NP-MRD: Showing NP-Card for (-)-11-Methoxyvincamedine (NP0066706)

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Record Information

Version

2.0

Created at

2022-04-28 10:57:27 UTC

Updated at

2022-04-28 10:57:27 UTC

NP-MRD ID

NP0066706

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(-)-11-Methoxyvincamedine

Description

Methyl (1R,9S,10S,12S,13E,16S,17R,18S)-18-(acetyloxy)-13-ethylidene-5-methoxy-8-methyl-8,15-diazahexacyclo[14.2.1.0¹,⁹.0²,⁷.0¹⁰,¹⁵.0¹²,¹⁷]Nonadeca-2(7),3,5-triene-17-carboxylate belongs to the class of organic compounds known as corynanthean-type alkaloids. These are alkaloids with a structure based on the corynanthean nucleus, which is a tetracycle characterized by an indole fused to a quinolizidine. Additionally, the quinolizidine ring system is substituted to a 2-methylpropyl group and one ethyl group. (-)-11-Methoxyvincamedine is found in Alstonia pittieri and Tonduzia longifolia. Based on a literature review very few articles have been published on methyl (1R,9S,10S,12S,13E,16S,17R,18S)-18-(acetyloxy)-13-ethylidene-5-methoxy-8-methyl-8,15-diazahexacyclo[14.2.1.0¹,⁹.0²,⁷.0¹⁰,¹⁵.0¹²,¹⁷]Nonadeca-2(7),3,5-triene-17-carboxylate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282212572D          

 32 37  0  0  1  0            999 V2000
    4.1058    1.7725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1857    0.9514    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5145    0.4716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7634    0.8131    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6836    1.6342    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3548    2.1139    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8722    1.9030    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5348    1.0882    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0273    0.4442    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.6963   -0.1795    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6316    1.2029    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0634    1.9984    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.5755    2.4996    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4100    2.6495    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5084    1.7395    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2855    0.8559    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.3896    0.5566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0390    1.1945    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9084    1.0411    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4330    0.3631    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7501    1.9484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2329    1.5021    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3793    0.3749    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2642   -0.6571    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3422   -1.1046    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7450   -1.4182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7708    0.7055    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9090   -0.2095    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1269    0.1765    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3320   -0.7118    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0236    0.6880    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8044    1.0299    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  6  0  0  0
  4  9  1  0  0  0  0
  9 10  1  0  0  0  0
  8 11  1  0  0  0  0
 11 12  1  6  0  0  0
 12 13  1  0  0  0  0
 13 14  1  1  0  0  0
  7 14  1  1  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  1  0  0  0
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 18 19  2  0  0  0  0
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 18 21  1  0  0  0  0
 12 21  1  0  0  0  0
 15 22  1  0  0  0  0
  7 22  1  0  0  0  0
 22 23  1  6  0  0  0
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 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
  2 31  1  0  0  0  0
 31 32  1  0  0  0  0
M  END

     RDKit          3D

 62 67  0  0  0  0  0  0  0  0999 V2000
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   -4.2521   -2.3551   -0.5125 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1453    1.2862   -1.4365 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2049    0.7814   -1.9702 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7774    0.2840   -0.7006 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.0454   -0.3866   -0.7059 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6330   -1.3430   -1.4951 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9059   -1.8272   -1.2446 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6426   -1.3595   -0.1760 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9116   -1.8709    0.0389 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.7565   -1.4866    1.0766 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0628   -0.4021    0.6192 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7741    0.0955    0.3740 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9854    1.0822    1.0469 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1073    1.4433    2.4266 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1157    1.5763    0.0667 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3220   -0.4317    0.0394 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3198   -1.8099   -0.0996 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.1244   -4.1939    0.6847 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0838   -2.2230    2.0151 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.6350    0.4998    1.5083 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9613   -2.6180    0.2958 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8908   -3.2565   -1.0490 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8225   -1.7652   -1.2671 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8820    1.4200   -2.2164 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1091    0.0901   -2.7837 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7743    1.6706   -2.3372 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1317   -1.7798   -2.3685 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3593   -2.5949   -1.8903 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6450   -0.3967    1.2306 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8136   -1.6549    0.7282 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6273   -2.0789    1.9860 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6500   -0.0327    1.4684 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6616    0.7093    3.1280 H   0  0  0  0  0  0  0  0  0  0  0  0
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 28  9  1  0
  5  6  1  0
 17 24  1  0
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 16 17  1  0
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 31 62  1  0
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  4 37  1  0
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 22 53  1  0
 19 50  1  0
 18 49  1  0
M  END


