NP-MRD: Showing NP-Card for Methyl 11,12-methylenedioxychanofruticosinate (NP0066922)

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Record Information

Version

2.0

Created at

2022-04-28 11:08:42 UTC

Updated at

2022-04-28 11:08:42 UTC

NP-MRD ID

NP0066922

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Methyl 11,12-methylenedioxychanofruticosinate

Description

4,5-Dimethyl (1R,4S,15R,16R,24S)-23-oxo-8,10-dioxa-5,18-diazaheptacyclo[14.5.2.1¹,¹⁵.0⁴,¹⁵.0⁶,¹⁴.0⁷,¹¹.0¹⁸,²⁴]Tetracosa-6(14),7(11),12-triene-4,5-dicarboxylate belongs to the class of organic compounds known as aspidofractine alkaloids. These are alkaloids with a structure that is based on the hexacyclic aspidofractine core. These compounds are related to the Aspidosperma group by formation of a C-2 to C-18 bond. Methyl 11,12-methylenedioxychanofruticosinate is found in Kopsia arborea, Kopsia dasyrachis and Kopsia officinalis. Based on a literature review very few articles have been published on 4,5-dimethyl (1R,4S,15R,16R,24S)-23-oxo-8,10-dioxa-5,18-diazaheptacyclo[14.5.2.1¹,¹⁵.0⁴,¹⁵.0⁶,¹⁴.0⁷,¹¹.0¹⁸,²⁴]Tetracosa-6(14),7(11),12-triene-4,5-dicarboxylate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282213082D          

 33 39  0  0  1  0            999 V2000
    5.7411    1.4039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3549    0.8527    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1844    0.0455    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4001   -0.2104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7863    0.3408    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9568    1.1480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9568    0.0304    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.1445   -0.8065    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.9923   -0.9260    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.3559   -1.6665    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8964   -2.3517    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1790   -1.7219    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5426   -2.4624    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4975   -1.3505    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7049   -1.0721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6231   -0.2101    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0158    0.1786    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5732    0.9987    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7589    1.0620    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3591    0.3401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7901   -0.3786    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2626    1.3868    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1072    0.8382    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.7254    1.3447    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8365    2.1621    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9495    0.7492    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3722   -1.5995    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4300   -2.4225    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7993   -2.1932    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0270   -2.9861    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8994   -0.3661    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5118    0.1867    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1752    0.9400    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  7  5  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  4  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
  8 14  1  0  0  0  0
 14 15  1  0  0  0  0
 16 15  1  6  0  0  0
 16 17  1  0  0  0  0
  7 17  1  0  0  0  0
 17 18  1  6  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 16 21  1  0  0  0  0
 18 22  1  0  0  0  0
 23 22  1  1  0  0  0
  7 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 16 26  1  0  0  0  0
  8 27  1  6  0  0  0
 27 28  2  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
  3 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
  2 33  1  0  0  0  0
M  END

