NP-MRD: Showing NP-Card for Spiramine J 15-acetate (NP0067269)

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Record Information

Version

2.0

Created at

2022-04-28 11:48:42 UTC

Updated at

2022-04-28 11:48:42 UTC

NP-MRD ID

NP0067269

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Spiramine J 15-acetate

Description

(1R,2S,4S,6S,7R,8R,10R,11R,12R)-8-hydroxy-11-methyl-5-methylidene-12-(2-oxopropyl)-13-azapentacyclo[9.3.3.2⁴,⁷.0¹,¹⁰.0²,⁷]Nonadec-13-en-6-yl acetate belongs to the class of organic compounds known as atisane diterpenoids. These are diterpenoids with a structure based on the atisane skeleton, which is a tetracyclic compound containing the [2,2,2]bicyc1ic ring system with the C15-C16 bridge attached at C12. Spiramine J 15-acetate is found in Spiraea japonica var.acuminata. Based on a literature review very few articles have been published on (1R,2S,4S,6S,7R,8R,10R,11R,12R)-8-hydroxy-11-methyl-5-methylidene-12-(2-oxopropyl)-13-azapentacyclo[9.3.3.2⁴,⁷.0¹,¹⁰.0²,⁷]Nonadec-13-en-6-yl acetate.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652304282213482D          

 30 34  0  0  1  0            999 V2000
    4.0912   -0.1339    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3132   -1.0748    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.2185   -1.1601    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2572   -1.9842    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5628   -2.4297    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6015   -3.2538    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8298   -2.0512    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9650   -0.8090    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.2447   -0.0328    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8936    0.7137    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1174    0.9934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3708    0.6423    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.9865   -0.2826    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.5184   -0.8342    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6744   -0.7378    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0071   -0.1477    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0414   -0.0569    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4352    0.5179    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6103    0.5070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0270    1.1092    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8725    1.1895    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5027    0.5804    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4336    0.3632    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3643   -0.5609    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7003   -0.8080    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8792   -0.8882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5381   -1.6393    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3992   -0.2172    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3389   -1.4915    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5751   -1.3644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  1  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  3  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 12 11  1  6  0  0  0
  1 12  1  0  0  0  0
 12 13  1  0  0  0  0
  8 13  1  0  0  0  0
 13 14  1  1  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 20 18  1  6  0  0  0
 20 21  1  0  0  0  0
 22 21  1  1  0  0  0
 12 22  1  0  0  0  0
 16 22  1  0  0  0  0
 20 23  1  0  0  0  0
 23 24  1  0  0  0  0
 16 24  1  1  0  0  0
 17 25  1  1  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 26 28  1  0  0  0  0
 15 29  1  1  0  0  0
  8 30  1  6  0  0  0
M  END


  Mrv1652304282213482D          

 30 34  0  0  1  0            999 V2000
    4.0912   -0.1339    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3132   -1.0748    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.2185   -1.1601    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2572   -1.9842    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5628   -2.4297    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6015   -3.2538    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8298   -2.0512    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9650   -0.8090    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.2447   -0.0328    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8936    0.7137    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1174    0.9934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3708    0.6423    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.9865   -0.2826    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.5184   -0.8342    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6744   -0.7378    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0071   -0.1477    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0414   -0.0569    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4352    0.5179    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6103    0.5070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0270    1.1092    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8725    1.1895    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5027    0.5804    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4336    0.3632    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3643   -0.5609    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7003   -0.8080    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8792   -0.8882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5381   -1.6393    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3992   -0.2172    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3389   -1.4915    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5751   -1.3644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  1  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  3  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 12 11  1  6  0  0  0
  1 12  1  0  0  0  0
 12 13  1  0  0  0  0
  8 13  1  0  0  0  0
 13 14  1  1  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 20 18  1  6  0  0  0
 20 21  1  0  0  0  0
 22 21  1  1  0  0  0
 12 22  1  0  0  0  0
 16 22  1  0  0  0  0
 20 23  1  0  0  0  0
 23 24  1  0  0  0  0
 16 24  1  1  0  0  0
 17 25  1  1  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 26 28  1  0  0  0  0
 15 29  1  1  0  0  0
  8 30  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0067269

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)C[C@H]1N=C[C@]23CCC[C@]1(C)[C@H]2C[C@@H](O)[C@@]12CC[C@@H](C[C@@H]31)C(=C)[C@@H]2OC(C)=O

> <INCHI_IDENTIFIER>
InChI=1S/C25H35NO4/c1-14(27)10-20-23(4)7-5-8-24(13-26-20)18(23)12-21(29)25-9-6-17(11-19(24)25)15(2)22(25)30-16(3)28/h13,17-22,29H,2,5-12H2,1,3-4H3/t17-,18+,19-,20+,21+,22-,23+,24+,25+/m0/s1