  Mrv1652304282212572D          

 32 37  0  0  1  0            999 V2000
    4.1058    1.7725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1857    0.9514    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5145    0.4716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7634    0.8131    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6836    1.6342    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3548    2.1139    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8722    1.9030    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5348    1.0882    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0273    0.4442    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.6963   -0.1795    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6316    1.2029    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0634    1.9984    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.5755    2.4996    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
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   -2.4330    0.3631    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7501    1.9484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2329    1.5021    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3793    0.3749    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2642   -0.6571    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3422   -1.1046    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7450   -1.4182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7708    0.7055    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9090   -0.2095    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1269    0.1765    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3320   -0.7118    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0236    0.6880    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8044    1.0299    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  6  0  0  0
  4  9  1  0  0  0  0
  9 10  1  0  0  0  0
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  7 14  1  1  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
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 18 19  2  0  0  0  0
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 18 21  1  0  0  0  0
 12 21  1  0  0  0  0
 15 22  1  0  0  0  0
  7 22  1  0  0  0  0
 22 23  1  6  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 15 27  1  6  0  0  0
 27 28  2  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
  2 31  1  0  0  0  0
 31 32  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0066706

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)[C@]12[C@@H]3C[C@]4([C@@H]1OC(C)=O)[C@@H]([C@@H]1C[C@H]2\C(CN31)=C/C)N(C)C1=CC(OC)=CC=C41

> <INCHI_IDENTIFIER>
InChI=1S/C25H30N2O5/c1-6-14-12-27-19-10-17(14)25(23(29)31-5)20(27)11-24(22(25)32-13(2)28)16-8-7-15(30-4)9-18(16)26(3)21(19)24/h6-9,17,19-22H,10-12H2,1-5H3/b14-6-/t17-,19-,20-,21+,22-,24+,25+/m0/s1

> <INCHI_KEY>
CSHQJCAFJIVSSZ-RXRPDSDSSA-N

> <FORMULA>
C25H30N2O5

> <MOLECULAR_WEIGHT>
438.524

> <EXACT_MASS>
438.215472074

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
62

> <JCHEM_AVERAGE_POLARIZABILITY>
46.92076975336987

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (1R,9S,10S,12S,13E,16S,17R,18S)-18-(acetyloxy)-13-ethylidene-5-methoxy-8-methyl-8,15-diazahexacyclo[14.2.1.0^{1,9}.0^{2,7}.0^{10,15}.0^{12,17}]nonadeca-2,4,6-triene-17-carboxylate

> <ALOGPS_LOGP>
3.33

> <JCHEM_LOGP>
2.1151490930000003

> <ALOGPS_LOGS>
-2.69

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_BASIC>
7.191990887232449

> <JCHEM_POLAR_SURFACE_AREA>
68.31

> <JCHEM_REFRACTIVITY>
118.6976

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.95e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl (1R,9S,10S,12S,13E,16S,17R,18S)-18-(acetyloxy)-13-ethylidene-5-methoxy-8-methyl-8,15-diazahexacyclo[14.2.1.0^{1,9}.0^{2,7}.0^{10,15}.0^{12,17}]nonadeca-2,4,6-triene-17-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       7.664   3.309   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.813   1.776   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.560   0.880   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.158   1.518   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       5.009   3.050   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.262   3.946   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.495   3.552   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.865   2.031   0.000  0.00  0.00           C+0
HETATM    9  N   UNK     0       3.784   0.829   0.000  0.00  0.00           N+0
HETATM   10  C   UNK     0       5.033  -0.335   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.179   2.245   0.000  0.00  0.00           C+0
HETATM   12  N   UNK     0       0.118   3.730   0.000  0.00  0.00           N+0
HETATM   13  C   UNK     0       1.074   4.666   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.632   4.946   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.949   3.247   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -0.533   1.598   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       0.727   1.039   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -1.939   2.230   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -3.562   1.943   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -4.542   0.678   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.400   3.637   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       2.301   2.804   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       2.575   0.700   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       2.360  -1.227   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       0.639  -2.062   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       3.257  -2.647   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       1.439   1.317   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       1.697  -0.391   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0      -0.237   0.330   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0      -0.620  -1.329   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       9.377   1.284   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      10.835   1.922   0.000  0.00  0.00           C+0
CONECT    1    2    6                                                       
CONECT    2    1    3   31                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5    9                                                  
CONECT    5    4    6    7                                                  
CONECT    6    5    1                                                       
CONECT    7    5    8   14   22                                             
CONECT    8    7    9   11                                                  
CONECT    9    8    4   10                                                  
CONECT   10    9                                                            
CONECT   11    8   12   17                                                  
CONECT   12   11   13   21                                                  
CONECT   13   12   14   15                                                  
CONECT   14   13    7                                                       
CONECT   15   13   16   22   27                                             
CONECT   16   15   17   18                                                  
CONECT   17   16   11                                                       
CONECT   18   16   19   21                                                  
CONECT   19   18   20                                                       
CONECT   20   19                                                            
CONECT   21   18   12                                                       
CONECT   22   15    7   23                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24                                                            
CONECT   27   15   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   30                                                       
CONECT   30   29                                                            
CONECT   31    2   32                                                       
CONECT   32   31                                                            
MASTER        0    0    0    0    0    0    0    0   32    0   74    0
END

