NP-MRD: Showing NP-Card for Artesieversin (NP0064050)

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Record Information

Version

2.0

Created at

2022-04-28 08:20:40 UTC

Updated at

2022-04-28 08:20:40 UTC

NP-MRD ID

NP0064050

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Artesieversin

Description

(1S,1'S,2S,2'S,5S,6S,6'S,9S,10'R,12R,12'R,14R,14'S)-2-hydroxy-2,6,11,14'-tetramethyl-9'-methylidene-3',8,13'-trioxaspiro[tetracyclo[10.2.1.0¹,¹⁰.0⁵,⁹]Pentadecane-14,5'-tetracyclo[8.4.0.0²,⁶.0¹²,¹⁴]Tetradecan]-10-ene-4',7-dione belongs to the class of organic compounds known as sesterterpenoids. These are terpenes composed of five consecutive isoprene units. Artesieversin is found in Artemisia sieversiana . Based on a literature review very few articles have been published on (1S,1'S,2S,2'S,5S,6S,6'S,9S,10'R,12R,12'R,14R,14'S)-2-hydroxy-2,6,11,14'-tetramethyl-9'-methylidene-3',8,13'-trioxaspiro[tetracyclo[10.2.1.0¹,¹⁰.0⁵,⁹]Pentadecane-14,5'-tetracyclo[8.4.0.0²,⁶.0¹²,¹⁴]Tetradecan]-10-ene-4',7-dione.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282210202D          

 36 43  0  0  1  0            999 V2000
    3.7252    1.5697    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.6862    2.3937    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0176    2.8771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1630    3.6891    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2229    2.6557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9005    1.8963    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2932    1.1707    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1053    1.0254    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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    2.4756   -0.1516    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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  9 10  1  0  0  0  0
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  7 12  1  0  0  0  0
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  2 32  1  6  0  0  0
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  1 34  1  6  0  0  0
 34 35  1  0  0  0  0
 33 35  1  1  0  0  0
 34 36  1  6  0  0  0
M  END

     RDKit          3D

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M  END


  Mrv1652304282210202D          

 36 43  0  0  1  0            999 V2000
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  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  6  0  0  0
  7  8  1  0  0  0  0
  1  8  1  0  0  0  0
  8  9  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 12 10  1  1  0  0  0
  7 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 12 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 21 20  1  6  0  0  0
 21 22  1  0  0  0  0
 16 22  1  0  0  0  0
 22 23  1  1  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 21 26  1  0  0  0  0
 26 27  1  1  0  0  0
 18 28  1  6  0  0  0
 18 29  1  1  0  0  0
 17 30  1  1  0  0  0
 14 30  1  6  0  0  0
 15 31  1  0  0  0  0
  2 32  1  6  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
  1 34  1  6  0  0  0
 34 35  1  0  0  0  0
 33 35  1  1  0  0  0
 34 36  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0064050

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H]1[C@@H]2CC[C@](C)(O)[C@]34C[C@H](C[C@@]33[C@@H]5CCC(=C)[C@@H]6C[C@H]7O[C@@]7(C)[C@@H]6[C@H]5OC3=O)C(C)=C4[C@H]2OC1=O

> <INCHI_IDENTIFIER>
InChI=1S/C30H38O6/c1-13-6-7-19-24(22-18(13)10-20-28(22,5)36-20)35-26(32)29(19)11-16-12-30(29)21(14(16)2)23-17(8-9-27(30,4)33)15(3)25(31)34-23/h15-20,22-24,33H,1,6-12H2,2-5H3/t15-,16-,17-,18-,19+,20+,22-,23-,24-,27-,28+,29-,30+/m0/s1

> <INCHI_KEY>
QGRCUWMDPQZUNT-YBEUKMRASA-N

> <FORMULA>
C30H38O6

> <MOLECULAR_WEIGHT>
494.628

> <EXACT_MASS>
494.266838944

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
74

> <JCHEM_AVERAGE_POLARIZABILITY>
53.502154938336396

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1S,1'S,2S,2'S,5S,6S,6'S,9S,10'R,12R,12'R,14R,14'S)-2-hydroxy-2,6,11,14'-tetramethyl-9'-methylidene-3',8,13'-trioxaspiro[tetracyclo[10.2.1.0^{1,10}.0^{5,9}]pentadecane-14,5'-tetracyclo[8.4.0.0^{2,6}.0^{12,14}]tetradecan]-10-ene-4',7-dione

