NP-MRD: Showing NP-Card for Iwamide (NP0066979)

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Record Information

Version

2.0

Created at

2022-04-28 11:11:20 UTC

Updated at

2022-04-28 11:11:20 UTC

NP-MRD ID

NP0066979

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Iwamide

Description

N-[6-(2,4-dihydroxy-3-methoxyphenyl)-2H-naphtho[2,3-d][1,3]dioxol-5-yl]-N-methylformamide belongs to the class of organic compounds known as secobenzophenanthridine alkaloids. These are alkaloids containing a secobenzophenanthridine skeleton. Iwamide is found in Zanthoxylum arnottianum Maxim. N-[6-(2,4-dihydroxy-3-methoxyphenyl)-2H-naphtho[2,3-d][1,3]dioxol-5-yl]-N-methylformamide is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004261500222D          

 27 30  0  0  0  0            999 V2000
   -2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3570   -0.1576    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8419   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3570   -1.4924    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  3  9  1  0  0  0  0
  9 10  1  0  0  0  0
  8 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 16 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 14 22  1  0  0  0  0
 22 23  2  0  0  0  0
 11 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 26 27  2  0  0  0  0
M  END

     RDKit          3D

 44 47  0  0  0  0  0  0  0  0999 V2000
    5.9438    0.8289   -0.5974 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9787    0.0183   -1.2057 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8987   -0.5233   -0.5128 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9974   -1.7534    0.0915 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1944   -2.4712    0.0114 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9123   -2.2631    0.7697 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7432   -1.5208    0.8267 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5957   -0.2785    0.2346 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3655    0.4506    0.3717 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3724    1.7517    0.8647 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8234    2.4086    1.0024 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0167    1.7879    0.6571 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2138    2.4937    0.8103 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4126    1.9098    0.4753 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4168    0.6297   -0.0097 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2414   -0.0528   -0.1562 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0353    0.4986    0.1676 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8125   -0.1785    0.0247 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8889   -1.5019   -0.4949 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5348   -2.6170    0.1304 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2650   -1.7152   -1.7555 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3261   -0.7857   -2.4004 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7483    0.2651   -0.2744 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5849    1.4075   -0.0993 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7245    2.3524    0.5184 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7063    0.2066   -0.4410 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6608    1.4138   -1.0565 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8220    0.9429    0.4845 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9842    1.8200   -1.1276 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9325    0.3344   -0.7549 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9798   -2.0812   -0.4906 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0029   -3.2305    1.2399 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9386   -1.9962    1.3938 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3268    2.1565    1.1154 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8278    3.4379    1.3919 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1403    3.5026    1.1992 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2774   -1.0590   -0.5452 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0701   -2.3761    1.0567 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2120   -3.1889   -0.5414 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7238   -3.3671    0.3754 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2823   -2.7121   -2.2075 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9106    1.7947   -1.0961 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4646    1.1771    0.5244 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9457    2.0827   -1.1473 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  4  6  1  0
  6  7  2  0
  7  8  1  0
  8 26  2  0
 26 27  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  2  0
 14 25  1  0
 25 24  1  0
 24 23  1  0
 23 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  2  0
 26  3  1  0
 18  9  1  0
 17 12  1  0
 15 14  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  5 31  1  0
  6 32  1  0
  7 33  1  0
 27 44  1  0
 10 34  1  0
 11 35  1  0
 13 36  1  0
 24 42  1  0
 24 43  1  0
 16 37  1  0
 20 38  1  0
 20 39  1  0
 20 40  1  0
 21 41  1  0
M  END


  Mrv1533004261500222D          

 27 30  0  0  0  0            999 V2000
   -2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3570   -0.1576    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8419   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3570   -1.4924    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  3  9  1  0  0  0  0
  9 10  1  0  0  0  0
  8 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 16 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 14 22  1  0  0  0  0
 22 23  2  0  0  0  0
 11 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 26 27  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0066979

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=C(O)C=CC(=C1O)C1=CC=C2C=C3OCOC3=CC2=C1N(C)C=O

> <INCHI_IDENTIFIER>
InChI=1S/C20H17NO6/c1-21(9-22)18-12(13-5-6-15(23)20(25-2)19(13)24)4-3-11-7-16-17(8-14(11)18)27-10-26-16/h3-9,23-24H,10H2,1-2H3

> <INCHI_KEY>
CYHVOZDYDJOISX-UHFFFAOYSA-N

> <FORMULA>
C20H17NO6

> <MOLECULAR_WEIGHT>
367.357

> <EXACT_MASS>
367.105587271

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
44

> <JCHEM_AVERAGE_POLARIZABILITY>
37.19359980968416

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
N-[6-(2,4-dihydroxy-3-methoxyphenyl)-2H-naphtho[2,3-d][1,3]dioxol-5-yl]-N-methylformamide