     RDKit          3D

 59 65  0  0  0  0  0  0  0  0999 V2000
   -3.6379   -1.5681   -3.0914 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9762   -0.7981   -2.1073 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0752   -1.3737   -1.1882 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9389   -2.6223   -1.3502 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.6645    0.8425   -0.1131 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5089    1.4188    0.4449 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5144    2.7757    0.6833 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5856    3.6015    0.4048 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6923    2.9865   -0.1427 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7389    1.6458   -0.3974 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9877    1.3128   -0.9510 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5257    2.5443   -1.4302 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9344    3.4996   -0.5448 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4383    0.2941    0.5974 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2584    0.0227   -0.6479 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1307    1.1473   -0.6487 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.1859    1.1372   -1.5807 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7681   -0.1868   -1.9323 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8950   -1.3624   -1.7241 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0374   -1.2261   -0.4618 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1610   -2.4485   -0.2887 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0495   -2.2260    0.6838 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4627   -0.8715    0.8340 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1894   -0.6518    2.1116 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3879   -0.2824    2.1151 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6062   -0.8359    3.3550 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3426   -0.6133    4.5661 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9965   -1.2474    0.7024 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3320   -0.6296    1.8608 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4300   -1.0542    2.9663 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5016    0.6003    1.5615 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4803    1.4318    0.7052 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5412   -2.6322   -2.8449 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1735   -1.3773   -4.1031 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7119   -1.2518   -3.1953 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3390    3.2784    1.1233 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5621    4.6678    0.6027 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1911    2.7676   -2.4486 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6103    2.4846   -1.3260 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6503   -0.0737   -1.5464 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0160    1.7834   -1.1839 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8478    1.6480   -2.5104 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0627   -0.1799   -3.0243 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7314   -0.3603   -1.3941 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1672   -1.5387   -2.5568 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4606   -2.2991   -1.5965 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7577   -3.3219    0.0442 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7922   -2.7063   -1.3003 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4529   -2.5269    1.7139 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7115   -3.0128    0.5180 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9657   -1.5268    4.7303 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6806   -0.4202    5.4117 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0005    0.2800    4.4394 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2217   -2.3124    0.9361 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9741   -0.7883    0.4504 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2190    1.1291    2.4687 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5480    1.1253    0.9383 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4546    2.4910    0.8965 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6 11  2  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 10  1  0
 10  9  2  0
  9  8  1  0
  8  7  2  0
 15  7  1  6
 15 32  1  0
 32 33  1  0
 33 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 21 20  1  6
 21 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  1
 25 26  2  0
 25 27  1  0
 27 28  1  0
 21 29  1  0
 29 30  1  0
 30 31  2  0
 21 16  1  0
 24  5  1  0
  7  6  1  0
 24 15  1  0
 10 11  1  0
 16 15  1  0
 30 32  1  0
 16 17  1  0
  1 34  1  0
  1 35  1  0
  1 36  1  0
 13 39  1  0
 13 40  1  0
  9 38  1  0
  8 37  1  0
 32 57  1  1
 33 58  1  0
 33 59  1  0
 18 42  1  0
 18 43  1  0
 19 44  1  0
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 20 46  1  0
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 22 48  1  0
 22 49  1  0
 23 50  1  0
 23 51  1  0
 28 52  1  0
 28 53  1  0
 28 54  1  0
 29 55  1  0
 29 56  1  0
 16 41  1  6
M  END


  Mrv1652304282213082D          

 33 39  0  0  1  0            999 V2000
    5.7411    1.4039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3549    0.8527    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1844    0.0455    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4001   -0.2104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7863    0.3408    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9568    1.1480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9568    0.0304    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.1445   -0.8065    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.9923   -0.9260    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.3559   -1.6665    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8964   -2.3517    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1790   -1.7219    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5426   -2.4624    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4975   -1.3505    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7049   -1.0721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6231   -0.2101    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0158    0.1786    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5732    0.9987    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7589    1.0620    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3591    0.3401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7901   -0.3786    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2626    1.3868    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1072    0.8382    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.7254    1.3447    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8365    2.1621    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9495    0.7492    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3722   -1.5995    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4300   -2.4225    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7993   -2.1932    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0270   -2.9861    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8994   -0.3661    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5118    0.1867    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1752    0.9400    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  7  5  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  4  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
  8 14  1  0  0  0  0
 14 15  1  0  0  0  0
 16 15  1  6  0  0  0
 16 17  1  0  0  0  0
  7 17  1  0  0  0  0
 17 18  1  6  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 16 21  1  0  0  0  0
 18 22  1  0  0  0  0
 23 22  1  1  0  0  0
  7 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 16 26  1  0  0  0  0
  8 27  1  6  0  0  0
 27 28  2  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
  3 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
  2 33  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0066922

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)N1C2=C3OCOC3=CC=C2[C@@]23[C@@H]4CN5CCC[C@@](CC[C@]12C(=O)OC)(CC4=O)[C@@H]35

> <INCHI_IDENTIFIER>
InChI=1S/C24H26N2O7/c1-30-20(28)23-8-7-22-6-3-9-25-11-14(15(27)10-22)24(23,19(22)25)13-4-5-16-18(33-12-32-16)17(13)26(23)21(29)31-2/h4-5,14,19H,3,6-12H2,1-2H3/t14-,19+,22-,23-,24+/m1/s1

