| Record Information |
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| Version | 2.0 |
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| Created at | 2022-04-28 06:03:02 UTC |
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| Updated at | 2022-04-28 06:03:02 UTC |
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| NP-MRD ID | NP0061154 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | CKD 711a |
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| Description | (2R,3S,4R,5R)-4-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6S)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(1R,2R,3S,4R,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)-7-oxabicyclo[4.1.0]Heptan-2-yl]amino}oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-2,3,5,6-tetrahydroxyhexanal belongs to the class of organic compounds known as aminocyclitol glycosides. These are organic compounds containing an amicocyclitol moiety glycosidically linked to a carbohydrate moiety. There are two major classes of aminoglycosides containing a 2-streptamine core. They are called 4,5- and 4,6-disubstituted 2-deoxystreptamines. CKD 711a is found in Streptomyces sp. CK-4416. Based on a literature review very few articles have been published on (2R,3S,4R,5R)-4-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6S)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(1R,2R,3S,4R,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)-7-oxabicyclo[4.1.0]Heptan-2-yl]amino}oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-2,3,5,6-tetrahydroxyhexanal. |
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| Structure | OC[C@@H](O)[C@@H](O[C@H]1O[C@H](CO)[C@H](O[C@H]2O[C@H](CO)[C@H](O[C@H]3O[C@H](CO)[C@H](O[C@H]4O[C@H](CO)[C@H](N[C@H]5[C@H]6O[C@@]6(CO)[C@@H](O)[C@H](O)[C@H]5O)[C@H](O)[C@H]4O)[C@@H](O)[C@H]3O)[C@@H](O)[C@H]2O)[C@@H](O)[C@H]1O)[C@@H](O)[C@@H](O)C=O InChI=1S/C37H63NO30/c39-1-8(46)16(48)27(9(47)2-40)64-34-24(56)19(51)29(11(4-42)61-34)66-36-26(58)21(53)30(13(6-44)63-36)67-35-25(57)20(52)28(12(5-43)62-35)65-33-23(55)17(49)14(10(3-41)60-33)38-15-18(50)22(54)31(59)37(7-45)32(15)68-37/h1,8-36,38,40-59H,2-7H2/t8-,9+,10+,11+,12+,13+,14-,15+,16-,17-,18-,19-,20-,21-,22+,23+,24+,25+,26+,27+,28-,29-,30-,31-,32+,33+,34+,35+,36+,37-/m0/s1 |
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| Synonyms | Not Available |
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| Chemical Formula | C37H63NO30 |
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| Average Mass | 1001.8880 Da |
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| Monoisotopic Mass | 1001.34349 Da |
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| IUPAC Name | (2R,3S,4R,5R)-4-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6S)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(1R,2R,3S,4R,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)-7-oxabicyclo[4.1.0]heptan-2-yl]amino}oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-2,3,5,6-tetrahydroxyhexanal |
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| Traditional Name | (2R,3S,4R,5R)-4-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5R,6S)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(1R,2R,3S,4R,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)-7-oxabicyclo[4.1.0]heptan-2-yl]amino}oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-2,3,5,6-tetrahydroxyhexanal |
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| CAS Registry Number | Not Available |
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| SMILES | OC[C@@H](O)[C@@H](O[C@H]1O[C@H](CO)[C@H](O[C@H]2O[C@H](CO)[C@H](O[C@H]3O[C@H](CO)[C@H](O[C@H]4O[C@H](CO)[C@H](N[C@H]5[C@H]6O[C@@]6(CO)[C@@H](O)[C@H](O)[C@H]5O)[C@H](O)[C@H]4O)[C@@H](O)[C@H]3O)[C@@H](O)[C@H]2O)[C@@H](O)[C@H]1O)[C@@H](O)[C@@H](O)C=O |
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| InChI Identifier | InChI=1S/C37H63NO30/c39-1-8(46)16(48)27(9(47)2-40)64-34-24(56)19(51)29(11(4-42)61-34)66-36-26(58)21(53)30(13(6-44)63-36)67-35-25(57)20(52)28(12(5-43)62-35)65-33-23(55)17(49)14(10(3-41)60-33)38-15-18(50)22(54)31(59)37(7-45)32(15)68-37/h1,8-36,38,40-59H,2-7H2/t8-,9+,10+,11+,12+,13+,14-,15+,16-,17-,18-,19-,20-,21-,22+,23+,24+,25+,26+,27+,28-,29-,30-,31-,32+,33+,34+,35+,36+,37-/m0/s1 |
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| InChI Key | LJGLQFIQTMOBAO-AVDZAQLMSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | | Species Name | Source | Reference |
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| Streptomyces sp. CK-4416 | Bacteria | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as aminocyclitol glycosides. These are organic compounds containing an amicocyclitol moiety glycosidically linked to a carbohydrate moiety. There are two major classes of aminoglycosides containing a 2-streptamine core. They are called 4,5- and 4,6-disubstituted 2-deoxystreptamines. |
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| Kingdom | Organic compounds |
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| Super Class | Organic oxygen compounds |
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| Class | Organooxygen compounds |
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| Sub Class | Carbohydrates and carbohydrate conjugates |
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| Direct Parent | Aminocyclitol glycosides |
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| Alternative Parents | |
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| Substituents | - Oligosaccharide
- Amino cyclitol glycoside
- Fatty acyl glycoside
- Alkyl glycoside
- O-glycosyl compound
- Glycosyl compound
- Aminocyclitol
- Aminocyclitol or derivatives
- Oxepane
- Fatty acyl
- Oxane
- Beta-hydroxy aldehyde
- Cyclitol or derivatives
- Alpha-hydroxyaldehyde
- Cyclic alcohol
- 1,3-aminoalcohol
- Secondary alcohol
- 1,2-aminoalcohol
- Oxacycle
- Organoheterocyclic compound
- Secondary amine
- Polyol
- Ether
- Oxirane
- Secondary aliphatic amine
- Dialkyl ether
- Acetal
- Organic nitrogen compound
- Organopnictogen compound
- Organic oxide
- Hydrocarbon derivative
- Primary alcohol
- Organonitrogen compound
- Carbonyl group
- Amine
- Aldehyde
- Alcohol
- Aliphatic heteropolycyclic compound
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| Molecular Framework | Aliphatic heteropolycyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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