> <INCHI_KEY>
HBYCKZGWOOBEHA-LEHSJXASSA-N

> <FORMULA>
C25H35NO4

> <MOLECULAR_WEIGHT>
413.558

> <EXACT_MASS>
413.256608611

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       7.637  -0.250   0.000  0.00  0.00           C+0
HETATM    2  N   UNK     0       8.051  -2.006   0.000  0.00  0.00           N+0
HETATM    3  C   UNK     0       9.741  -2.166   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       9.813  -3.704   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       8.517  -4.535   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       8.589  -6.074   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       7.149  -3.829   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      11.135  -1.510   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      11.657  -0.061   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      11.001   1.332   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       9.552   1.854   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       8.159   1.199   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       9.308  -0.528   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       8.434  -1.557   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.859  -1.377   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.613  -0.276   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.811  -0.106   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.679   0.967   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.139   0.946   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       3.784   2.071   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       5.362   2.220   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       6.538   1.083   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       4.543   0.678   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       4.413  -1.047   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       3.174  -1.508   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       1.641  -1.658   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       1.004  -3.060   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       0.745  -0.405   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       6.233  -2.784   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0      12.274  -2.547   0.000  0.00  0.00           C+0
CONECT    1    2   12                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4    8                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5                                                            
CONECT    8    3    9   13   30                                             
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11    1   13   22                                             
CONECT   13   12    8   14                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   29                                                  
CONECT   16   15   17   22   24                                             
CONECT   17   16   18   25                                                  
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21   23                                                  
CONECT   21   20   22                                                       
CONECT   22   21   12   16                                                  
CONECT   23   20   24                                                       
CONECT   24   23   16                                                       
CONECT   25   17   26                                                       
CONECT   26   25   27   28                                                  
CONECT   27   26                                                            
CONECT   28   26                                                            
CONECT   29   15                                                            
CONECT   30    8                                                            
MASTER        0    0    0    0    0    0    0    0   30    0   68    0
END

View in JSmol

Synonyms

Value	Source
(1R,2S,4S,6S,7R,8R,10R,11R,12R)-8-Hydroxy-11-methyl-5-methylidene-12-(2-oxopropyl)-13-azapentacyclo[9.3.3.2,.0,.0,]nonadec-13-en-6-yl acetic acid	Generator

Chemical Formula

C₂₅H₃₅NO₄

Average Mass

413.5580 Da

Monoisotopic Mass

413.25661 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

CC(=O)C[C@H]1N=C[C@]23CCC[C@]1(C)[C@H]2C[C@@H](O)[C@@]12CC[C@@H](C[C@@H]31)C(=C)[C@@H]2OC(C)=O

InChI Identifier

InChI=1S/C25H35NO4/c1-14(27)10-20-23(4)7-5-8-24(13-26-20)18(23)12-21(29)25-9-6-17(11-19(24)25)15(2)22(25)30-16(3)28/h13,17-22,29H,2,5-12H2,1,3-4H3/t17-,18+,19-,20+,21+,22-,23+,24+,25+/m0/s1

InChI Key

HBYCKZGWOOBEHA-LEHSJXASSA-N

Experimental Spectra

Not Available

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Spiraea japonica var.acuminata	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as atisane diterpenoids. These are diterpenoids with a structure based on the atisane skeleton, which is a tetracyclic compound containing the [2,2,2]bicyc1ic ring system with the C15-C16 bridge attached at C12.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Atisane diterpenoids

Alternative Parents

Substituents

Atisane diterpenoid
Alkaloid or derivatives
Tetrahydropyridine
Cyclic alcohol
Secondary alcohol
Ketone
Carboxylic acid ester
Azacycle
Organoheterocyclic compound
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Imine
Carbonyl group
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163104237

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Spiramine J 15-acetate (NP0067269)

MOL for NP0067269 (Spiramine J 15-acetate)

3D MOL for NP0067269 (Spiramine J 15-acetate)

3D SDF for NP0067269 (Spiramine J 15-acetate)

3D-SDF for NP0067269 (Spiramine J 15-acetate)

PDB for NP0067269 (Spiramine J 15-acetate)

3D PDB for NP0067269 (Spiramine J 15-acetate)

SMILES for NP0067269 (Spiramine J 15-acetate)

INCHI for NP0067269 (Spiramine J 15-acetate)

Structure for NP0067269 (Spiramine J 15-acetate)

3D Structure for NP0067269 (Spiramine J 15-acetate)