> <INCHI_KEY>
SCXAALYJGIBPBC-JMSASQQJSA-N

> <FORMULA>
C24H26N2O7

> <MOLECULAR_WEIGHT>
454.479

> <EXACT_MASS>
454.174001185

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
59

> <JCHEM_AVERAGE_POLARIZABILITY>
45.79732054141404

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
4,5-dimethyl (1R,4S,15R,16R,24S)-23-oxo-8,10-dioxa-5,18-diazaheptacyclo[14.5.2.1^{1,15}.0^{4,15}.0^{6,14}.0^{7,11}.0^{18,24}]tetracosa-6,11,13-triene-4,5-dicarboxylate

> <ALOGPS_LOGP>
1.36

> <JCHEM_LOGP>
1.6467358866666666

> <ALOGPS_LOGS>
-2.26

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.995610064482111

> <JCHEM_PKA_STRONGEST_BASIC>
7.901197553445767

> <JCHEM_POLAR_SURFACE_AREA>
94.61000000000001

> <JCHEM_REFRACTIVITY>
112.75129999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.48e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4,5-dimethyl (1R,4S,15R,16R,24S)-23-oxo-8,10-dioxa-5,18-diazaheptacyclo[14.5.2.1^{1,15}.0^{4,15}.0^{6,14}.0^{7,11}.0^{18,24}]tetracosa-6,11,13-triene-4,5-dicarboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0      10.717   2.621   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      11.862   1.592   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      11.544   0.085   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      10.080  -0.393   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       8.934   0.636   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       9.253   2.143   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       7.386   0.057   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       7.736  -1.506   0.000  0.00  0.00           C+0
HETATM    9  N   UNK     0       9.319  -1.728   0.000  0.00  0.00           N+0
HETATM   10  C   UNK     0       9.998  -3.111   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       9.140  -4.390   0.000  0.00  0.00           O+0
HETATM   12  O   UNK     0      11.534  -3.214   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      12.213  -4.597   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.529  -2.521   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.049  -2.001   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.896  -0.392   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.630   0.333   0.000  0.00  0.00           C+0
HETATM   18  N   UNK     0       4.803   1.864   0.000  0.00  0.00           N+0
HETATM   19  C   UNK     0       3.283   1.982   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       2.537   0.635   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.341  -0.707   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       6.090   2.589   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       7.667   1.565   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.954   2.510   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       7.161   4.036   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       5.506   1.399   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       8.161  -2.986   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       8.269  -4.522   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       7.092  -4.094   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       7.517  -5.574   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0      12.879  -0.683   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      14.022   0.349   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0      13.394   1.755   0.000  0.00  0.00           O+0
CONECT    1    2    6                                                       
CONECT    2    1    3   33                                                  
CONECT    3    2    4   31                                                  
CONECT    4    3    5    9                                                  
CONECT    5    4    6    7                                                  
CONECT    6    5    1                                                       
CONECT    7    5    8   17   23                                             
CONECT    8    7    9   14   27                                             
CONECT    9    8    4   10                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13                                                       
CONECT   13   12                                                            
CONECT   14    8   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17   21   26                                             
CONECT   17   16    7   18                                                  
CONECT   18   17   19   22                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   16                                                       
CONECT   22   18   23                                                       
CONECT   23   22    7   24                                                  
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   16                                                       
CONECT   27    8   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   30                                                       
CONECT   30   29                                                            
CONECT   31    3   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32    2                                                       
MASTER        0    0    0    0    0    0    0    0   33    0   78    0
END

View in JSmol

Synonyms

Value	Source
4,5-Dimethyl (1R,4S,15R,16R,24S)-23-oxo-8,10-dioxa-5,18-diazaheptacyclo[14.5.2.1,.0,.0,.0,.0,]tetracosa-6(14),7(11),12-triene-4,5-dicarboxylic acid	Generator

