| Record Information |
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| Version | 2.0 |
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| Created at | 2022-04-28 06:53:47 UTC |
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| Updated at | 2022-04-28 06:53:47 UTC |
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| NP-MRD ID | NP0062227 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | Aburamycin C |
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| Description | (2R,3R,4S,6S)-6-{[(2S,3R,4S,6R)-6-{[(2R,3R,4R,6R)-6-{[(2S,3R)-3-[(1R,3R,4R)-3,4-dihydroxy-1-methoxy-2-oxopentyl]-8,9-dihydroxy-6-{[(2R,4S,5R,6S)-5-hydroxy-4-{[(2S,4R,5R,6R)-4-hydroxy-5-methoxy-6-methyloxan-2-yl]oxy}-6-methyloxan-2-yl]oxy}-7-methyl-1-oxo-1,2,3,4-tetrahydroanthracen-2-yl]oxy}-3-hydroxy-2-methyloxan-4-yl]oxy}-3-hydroxy-2-methyloxan-4-yl]oxy}-4-hydroxy-2,4-dimethyloxan-3-yl 2-methylpropanoate belongs to the class of organic compounds known as oligosaccharides. These are carbohydrates made up of 3 to 10 monosaccharide units linked to each other through glycosidic bonds. Aburamycin C is found in Streptomyces aburaviensis sp. n. S-66. Based on a literature review very few articles have been published on (2R,3R,4S,6S)-6-{[(2S,3R,4S,6R)-6-{[(2R,3R,4R,6R)-6-{[(2S,3R)-3-[(1R,3R,4R)-3,4-dihydroxy-1-methoxy-2-oxopentyl]-8,9-dihydroxy-6-{[(2R,4S,5R,6S)-5-hydroxy-4-{[(2S,4R,5R,6R)-4-hydroxy-5-methoxy-6-methyloxan-2-yl]oxy}-6-methyloxan-2-yl]oxy}-7-methyl-1-oxo-1,2,3,4-tetrahydroanthracen-2-yl]oxy}-3-hydroxy-2-methyloxan-4-yl]oxy}-3-hydroxy-2-methyloxan-4-yl]oxy}-4-hydroxy-2,4-dimethyloxan-3-yl 2-methylpropanoate. |
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| Structure | CO[C@H]([C@H]1CC2=C(C(=O)[C@H]1O[C@@H]1C[C@@H](O[C@@H]3C[C@H](O[C@H]4C[C@](C)(O)[C@H](OC(=O)C(C)C)[C@@H](C)O4)[C@H](O)[C@H](C)O3)[C@H](O)[C@@H](C)O1)C(O)=C1C(O)=C(C)C(O[C@@H]3C[C@H](O[C@H]4C[C@@H](O)[C@@H](OC)[C@@H](C)O4)[C@H](O)[C@H](C)O3)=CC1=C2)C(=O)[C@H](O)[C@@H](C)O InChI=1S/C57H84O25/c1-21(2)56(68)82-55-28(9)76-41(20-57(55,10)69)80-36-18-39(73-25(6)48(36)64)79-35-19-40(74-26(7)47(35)63)81-54-31(53(71-12)51(67)45(61)23(4)58)14-29-13-30-15-33(22(3)44(60)42(30)49(65)43(29)50(54)66)77-38-17-34(46(62)24(5)72-38)78-37-16-32(59)52(70-11)27(8)75-37/h13,15,21,23-28,31-32,34-41,45-48,52-55,58-65,69H,14,16-20H2,1-12H3/t23-,24+,25+,26-,27-,28-,31-,32-,34+,35-,36+,37+,38-,39-,40-,41+,45-,46-,47-,48-,52+,53-,54+,55-,57+/m1/s1 |
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| Synonyms | | Value | Source |
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| (2R,3R,4S,6S)-6-{[(2S,3R,4S,6R)-6-{[(2R,3R,4R,6R)-6-{[(2S,3R)-3-[(1R,3R,4R)-3,4-dihydroxy-1-methoxy-2-oxopentyl]-8,9-dihydroxy-6-{[(2R,4S,5R,6S)-5-hydroxy-4-{[(2S,4R,5R,6R)-4-hydroxy-5-methoxy-6-methyloxan-2-yl]oxy}-6-methyloxan-2-yl]oxy}-7-methyl-1-oxo-1,2,3,4-tetrahydroanthracen-2-yl]oxy}-3-hydroxy-2-methyloxan-4-yl]oxy}-3-hydroxy-2-methyloxan-4-yl]oxy}-4-hydroxy-2,4-dimethyloxan-3-yl 2-methylpropanoic acid | Generator |
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| Chemical Formula | C57H84O25 |
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| Average Mass | 1169.2740 Da |
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| Monoisotopic Mass | 1168.53017 Da |
