Np mrd loader

Record Information
Version2.0
Created at2022-04-28 09:07:12 UTC
Updated at2022-04-28 09:07:12 UTC
NP-MRD IDNP0064834
Secondary Accession NumbersNone
Natural Product Identification
Common Namebeta-Barbatene
DescriptionBeta-Barbatene, also known as β-barbatene, belongs to the class of organic compounds known as branched unsaturated hydrocarbons. These are hydrocarbons that contains one or more unsaturated carbon atoms, and an aliphatic branch. beta-Barbatene is found in Barbilophazia floerkei, Barbilophozia attenuata, Barbilophozia barbata, Barbilophozia floerkei, Barbilophozia hatcheri, Barbilophozia lycopodioides, Bazzania pompeana, Bazzania trilobata, Bazzania trilobata L., Callitris sulcata, Chiloscyphus polyanthos, Frullania anomala, Frullania falciloba, Frullania media, Frullania monocera, Frullania scandens, Frullania squarrosula, Frullania tamarisci, Gymnomitrion obtusum, Jungermannia truncata NEES, Lejeunea aquatica, Lepidozia fauriana, Lepidozia vitrea, Lophocolea heterophylla, Marchantia polymorpha, Marsupella aquatica, Marsupella emarginata, Metacalypogeia alternifolia, Metacalypogeia cordifolia, Meum athamanticum, Neocallitropsis pancheri, Plagiochila asplenioides, Plagiochila semidecurrens, Ptilidium ciliare, Reboulia hemisphaerica, Schusterella chevalieri, Spongiporus leucomallellus (Murril), Trichocolea tomentella, Tritomaria quinquedentata, Tritomaria quinquedentata (Huds.) and Trocholejeunea sandvicensis. beta-Barbatene was first documented in 2014 (PMID: 25251011). Based on a literature review a small amount of articles have been published on beta-Barbatene (PMID: 33210234) (PMID: 31621716) (PMID: 27790999) (PMID: 30807037).
Structure
Thumb
Synonyms
ValueSource
b-BarbateneGenerator
Β-barbateneGenerator
Chemical FormulaC15H24
Average Mass204.3570 Da
Monoisotopic Mass204.18780 Da
IUPAC Name(1R,2R,6S,7R)-1,2,6-trimethyl-8-methylidenetricyclo[5.3.1.0^{2,6}]undecane
Traditional Name(1R,2R,6S,7R)-1,2,6-trimethyl-8-methylidenetricyclo[5.3.1.0^{2,6}]undecane
CAS Registry NumberNot Available
SMILES
C[C@]12C[C@H](C(=C)CC1)[C@]1(C)CCC[C@]21C
InChI Identifier
InChI=1S/C15H24/c1-11-6-9-13(2)10-12(11)14(3)7-5-8-15(13,14)4/h12H,1,5-10H2,2-4H3/t12-,13-,14+,15-/m1/s1
InChI KeyRTONMYLSQISFQA-APIJFGDWSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Barbilophazia floerkei-
Barbilophozia attenuataPlant
Barbilophozia barbataPlant
Barbilophozia floerkeiPlant
Barbilophozia hatcheriPlant
Barbilophozia lycopodioidesPlant
Bazzania pompeanaPlant
Bazzania trilobataLOTUS Database
Bazzania trilobata L.Plant
Callitris sulcataPlant
Chiloscyphus polyanthos-
Frullania anomalaPlant
Frullania falcilobaPlant
Frullania mediaPlant
Frullania monoceraPlant
Frullania scandensPlant
Frullania squarrosulaPlant
Frullania tamarisciPlant
Gymnomitrion obtusum-
Jungermannia truncata NEESPlant
Lejeunea aquaticaLOTUS Database
Lepidozia faurianaPlant
Lepidozia vitreaPlant
Lophocolea heterophyllaLOTUS Database
Marchantia polymorphaLOTUS Database
Marsupella aquaticaPlant
Marsupella emarginataPlant
Metacalypogeia alternifoliaLOTUS Database
Metacalypogeia cordifoliaLOTUS Database
Meum athamanticumLOTUS Database
Neocallitropsis pancheriPlant
Plagiochila asplenioidesLOTUS Database
Plagiochila semidecurrensLOTUS Database
Ptilidium ciliarePlant
Reboulia hemisphaericaPlant
Schusterella chevalieri-
Spongiporus leucomallellus (Murril)-
Trichocolea tomentellaLOTUS Database
Trilophozia quinquedentataLOTUS Database
Tritomaria quinquedentata (Huds.)Plant
Trocholejeunea sandvicensisPlant
Chemical Taxonomy
Description Belongs to the class of organic compounds known as branched unsaturated hydrocarbons. These are hydrocarbons that contains one or more unsaturated carbon atoms, and an aliphatic branch.
KingdomOrganic compounds
Super ClassHydrocarbons
ClassUnsaturated hydrocarbons
Sub ClassBranched unsaturated hydrocarbons
Direct ParentBranched unsaturated hydrocarbons
Alternative Parents
Substituents
  • Branched unsaturated hydrocarbon
  • Polycyclic hydrocarbon
  • Cyclic olefin
  • Unsaturated aliphatic hydrocarbon
  • Olefin
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP5.34ALOGPS
logP4.17ChemAxon
logS-5.2ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity64.55 m³·mol⁻¹ChemAxon
Polarizability25.25 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00021886
Chemspider ID66738200
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14109421
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Abdulsalam O, Wagner K, Wirth S, Kunert M, David A, Kallenbach M, Boland W, Kothe E, Krause K: Phytohormones and volatile organic compounds, like geosmin, in the ectomycorrhiza of Tricholoma vaccinum and Norway spruce (Picea abies). Mycorrhiza. 2021 Mar;31(2):173-188. doi: 10.1007/s00572-020-01005-2. Epub 2020 Nov 18. [PubMed:33210234 ]
  2. Rinkel J, Kollner TG, Chen F, Dickschat JS: Characterisation of three terpene synthases for beta-barbatene, beta-araneosene and nephthenol from social amoebae. Chem Commun (Camb). 2019 Oct 31;55(88):13255-13258. doi: 10.1039/c9cc07681f. [PubMed:31621716 ]
  3. Chen X, Kollner TG, Jia Q, Norris A, Santhanam B, Rabe P, Dickschat JS, Shaulsky G, Gershenzon J, Chen F: Terpene synthase genes in eukaryotes beyond plants and fungi: Occurrence in social amoebae. Proc Natl Acad Sci U S A. 2016 Oct 25;113(43):12132-12137. doi: 10.1073/pnas.1610379113. Epub 2016 Oct 7. [PubMed:27790999 ]
  4. Yongabi KA, Novakovie M, Bukvicki D, Reeb C, Asakawa Y: Management of Diabetic Bacterial Foot Infections with Organic Extracts of Liverwort Marchantia debilis from Cameroon. Nat Prod Commun. 2016 Sep;11(9):1333-1336. [PubMed:30807037 ]
  5. Petek M, Rotter A, Kogovsek P, Baebler S, Mithofer A, Gruden K: Potato virus Y infection hinders potato defence response and renders plants more vulnerable to Colorado potato beetle attack. Mol Ecol. 2014 Nov;23(21):5378-91. doi: 10.1111/mec.12932. Epub 2014 Oct 9. [PubMed:25251011 ]