Np mrd loader

Record Information
Version2.0
Created at2022-04-28 08:04:49 UTC
Updated at2022-04-28 08:04:49 UTC
NP-MRD IDNP0063722
Secondary Accession NumbersNone
Natural Product Identification
Common NameArglabin
DescriptionArglabin belongs to the class of organic compounds known as guaianolides and derivatives. These are diterpene lactones with a structure characterized by the presence of a gamma-lactone fused to a guaiane, forming 3,6,9-trimethyl-azuleno[4,5-b]furan-2-one or a derivative. Arglabin is found in Artemisia glabella, Artemisia myriantha, Pentzia eenii and Pentzia spp.. Arglabin was first documented in 2020 (PMID: 33247707). Based on a literature review a significant number of articles have been published on arglabin (PMID: 35289014) (PMID: 34655016) (PMID: 34634203) (PMID: 34352920) (PMID: 33760142) (PMID: 33410214).
Structure
Thumb
Synonyms
ValueSource
(+)-ArglabinChEBI
1beta,10beta-Epoxyguaia-3,11(13)-dien-12,6alpha-olideChEBI
1b,10b-Epoxyguaia-3,11(13)-dien-12,6a-olideGenerator
1Β,10β-epoxyguaia-3,11(13)-dien-12,6α-olideGenerator
Chemical FormulaC15H18O3
Average Mass246.3060 Da
Monoisotopic Mass246.12559 Da
IUPAC Name(1R,3S,6S,10S,11R)-3,12-dimethyl-7-methylidene-2,9-dioxatetracyclo[9.3.0.0^{1,3}.0^{6,10}]tetradec-12-en-8-one
Traditional Name(1R,3S,6S,10S,11R)-3,12-dimethyl-7-methylidene-2,9-dioxatetracyclo[9.3.0.0^{1,3}.0^{6,10}]tetradec-12-en-8-one
CAS Registry NumberNot Available
SMILES
CC1=CC[C@]23O[C@@]2(C)CC[C@@H]2[C@H](OC(=O)C2=C)[C@@H]13
InChI Identifier
InChI=1S/C15H18O3/c1-8-4-7-15-11(8)12-10(9(2)13(16)17-12)5-6-14(15,3)18-15/h4,10-12H,2,5-7H2,1,3H3/t10-,11+,12-,14-,15+/m0/s1
InChI KeyUVJYAKBJSGRTHA-CUZKYEQNSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Artemisia glabellaPlant
Artemisia myrianthaPlant
Pentzia eeniiLOTUS Database
Pentzia spp.Plant
Chemical Taxonomy
Description Belongs to the class of organic compounds known as guaianolides and derivatives. These are diterpene lactones with a structure characterized by the presence of a gamma-lactone fused to a guaiane, forming 3,6,9-trimethyl-azuleno[4,5-b]furan-2-one or a derivative.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene lactones
Direct ParentGuaianolides and derivatives
Alternative Parents
Substituents
  • Guaianolide-skeleton
  • Sesquiterpenoid
  • Gamma butyrolactone
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Tetrahydrofuran
  • Carboxylic acid ester
  • Lactone
  • Carboxylic acid derivative
  • Dialkyl ether
  • Oxirane
  • Ether
  • Oxacycle
  • Monocarboxylic acid or derivatives
  • Organoheterocyclic compound
  • Organic oxide
  • Hydrocarbon derivative
  • Carbonyl group
  • Organooxygen compound
  • Organic oxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.76ALOGPS
logP2.17ChemAxon
logS-2.8ALOGPS
pKa (Strongest Basic)-4.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area38.83 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity66.79 m³·mol⁻¹ChemAxon
Polarizability26.83 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00020605
Chemspider ID4614428
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkArglabin
METLIN IDNot Available
PubChem Compound5574924
PDB IDNot Available
ChEBI ID73228
Good Scents IDNot Available
References
General References
  1. Yang Y, Guo L, Wang J, Li W, Zhou X, Zhang C, Han C: Arglabin regulates microglia polarization to relieve neuroinflammation in Alzheimer's disease. J Biochem Mol Toxicol. 2022 Jun;36(6):e23045. doi: 10.1002/jbt.23045. Epub 2022 Mar 15. [PubMed:35289014 ]
  2. Manayi A, Nabavi SM, Khayatkashani M, Habtemariam S, Khayat Kashani HR: Arglabin could target inflammasome-induced ARDS and cytokine storm associated with COVID-19. Mol Biol Rep. 2021 Dec;48(12):8221-8225. doi: 10.1007/s11033-021-06827-7. Epub 2021 Oct 15. [PubMed:34655016 ]
  3. Li TZ, Yang XT, Wang JP, Geng CA, Ma YB, Su LH, Zhang XM, Chen JJ: Biomimetic Synthesis of Lavandiolides H, I, and K and Artematrolide F via Diels-Alder Reaction. Org Lett. 2021 Nov 5;23(21):8380-8384. doi: 10.1021/acs.orglett.1c03120. Epub 2021 Oct 11. [PubMed:34634203 ]
  4. Erdenetsogt U, Nadmid S, Paetz C, Dahse HM, Voigt K, Gotov C, Boland W, Dagvadorj E: New Guaianolide Sesquiterpene Lactones and Other Constituents from Pyrethrum pulchrum. Planta Med. 2022 Apr;88(5):380-388. doi: 10.1055/a-1554-2866. Epub 2021 Aug 5. [PubMed:34352920 ]
  5. Zeng N, Hongbo T, Xu Y, Wu M, Wu Y: [Retracted] Anticancer activity of caffeic acid nbutyl ester against A431 skin carcinoma cell line occurs via induction of apoptosis and inhibition of the mTOR/PI3K/AKT signaling pathway. Mol Med Rep. 2021 May;23(5). pii: 372. doi: 10.3892/mmr.2021.12011. Epub 2021 Mar 24. [PubMed:33760142 ]
  6. Adekenov SM, Shamilova ST, Khabarov IA: Analysis of arglabin and its derivatives using high-performance liquid chromatography. Phytochem Anal. 2021 Sep;32(5):780-784. doi: 10.1002/pca.3023. Epub 2021 Jan 6. [PubMed:33410214 ]
  7. Adekenov S, Zhumakayeva A, Perminov V, Bekmanov B, Rakhimov K: Neoadjuvant Therapy with Drug Arglabin for Breast Cancer with Expression of H-Ras Oncoproteins. Asian Pac J Cancer Prev. 2020 Nov 1;21(11):3441-3447. doi: 10.31557/APJCP.2020.21.11.3441. [PubMed:33247707 ]
  8. Su LH, Geng CA, Li TZ, Ma YB, Huang XY, Zhang XM, Chen JJ: Artatrovirenols A and B: Two Cagelike Sesquiterpenoids from Artemisia atrovirens. J Org Chem. 2020 Nov 6;85(21):13466-13471. doi: 10.1021/acs.joc.0c01491. Epub 2020 Oct 22. [PubMed:33089682 ]
  9. Ren Z, Yu P, Li D, Li Z, Liao Y, Wang Y, Zhou B, Wang L: Single-Cell Reconstruction of Progression Trajectory Reveals Intervention Principles in Pathological Cardiac Hypertrophy. Circulation. 2020 May 26;141(21):1704-1719. doi: 10.1161/CIRCULATIONAHA.119.043053. Epub 2020 Feb 26. [PubMed:32098504 ]