NP-MRD: Showing NP-Card for 3alpha-Benzoyloxytropane (NP0067740)

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Record Information

Version

2.0

Created at

2022-04-28 12:35:30 UTC

Updated at

2022-04-28 12:35:30 UTC

NP-MRD ID

NP0067740

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3alpha-Benzoyloxytropane

Description

(1R,3R,5S)-8-methyl-8-azabicyclo[3.2.1]Octan-3-yl benzoate belongs to the class of organic compounds known as benzoic acid esters. These are ester derivatives of benzoic acid. 3alpha-Benzoyloxytropane is found in Bruguiera exaristata, Bruguiera exaristata Ding Hou, Bruguiera sexangula (Lour.) poir., Crossostylis sebertii, Erythroxylum argentinum O.E.Schulz, Erythroxylum coca , Erythroxylum ellipticum, Erythroxylum ellipticum R.Br., Erythroxylum hypericifolium Lam. , Erythroxylum novogranatense and Erythroxylum sideroxyloides Lam.. Based on a literature review very few articles have been published on (1R,3R,5S)-8-methyl-8-azabicyclo[3.2.1]Octan-3-yl benzoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 37 39  0  0  0  0  0  0  0  0999 V2000
   -3.8408   -0.9663    1.5475 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2198   -0.1066    0.6923 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8764   -0.4437   -0.6189 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9356    0.9328   -1.3002 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7306    1.9273   -0.1594 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5669    1.0528    1.0950 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.0665    0.7660    1.1990 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5578    0.2499   -0.1313 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7735   -0.2177    0.0631 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8643    0.3701   -0.5599 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7101    1.3479   -1.3266 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2068   -0.1388   -0.3337 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3896   -1.2137    0.5072 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6569   -1.7024    0.7271 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7601   -1.1291    0.1141 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5709   -0.0659   -0.7165 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3030    0.4335   -0.9451 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4093   -0.8628   -0.6572 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3932   -0.4226    2.3553 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1822   -1.6955    2.0334 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6380   -1.5641    1.0221 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5378   -1.1620   -1.1009 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1518    1.0430   -2.0569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9388    1.0452   -1.7651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6972    2.4899   -0.0216 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8830    2.5888   -0.3161 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9407    1.5445    1.9842 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8881    0.0444    2.0125 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5728    1.7220    1.4523 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4936    1.1047   -0.8288 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5499   -1.6804    0.9982 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7760   -2.5389    1.3847 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7279   -1.5602    0.3287 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4240    0.4082   -1.2154 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1393    1.2789   -1.6037 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2489   -1.7454   -0.0096 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0827   -1.1338   -1.6671 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8 18  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
  6  2  1  0
 17 12  1  0
 18  3  1  0
  1 19  1  0
  1 20  1  0
  1 21  1  0
  3 22  1  6
  4 23  1  0
  4 24  1  0
  5 25  1  0
  5 26  1  0
  6 27  1  1
  7 28  1  0
  7 29  1  0
  8 30  1  6
 18 36  1  0
 18 37  1  0
 13 31  1  0
 14 32  1  0
 15 33  1  0
 16 34  1  0
 17 35  1  0
M  END


  Mrv1652304282214352D          

 18 20  0  0  1  0            999 V2000
    0.1593    0.4941    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1593   -0.3309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8044   -0.8453    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6087   -0.6617    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9666    0.0816    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6087    0.8249    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8044    1.0085    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0361    0.0816    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.8207    0.3366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7916    0.0816    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2041    0.7961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7916    1.5106    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0291    0.7961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4416    1.5106    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2666    1.5106    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6791    0.7961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2666    0.0816    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4416    0.0816    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  1  7  1  0  0  0  0
  7  8  1  1  0  0  0
  3  8  1  1  0  0  0
  8  9  1  0  0  0  0
  5 10  1  1  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 13 18  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0067740

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CN1[C@H]2CC[C@@H]1C[C@H](C2)OC(=O)C1=CC=CC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C15H19NO2/c1-16-12-7-8-13(16)10-14(9-12)18-15(17)11-5-3-2-4-6-11/h2-6,12-14H,7-10H2,1H3/t12-,13+,14-

> <INCHI_KEY>
XQJMXPAEFMWDOZ-BTTYYORXSA-N

> <FORMULA>
C15H19NO2

> <MOLECULAR_WEIGHT>
245.322

> <EXACT_MASS>
245.141578856

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
37

> <JCHEM_AVERAGE_POLARIZABILITY>
27.28616997483354

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,3R,5S)-8-methyl-8-azabicyclo[3.2.1]octan-3-yl benzoate