Chemical Formula

C₂₄H₂₆N₂O₇

Average Mass

454.4790 Da

Monoisotopic Mass

454.17400 Da

IUPAC Name

4,5-dimethyl (1R,4S,15R,16R,24S)-23-oxo-8,10-dioxa-5,18-diazaheptacyclo[14.5.2.1^{1,15}.0^{4,15}.0^{6,14}.0^{7,11}.0^{18,24}]tetracosa-6,11,13-triene-4,5-dicarboxylate

Traditional Name

4,5-dimethyl (1R,4S,15R,16R,24S)-23-oxo-8,10-dioxa-5,18-diazaheptacyclo[14.5.2.1^{1,15}.0^{4,15}.0^{6,14}.0^{7,11}.0^{18,24}]tetracosa-6,11,13-triene-4,5-dicarboxylate

CAS Registry Number

Not Available

SMILES

COC(=O)N1C2=C3OCOC3=CC=C2[C@@]23[C@@H]4CN5CCC[C@@](CC[C@]12C(=O)OC)(CC4=O)[C@@H]35

InChI Identifier

InChI=1S/C24H26N2O7/c1-30-20(28)23-8-7-22-6-3-9-25-11-14(15(27)10-22)24(23,19(22)25)13-4-5-16-18(33-12-32-16)17(13)26(23)21(29)31-2/h4-5,14,19H,3,6-12H2,1-2H3/t14-,19+,22-,23-,24+/m1/s1

InChI Key

SCXAALYJGIBPBC-JMSASQQJSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Kopsia arborea	Plant	KNApSAcK
Kopsia dasyrachis	Plant	KNApSAcK
Kopsia officinalis	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as aspidofractine alkaloids. These are alkaloids with a structure that is based on the hexacyclic aspidofractine core. These compounds are related to the Aspidosperma group by formation of a C-2 to C-18 bond.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Aspidofractine alkaloids

Sub Class

Not Available

Direct Parent

Aspidofractine alkaloids

Alternative Parents

Substituents

Aspidofractine skeleton
Aspidosperma alkaloid
Alpha-amino acid ester
Carbazole
Indolecarboxylic acid
Indolecarboxylic acid derivative
Alpha-amino acid or derivatives
Quinolidine
Benzodioxole
Indole or derivatives
Indolizidine
Azepane
Aralkylamine
Benzenoid
N-alkylpyrrolidine
Piperidine
Methyl ester
Carbamic acid ester
Pyrrolidine
Tertiary amine
Ketone
Tertiary aliphatic amine
Amino acid or derivatives
Carboxylic acid ester
Acetal
Monocarboxylic acid or derivatives
Oxacycle
Organoheterocyclic compound
Carboxylic acid derivative
Azacycle
Organooxygen compound
Aldehyde
Carbonyl group
Organic oxygen compound
Organic nitrogen compound
Organopnictogen compound
Amine
Hydrocarbon derivative
Organic oxide
Organonitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.36	ALOGPS
logP	1.65	ChemAxon
logS	-2.3	ALOGPS
pKa (Strongest Acidic)	16	ChemAxon
pKa (Strongest Basic)	7.9	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	94.61 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	112.75 m³·mol⁻¹	ChemAxon
Polarizability	45.8 Å³	ChemAxon
Number of Rings	7	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

9169287

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10994092

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Methyl 11,12-methylenedioxychanofruticosinate (NP0066922)

MOL for NP0066922 (Methyl 11,12-methylenedioxychanofruticosinate)

3D MOL for NP0066922 (Methyl 11,12-methylenedioxychanofruticosinate)

3D SDF for NP0066922 (Methyl 11,12-methylenedioxychanofruticosinate)

3D-SDF for NP0066922 (Methyl 11,12-methylenedioxychanofruticosinate)

PDB for NP0066922 (Methyl 11,12-methylenedioxychanofruticosinate)

3D PDB for NP0066922 (Methyl 11,12-methylenedioxychanofruticosinate)

SMILES for NP0066922 (Methyl 11,12-methylenedioxychanofruticosinate)

INCHI for NP0066922 (Methyl 11,12-methylenedioxychanofruticosinate)

Structure for NP0066922 (Methyl 11,12-methylenedioxychanofruticosinate)

3D Structure for NP0066922 (Methyl 11,12-methylenedioxychanofruticosinate)