> <ALOGPS_LOGP>
2.55

> <JCHEM_LOGP>
2.5214572213333333

> <ALOGPS_LOGS>
-3.56

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.753723870406992

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.478407170971096

> <JCHEM_PKA_STRONGEST_BASIC>
-3.873536878769609

> <JCHEM_POLAR_SURFACE_AREA>
88.46000000000001

> <JCHEM_REFRACTIVITY>
97.32469999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.02e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
N-[6-(2,4-dihydroxy-3-methoxyphenyl)-2H-naphtho[2,3-d][1,3]dioxol-5-yl]-N-methylformamide

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 26-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   26-APR-15         0                                  
HETATM    1  C   UNK     0      -5.335  -3.080   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      -4.001  -2.310   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      -2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.667  -4.620   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      -4.001  -5.390   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0      -1.334  -5.390   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.000  -4.620   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.000  -3.080   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      -1.334  -0.770   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       8.133  -0.294   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       9.038  -1.540   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       8.133  -2.786   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   24  N   UNK     0       2.667  -4.620   0.000  0.00  0.00           N+0
HETATM   25  C   UNK     0       1.334  -5.390   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       4.001  -5.390   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       5.335  -4.620   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    9                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   11                                                  
CONECT    9    8    3   10                                                  
CONECT   10    9                                                            
CONECT   11    8   12   23                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   22                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17   20                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   16   21                                                  
CONECT   21   20   22                                                       
CONECT   22   21   14   23                                                  
CONECT   23   22   11   24                                                  
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   60    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₁₇NO₆

Average Mass

367.3570 Da

Monoisotopic Mass

367.10559 Da

IUPAC Name

N-[6-(2,4-dihydroxy-3-methoxyphenyl)-2H-naphtho[2,3-d][1,3]dioxol-5-yl]-N-methylformamide

Traditional Name

N-[6-(2,4-dihydroxy-3-methoxyphenyl)-2H-naphtho[2,3-d][1,3]dioxol-5-yl]-N-methylformamide

CAS Registry Number

Not Available

SMILES

COC1=C(O)C=CC(=C1O)C1=CC=C2C=C3OCOC3=CC2=C1N(C)C=O

InChI Identifier

InChI=1S/C20H17NO6/c1-21(9-22)18-12(13-5-6-15(23)20(25-2)19(13)24)4-3-11-7-16-17(8-14(11)18)27-10-26-16/h3-9,23-24H,10H2,1-2H3

InChI Key

CYHVOZDYDJOISX-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Zanthoxylum arnottianum	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as secobenzophenanthridine alkaloids. These are alkaloids containing a secobenzophenanthridine skeleton.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Benzophenanthridine alkaloids

Sub Class

Secobenzophenanthridine alkaloids

Direct Parent

Secobenzophenanthridine alkaloids

Alternative Parents

Substituents

Secobenzophenanthridine alkaloid skeleton
Phenylnaphthalene
Naphthalene
Methoxyphenol
Benzodioxole
Anisole
Methoxybenzene
Phenol ether
Phenoxy compound
Resorcinol
Phenol
Alkyl aryl ether
1-hydroxy-2-unsubstituted benzenoid
1-hydroxy-4-unsubstituted benzenoid
Monocyclic benzene moiety
Benzenoid
Tertiary carboxylic acid amide
Carboxamide group
Acetal
Carboxylic acid derivative
Ether
Oxacycle
Organoheterocyclic compound
Organic nitrogen compound
Hydrocarbon derivative
Carbonyl group
Organic oxide
Organic oxygen compound
Organopnictogen compound
Organonitrogen compound
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.55	ALOGPS
logP	2.52	ChemAxon
logS	-3.6	ALOGPS
pKa (Strongest Acidic)	9.48	ChemAxon
pKa (Strongest Basic)	-3.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	88.46 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	97.32 m³·mol⁻¹	ChemAxon
Polarizability	37.19 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101316791

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Iwamide (NP0066979)

MOL for NP0066979 (Iwamide)

3D MOL for NP0066979 (Iwamide)

3D SDF for NP0066979 (Iwamide)

3D-SDF for NP0066979 (Iwamide)

PDB for NP0066979 (Iwamide)

3D PDB for NP0066979 (Iwamide)

SMILES for NP0066979 (Iwamide)

INCHI for NP0066979 (Iwamide)

Structure for NP0066979 (Iwamide)

3D Structure for NP0066979 (Iwamide)