View in JSmol

Synonyms

Value	Source
Methyl (1R,9S,10S,12S,13E,16S,17R,18S)-18-(acetyloxy)-13-ethylidene-5-methoxy-8-methyl-8,15-diazahexacyclo[14.2.1.0,.0,.0,.0,]nonadeca-2(7),3,5-triene-17-carboxylic acid	Generator

Chemical Formula

C₂₅H₃₀N₂O₅

Average Mass

438.5240 Da

Monoisotopic Mass

438.21547 Da

IUPAC Name

methyl (1R,9S,10S,12S,13E,16S,17R,18S)-18-(acetyloxy)-13-ethylidene-5-methoxy-8-methyl-8,15-diazahexacyclo[14.2.1.0^{1,9}.0^{2,7}.0^{10,15}.0^{12,17}]nonadeca-2,4,6-triene-17-carboxylate

Traditional Name

methyl (1R,9S,10S,12S,13E,16S,17R,18S)-18-(acetyloxy)-13-ethylidene-5-methoxy-8-methyl-8,15-diazahexacyclo[14.2.1.0^{1,9}.0^{2,7}.0^{10,15}.0^{12,17}]nonadeca-2,4,6-triene-17-carboxylate

CAS Registry Number

Not Available

SMILES

COC(=O)[C@]12[C@@H]3C[C@]4([C@@H]1OC(C)=O)[C@@H]([C@@H]1C[C@H]2\C(CN31)=C/C)N(C)C1=CC(OC)=CC=C41

InChI Identifier

InChI=1S/C25H30N2O5/c1-6-14-12-27-19-10-17(14)25(23(29)31-5)20(27)11-24(22(25)32-13(2)28)16-8-7-15(30-4)9-18(16)26(3)21(19)24/h6-9,17,19-22H,10-12H2,1-5H3/b14-6-/t17-,19-,20-,21+,22-,24+,25+/m0/s1

InChI Key

CSHQJCAFJIVSSZ-RXRPDSDSSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Alstonia pittieri	Plant	KNApSAcK
Tonduzia longifolia	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as corynanthean-type alkaloids. These are alkaloids with a structure based on the corynanthean nucleus, which is a tetracycle characterized by an indole fused to a quinolizidine. Additionally, the quinolizidine ring system is substituted to a 2-methylpropyl group and one ethyl group.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Corynanthean-type alkaloids

Sub Class

Not Available

Direct Parent

Corynanthean-type alkaloids

Alternative Parents

Substituents

Corynanthean skeleton
Pyridoindole
Beta-carboline
Quinolizidine
Piperidinecarboxylic acid
Indole or derivatives
Dialkylarylamine
Tertiary aliphatic/aromatic amine
Quinuclidine
Anisole
Aralkylamine
Azepane
Alkyl aryl ether
Benzenoid
Piperidine
Dicarboxylic acid or derivatives
Methyl ester
Tertiary aliphatic amine
Tertiary amine
Carboxylic acid ester
Amino acid or derivatives
Azacycle
Organoheterocyclic compound
Ether
Carboxylic acid derivative
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Carbonyl group
Amine
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.33	ALOGPS
logP	2.12	ChemAxon
logS	-2.7	ALOGPS
pKa (Strongest Basic)	7.19	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	68.31 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	118.7 m³·mol⁻¹	ChemAxon
Polarizability	46.92 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163103729

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for (-)-11-Methoxyvincamedine (NP0066706)

MOL for NP0066706 ((-)-11-Methoxyvincamedine)

3D MOL for NP0066706 ((-)-11-Methoxyvincamedine)

3D SDF for NP0066706 ((-)-11-Methoxyvincamedine)

3D-SDF for NP0066706 ((-)-11-Methoxyvincamedine)

PDB for NP0066706 ((-)-11-Methoxyvincamedine)

3D PDB for NP0066706 ((-)-11-Methoxyvincamedine)

SMILES for NP0066706 ((-)-11-Methoxyvincamedine)

INCHI for NP0066706 ((-)-11-Methoxyvincamedine)

Structure for NP0066706 ((-)-11-Methoxyvincamedine)

3D Structure for NP0066706 ((-)-11-Methoxyvincamedine)