> <ALOGPS_LOGP>
2.69

> <JCHEM_LOGP>
2.5288605136666664

> <ALOGPS_LOGS>
-2.32

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_BASIC>
9.354899751187046

> <JCHEM_POLAR_SURFACE_AREA>
29.54

> <JCHEM_REFRACTIVITY>
70.41580000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.17e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,3R,5S)-8-methyl-8-azabicyclo[3.2.1]octan-3-yl benzoate

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       0.297   0.922   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.297  -0.618   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.501  -1.578   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.003  -1.235   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.671   0.152   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.003   1.540   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.501   1.883   0.000  0.00  0.00           C+0
HETATM    8  N   UNK     0       1.934   0.152   0.000  0.00  0.00           N+0
HETATM    9  C   UNK     0       3.399   0.628   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       5.211   0.152   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       5.981   1.486   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       5.211   2.820   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       7.521   1.486   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       8.291   2.820   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       9.831   2.820   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.601   1.486   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       9.831   0.152   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.291   0.152   0.000  0.00  0.00           C+0
CONECT    1    2    7                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4    8                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    1    8                                                  
CONECT    8    7    3    9                                                  
CONECT    9    8                                                            
CONECT   10    5   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   18                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   13                                                       
MASTER        0    0    0    0    0    0    0    0   18    0   40    0
END

View in JSmol

Synonyms

Value	Source
(1R,3R,5S)-8-Methyl-8-azabicyclo[3.2.1]octan-3-yl benzoic acid	Generator

Chemical Formula

C₁₅H₁₉NO₂

Average Mass

245.3220 Da

Monoisotopic Mass

245.14158 Da

IUPAC Name

(1R,3R,5S)-8-methyl-8-azabicyclo[3.2.1]octan-3-yl benzoate

Traditional Name

(1R,3R,5S)-8-methyl-8-azabicyclo[3.2.1]octan-3-yl benzoate

CAS Registry Number

Not Available

SMILES

CN1[C@H]2CC[C@@H]1C[C@H](C2)OC(=O)C1=CC=CC=C1

InChI Identifier

InChI=1S/C15H19NO2/c1-16-12-7-8-13(16)10-14(9-12)18-15(17)11-5-3-2-4-6-11/h2-6,12-14H,7-10H2,1H3/t12-,13+,14-

InChI Key

XQJMXPAEFMWDOZ-BTTYYORXSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Bruguiera exaristata	LOTUS Database	35616633
Bruguiera exaristata Ding Hou	Plant	KNApSAcK
Bruguiera sexangula (Lour.) poir.	Plant	KNApSAcK
Crossostylis sebertii	Plant	KNApSAcK
Erythroxylum argentinum	Plant	KNApSAcK
Erythroxylum coca	Plant	KNApSAcK
Erythroxylum ellipticum	LOTUS Database	35616633
Erythroxylum ellipticum R.Br.	Plant	KNApSAcK
Erythroxylum hypericifolium Lam.	Plant	KNApSAcK
Erythroxylum novogranatense	Plant	KNApSAcK
Erythroxylum sideroxyloides Lam.	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as benzoic acid esters. These are ester derivatives of benzoic acid.

Kingdom

Organic compounds

Super Class

Benzenoids

Class

Benzene and substituted derivatives

Sub Class

Benzoic acids and derivatives

Direct Parent

Benzoic acid esters

Alternative Parents

Substituents

Benzoate ester
Tropane alkaloid
Benzoyl
Piperidine
N-alkylpyrrolidine
Pyrrolidine
Amino acid or derivatives
Carboxylic acid ester
Tertiary aliphatic amine
Tertiary amine
Carboxylic acid derivative
Azacycle
Organoheterocyclic compound
Organonitrogen compound
Hydrocarbon derivative
Amine
Organic oxide
Organic oxygen compound
Organooxygen compound
Organic nitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.69	ALOGPS
logP	2.53	ChemAxon
logS	-2.3	ALOGPS
pKa (Strongest Basic)	9.35	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	29.54 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	70.42 m³·mol⁻¹	ChemAxon
Polarizability	27.29 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

10194103

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for 3alpha-Benzoyloxytropane (NP0067740)

MOL for NP0067740 (3alpha-Benzoyloxytropane)

3D MOL for NP0067740 (3alpha-Benzoyloxytropane)

3D SDF for NP0067740 (3alpha-Benzoyloxytropane)

3D-SDF for NP0067740 (3alpha-Benzoyloxytropane)

PDB for NP0067740 (3alpha-Benzoyloxytropane)

3D PDB for NP0067740 (3alpha-Benzoyloxytropane)

SMILES for NP0067740 (3alpha-Benzoyloxytropane)

INCHI for NP0067740 (3alpha-Benzoyloxytropane)

Structure for NP0067740 (3alpha-Benzoyloxytropane)

3D Structure for NP0067740 (3alpha-Benzoyloxytropane)