol⁻¹ChemAxon
Polarizability38.12 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00025654
Chemspider ID16738933
KEGG Compound IDNot Available
BioCyc IDCPD-22271
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound20056510
PDB IDNot Available
ChEBI ID145336
Good Scents IDNot Available
References
General References
  1. Toske SG, Cooper SD, Morello DR, Hays PA, Casale JF, Casale E: Neutral heroin impurities from tetrahydrobenzylisoquinoline alkaloids. J Forensic Sci. 2006 Mar;51(2):308-20. doi: 10.1111/j.1556-4029.2006.00057.x. [PubMed:16566764 ]
  2. Lee SS, Doskotch RW: Four dimeric aporphine-containing alkaloids from Thalictrum fauriei. J Nat Prod. 1999 Jun;62(6):803-10. doi: 10.1021/np980311b. [PubMed:10395492 ]
  3. Lurie IS, Toske SG: Applicability of ultra-performance liquid chromatography-tandem mass spectrometry for heroin profiling. J Chromatogr A. 2008 Apr 25;1188(2):322-6. doi: 10.1016/j.chroma.2008.03.011. Epub 2008 Mar 18. [PubMed:18374345 ]
  4. Kanokmedhakul S, Kanokmedhakul K, Lekphrom R: Bioactive constituents of the roots of Polyalthia cerasoides. J Nat Prod. 2007 Sep;70(9):1536-8. doi: 10.1021/np070293a. Epub 2007 Sep 11. [PubMed:17845001 ]
  5. Al-Amri AM, Smith RM, El-Haj BM, Juma'a MH: The GC-MS detection and characterization of reticuline as a marker of opium use. Forensic Sci Int. 2004 May 28;142(1):61-9. doi: 10.1016/j.forsciint.2004.02.006. [PubMed:15272474 ]