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| IUPAC Name | (2R,3R,4S,6S)-6-{[(2S,3R,4S,6R)-6-{[(2R,3R,4R,6R)-6-{[(2S,3R)-3-[(1R,3R,4R)-3,4-dihydroxy-1-methoxy-2-oxopentyl]-8,9-dihydroxy-6-{[(2R,4S,5R,6S)-5-hydroxy-4-{[(2S,4R,5R,6R)-4-hydroxy-5-methoxy-6-methyloxan-2-yl]oxy}-6-methyloxan-2-yl]oxy}-7-methyl-1-oxo-1,2,3,4-tetrahydroanthracen-2-yl]oxy}-3-hydroxy-2-methyloxan-4-yl]oxy}-3-hydroxy-2-methyloxan-4-yl]oxy}-4-hydroxy-2,4-dimethyloxan-3-yl 2-methylpropanoate |
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| Traditional Name | (2R,3R,4S,6S)-6-{[(2S,3R,4S,6R)-6-{[(2R,3R,4R,6R)-6-{[(2S,3R)-3-[(1R,3R,4R)-3,4-dihydroxy-1-methoxy-2-oxopentyl]-8,9-dihydroxy-6-{[(2R,4S,5R,6S)-5-hydroxy-4-{[(2S,4R,5R,6R)-4-hydroxy-5-methoxy-6-methyloxan-2-yl]oxy}-6-methyloxan-2-yl]oxy}-7-methyl-1-oxo-3,4-dihydro-2H-anthracen-2-yl]oxy}-3-hydroxy-2-methyloxan-4-yl]oxy}-3-hydroxy-2-methyloxan-4-yl]oxy}-4-hydroxy-2,4-dimethyloxan-3-yl 2-methylpropanoate |
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| CAS Registry Number | Not Available |
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| SMILES | CO[C@H]([C@H]1CC2=C(C(=O)[C@H]1O[C@@H]1C[C@@H](O[C@@H]3C[C@H](O[C@H]4C[C@](C)(O)[C@H](OC(=O)C(C)C)[C@@H](C)O4)[C@H](O)[C@H](C)O3)[C@H](O)[C@@H](C)O1)C(O)=C1C(O)=C(C)C(O[C@@H]3C[C@H](O[C@H]4C[C@@H](O)[C@@H](OC)[C@@H](C)O4)[C@H](O)[C@H](C)O3)=CC1=C2)C(=O)[C@H](O)[C@@H](C)O |
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| InChI Identifier | InChI=1S/C57H84O25/c1-21(2)56(68)82-55-28(9)76-41(20-57(55,10)69)80-36-18-39(73-25(6)48(36)64)79-35-19-40(74-26(7)47(35)63)81-54-31(53(71-12)51(67)45(61)23(4)58)14-29-13-30-15-33(22(3)44(60)42(30)49(65)43(29)50(54)66)77-38-17-34(46(62)24(5)72-38)78-37-16-32(59)52(70-11)27(8)75-37/h13,15,21,23-28,31-32,34-41,45-48,52-55,58-65,69H,14,16-20H2,1-12H3/t23-,24+,25+,26-,27-,28-,31-,32-,34+,35-,36+,37+,38-,39-,40-,41+,45-,46-,47-,48-,52+,53-,54+,55-,57+/m1/s1 |
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| InChI Key | ILLHFKQNRGTFDL-HMXVTCRBSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | | Species Name | Source | Reference |
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| Streptomyces aburaviensis sp. n. S-66 | Bacteria | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as oligosaccharides. These are carbohydrates made up of 3 to 10 monosaccharide units linked to each other through glycosidic bonds. |
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| Kingdom | Organic compounds |
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| Super Class | Organic oxygen compounds |
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| Class | Organooxygen compounds |
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| Sub Class | Carbohydrates and carbohydrate conjugates |
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| Direct Parent | Oligosaccharides |
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| Alternative Parents | |
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| Substituents | - Oligosaccharide
- Anthracene
- O-glycosyl compound
- 1-naphthol
- Glycosyl compound
- Tetralin
- Aryl alkyl ketone
- Aryl ketone
- 1-hydroxy-4-unsubstituted benzenoid
- Benzenoid
- Oxane
- Beta-hydroxy ketone
- Acyloin
- Vinylogous acid
- Tertiary alcohol
- Alpha-hydroxy ketone
- Secondary alcohol
- Ketone
- Carboxylic acid ester
- Oxacycle
- Organoheterocyclic compound
- Monocarboxylic acid or derivatives
- Ether
- Dialkyl ether
- Carboxylic acid derivative
- Acetal
- Organic oxide
- Hydrocarbon derivative
- Carbonyl group
- Alcohol
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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