> <ALOGPS_LOGP>
3.42

> <JCHEM_LOGP>
2.9187198433333315

> <ALOGPS_LOGS>
-4.60

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
8

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.455512264271565

> <JCHEM_PKA_STRONGEST_BASIC>
-3.0369589356076165

> <JCHEM_POLAR_SURFACE_AREA>
85.36

> <JCHEM_REFRACTIVITY>
130.744

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.25e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,1'S,2S,2'S,5S,6S,6'S,9S,10'R,12R,12'R,14R,14'S)-2-hydroxy-2,6,11,14'-tetramethyl-9'-methylidene-3',8,13'-trioxaspiro[tetracyclo[10.2.1.0^{1,10}.0^{5,9}]pentadecane-14,5'-tetracyclo[8.4.0.0^{2,6}.0^{12,14}]tetradecan]-10-ene-4',7-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       6.954   2.930   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       6.881   4.468   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.633   5.370   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.904   6.886   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.149   4.957   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.548   3.540   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       4.281   2.185   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.797   1.914   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       6.007   0.388   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       4.621  -0.283   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       4.350  -1.799   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       3.554   0.827   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.998  -0.685   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.660  -0.081   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.143   0.168   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.272   1.649   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.873   2.031   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.118   3.544   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.242   4.827   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.299   4.979   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.356   3.858   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -1.102   2.339   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      -2.468   1.628   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      -3.566   2.708   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      -5.085   2.454   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0      -2.879   4.086   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -3.589   5.452   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       3.541   4.133   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       2.965   4.831   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       2.745   1.402   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      -1.073  -0.777   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       8.321   5.013   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       9.285   3.811   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       8.439   2.524   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0       9.977   2.436   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0       8.191   1.004   0.000  0.00  0.00           C+0
CONECT    1    2    8   34                                                  
CONECT    2    1    3   32                                                  
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8   12                                                  
CONECT    8    7    1    9                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10    7   13   17                                             
CONECT   13   12   14                                                       
CONECT   14   13   15   30                                                  
CONECT   15   14   16   31                                                  
CONECT   16   15   17   22                                                  
CONECT   17   16   12   18   30                                             
CONECT   18   17   19   28   29                                             
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22   26                                                  
CONECT   22   21   16   23                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   21   27                                                  
CONECT   27   26                                                            
CONECT   28   18                                                            
CONECT   29   18                                                            
CONECT   30   17   14                                                       
CONECT   31   15                                                            
CONECT   32    2   33                                                       
CONECT   33   32   34   35                                                  
CONECT   34   33    1   35   36                                             
CONECT   35   34   33                                                       
CONECT   36   34                                                            
MASTER        0    0    0    0    0    0    0    0   36    0   86    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₀H₃₈O₆

Average Mass

494.6280 Da

Monoisotopic Mass

494.26684 Da

IUPAC Name

(1S,1'S,2S,2'S,5S,6S,6'S,9S,10'R,12R,12'R,14R,14'S)-2-hydroxy-2,6,11,14'-tetramethyl-9'-methylidene-3',8,13'-trioxaspiro[tetracyclo[10.2.1.0^{1,10}.0^{5,9}]pentadecane-14,5'-tetracyclo[8.4.0.0^{2,6}.0^{12,14}]tetradecan]-10-ene-4',7-dione

Traditional Name

CAS Registry Number

Not Available

SMILES

C[C@H]1[C@@H]2CC[C@](C)(O)[C@]34C[C@H](C[C@@]33[C@@H]5CCC(=C)[C@@H]6C[C@H]7O[C@@]7(C)[C@@H]6[C@H]5OC3=O)C(C)=C4[C@H]2OC1=O

InChI Identifier

InChI=1S/C30H38O6/c1-13-6-7-19-24(22-18(13)10-20-28(22,5)36-20)35-26(32)29(19)11-16-12-30(29)21(14(16)2)23-17(8-9-27(30,4)33)15(3)25(31)34-23/h15-20,22-24,33H,1,6-12H2,2-5H3/t15-,16-,17-,18-,19+,20+,22-,23-,24-,27-,28+,29-,30+/m0/s1

InChI Key

QGRCUWMDPQZUNT-YBEUKMRASA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Artemisia sieversiana	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as sesterterpenoids. These are terpenes composed of five consecutive isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesterterpenoids

Direct Parent

Sesterterpenoids

Alternative Parents

Substituents

Sesterterpenoid
Guaianolide-skeleton
Dicarboxylic acid or derivatives
Gamma butyrolactone
Oxane
Cyclic alcohol
Tertiary alcohol
Tetrahydrofuran
Lactone
Carboxylic acid ester
Oxacycle
Ether
Oxirane
Dialkyl ether
Carboxylic acid derivative
Organoheterocyclic compound
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Alcohol
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.42	ALOGPS
logP	2.92	ChemAxon
logS	-4.6	ALOGPS
pKa (Strongest Acidic)	14.46	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	85.36 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	130.74 m³·mol⁻¹	ChemAxon
Polarizability	53.5 Å³	ChemAxon
Number of Rings	8	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163027363

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Artesieversin (NP0064050)

MOL for NP0064050 (Artesieversin)

3D MOL for NP0064050 (Artesieversin)

3D SDF for NP0064050 (Artesieversin)

3D-SDF for NP0064050 (Artesieversin)

PDB for NP0064050 (Artesieversin)

3D PDB for NP0064050 (Artesieversin)

SMILES for NP0064050 (Artesieversin)

INCHI for NP0064050 (Artesieversin)

Structure for NP0064050 (Artesieversin)

3D Structure for NP0064050 (Artesieversin)