| Record Information |
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| Version | 2.0 |
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| Created at | 2022-04-28 06:42:00 UTC |
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| Updated at | 2022-04-28 06:42:00 UTC |
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| NP-MRD ID | NP0062014 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | Detoxin D5 |
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| Description | (3S)-3-[(2S,3S)-1-[(2S)-2-amino-3-methylbutanoyl]-3-[(3-methylbutanoyl)oxy]pyrrolidin-2-yl]-3-{[(2R)-2-{[(2R)-1-hydroxy-2-methylbutylidene]amino}-3-phenylpropanoyl]oxy}propanoic acid belongs to the class of organic compounds known as depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids), commonly but not necessarily regularly alternating. Detoxin D5 is found in Streptomyces caespitosus. Based on a literature review very few articles have been published on (3S)-3-[(2S,3S)-1-[(2S)-2-amino-3-methylbutanoyl]-3-[(3-methylbutanoyl)oxy]pyrrolidin-2-yl]-3-{[(2R)-2-{[(2R)-1-hydroxy-2-methylbutylidene]amino}-3-phenylpropanoyl]oxy}propanoic acid. |
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| Structure | CC[C@@H](C)C(=O)N[C@H](CC1=CC=CC=C1)C(=O)O[C@@H](CC(O)=O)[C@@H]1[C@H](CCN1C(=O)[C@@H](N)C(C)C)OC(=O)CC(C)C InChI=1S/C31H47N3O8/c1-7-20(6)29(38)33-22(16-21-11-9-8-10-12-21)31(40)42-24(17-25(35)36)28-23(41-26(37)15-18(2)3)13-14-34(28)30(39)27(32)19(4)5/h8-12,18-20,22-24,27-28H,7,13-17,32H2,1-6H3,(H,33,38)(H,35,36)/t20-,22-,23+,24+,27+,28+/m1/s1 |
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| Synonyms | | Value | Source |
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| (3S)-3-[(2S,3S)-1-[(2S)-2-Amino-3-methylbutanoyl]-3-[(3-methylbutanoyl)oxy]pyrrolidin-2-yl]-3-{[(2R)-2-{[(2R)-1-hydroxy-2-methylbutylidene]amino}-3-phenylpropanoyl]oxy}propanoate | Generator |
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| Chemical Formula | C31H47N3O8 |
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| Average Mass | 589.7300 Da |
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| Monoisotopic Mass | 589.33632 Da |
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| IUPAC Name | (3S)-3-[(2S,3S)-1-[(2S)-2-amino-3-methylbutanoyl]-3-[(3-methylbutanoyl)oxy]pyrrolidin-2-yl]-3-{[(2R)-2-[(2R)-2-methylbutanamido]-3-phenylpropanoyl]oxy}propanoic acid |
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| Traditional Name | (3S)-3-[(2S,3S)-1-[(2S)-2-amino-3-methylbutanoyl]-3-[(3-methylbutanoyl)oxy]pyrrolidin-2-yl]-3-{[(2R)-2-[(2R)-2-methylbutanamido]-3-phenylpropanoyl]oxy}propanoic acid |
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| CAS Registry Number | Not Available |
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| SMILES | CC[C@@H](C)C(=O)N[C@H](CC1=CC=CC=C1)C(=O)O[C@@H](CC(O)=O)[C@@H]1[C@H](CCN1C(=O)[C@@H](N)C(C)C)OC(=O)CC(C)C |
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| InChI Identifier | InChI=1S/C31H47N3O8/c1-7-20(6)29(38)33-22(16-21-11-9-8-10-12-21)31(40)42-24(17-25(35)36)28-23(41-26(37)15-18(2)3)13-14-34(28)30(39)27(32)19(4)5/h8-12,18-20,22-24,27-28H,7,13-17,32H2,1-6H3,(H,33,38)(H,35,36)/t20-,22-,23+,24+,27+,28+/m1/s1 |
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| InChI Key | RCQVEDRTWSVZFU-TZVQLWNISA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids), commonly but not necessarily regularly alternating. |
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| Kingdom | Organic compounds |
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| Super Class | Organic acids and derivatives |
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| Class | Peptidomimetics |
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| Sub Class | Depsipeptides |
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| Direct Parent | Depsipeptides |
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| Alternative Parents | |
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| Substituents | - Depsipeptide
- Phenylalanine or derivatives
- Valine or derivatives
- N-acyl-alpha amino acid or derivatives
- Alpha-amino acid ester
- Alpha-amino acid amide
- Amphetamine or derivatives
- Alpha-amino acid or derivatives
- Tricarboxylic acid or derivatives
- N-acylpyrrolidine
- Fatty acid ester
- Fatty acyl
- Benzenoid
- Monocyclic benzene moiety
- Tertiary carboxylic acid amide
- Pyrrolidine
- Amino acid
- Carboxylic acid ester
- Carboxamide group
- Amino acid or derivatives
- Azacycle
- Organoheterocyclic compound
- Organic 1,3-dipolar compound
- Propargyl-type 1,3-dipolar organic compound
- Carboxylic acid
- Carboxylic acid derivative
- Carboximidic acid derivative
- Carboximidic acid
- Organic nitrogen compound
- Organic oxygen compound
- Organopnictogen compound
- Organic oxide
- Hydrocarbon derivative
- Primary amine
- Organooxygen compound
- Organonitrogen compound
- Primary aliphatic amine
- Carbonyl group
- Amine
- Aromatic heteromonocyclic compound
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| Molecular Framework | Aromatic heteromonocyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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