NP-MRD: Showing NP-Card for (-)-Linderol A (NP0060650)

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Record Information

Version

2.0

Created at

2022-04-28 05:40:00 UTC

Updated at

2022-04-28 05:40:00 UTC

NP-MRD ID

NP0060650

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(-)-Linderol A

Description

(-)-Linderol a belongs to the class of organic compounds known as 2'-hydroxychalcones. These are organic compounds containing chalcone skeleton that carries a hydroxyl group at the 2'-position. Thus, (-)-linderol a is considered to be a flavonoid. (-)-Linderol A is found in Lindera umbellata . (-)-Linderol A was first documented in 2007 (PMID: 17579456). Based on a literature review a small amount of articles have been published on (-)-linderol a (PMID: 25860504) (PMID: 34062253) (PMID: 20334420).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282207402D          

 31 34  0  0  1  0            999 V2000
    3.9604    0.5840    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7054   -0.2006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8985   -0.3721    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3464    0.2410    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6014    1.0256    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4084    1.1971    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.2651    2.0096    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0018    1.7702    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9339    1.5105    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2665    1.0256    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5214    0.2410    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9694   -0.3721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1624   -0.2006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0925    0.5840    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4595    1.1971    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2046    1.9817    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7566    2.5948    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6024    2.1533    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1544    1.5402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9614    1.7117    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5134    1.0986    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3204    1.2701    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5753    2.0548    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0233    2.6679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2163    2.4963    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8995    0.7556    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2243   -1.1567    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6723   -1.7698    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6435   -1.1567    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8366   -1.3283    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5816   -2.1129    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  6  0  0  0
  6  8  1  1  0  0  0
  5  9  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
  4 11  1  1  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 10 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 20 25  1  0  0  0  0
 14 26  1  0  0  0  0
 12 27  1  0  0  0  0
 27 28  1  0  0  0  0
  3 29  1  6  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
M  END

     RDKit          3D

 61 64  0  0  0  0  0  0  0  0999 V2000
    5.3801    1.9289   -0.8790 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8605    0.5747   -0.3609 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6067    0.2992   -1.1040 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8916   -0.9699   -0.7681 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7401   -2.1926   -1.0044 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4180   -3.2960   -0.0052 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9171   -3.4974    0.0385 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3603   -3.9970   -1.2593 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6934   -4.5116    0.9983 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3030   -2.2545    0.5415 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3099   -1.6883   -0.3374 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0823   -0.4114    0.2171 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1030    0.3828    0.2355 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2891   -0.1270   -0.3934 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0406   -1.3471   -0.9132 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6208    0.2379   -0.6394 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4096    1.2345   -0.4028 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8344    1.3018   -0.8242 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4647    0.3134   -1.5093 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8156    0.4350   -1.8805 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5431    1.5537   -1.5645 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8889    2.5449   -0.8704 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5705    2.4460   -0.4985 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0091    1.5965    0.8629 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0444    2.4614    0.9636 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1766    2.0036    1.4364 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3124    1.2254    1.4099 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4797    1.7124    2.0182 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5383    2.9567    2.6502 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2420    0.0220    0.7944 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2587   -1.0448    0.5742 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.1962    1.9112   -1.9734 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4756    1.9995   -0.7413 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8242    2.7629   -0.4461 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6475   -0.1993   -0.4855 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6355    0.7463    0.7069 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9318    1.1784   -1.0576 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8641    0.2164   -2.2031 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0175   -0.9937   -1.5052 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8088   -1.9761   -0.8613 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5788   -2.6219   -2.0181 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7353   -2.9892    1.0119 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8632   -4.2520   -0.2876 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5559   -3.3282   -1.6605 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8718   -5.0003   -1.1657 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1731   -4.1405   -2.0083 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7510   -4.8385    0.9182 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8191   -2.3539    1.5307 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1963   -0.5727   -1.2200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0132    2.0691    0.1316 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9792   -0.5968   -1.8002 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3104   -0.3542   -2.4247 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5817    1.6824   -1.8326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4644    3.4278   -0.6215 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0692    3.2233    0.0421 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0694    3.3513    1.3941 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2622    2.9779    1.9435 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7676    3.0644    3.4636 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4474    3.8125    1.9355 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5194    3.0241    3.1663 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0009   -1.1232    1.3711 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  1
  7 10  1  0
 10 11  1  0
 11 12  1  0
 12 30  2  0
 30 31  1  0
 30 27  1  0
 27 28  1  0
 28 29  1  0
 27 26  2  0
 26 24  1  0
 24 25  1  0
 24 13  2  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  2  0
 31  4  1  0
 23 18  1  0
 31 10  1  0
 13 12  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  2 35  1  0
  2 36  1  0
  3 37  1  0
  3 38  1  0
  4 39  1  6
  5 40  1  0
  5 41  1  0
  6 42  1  0
  6 43  1  0
  8 44  1  0
  8 45  1  0
  8 46  1  0
  9 47  1  0
 10 48  1  1
 31 61  1  1
 29 58  1  0
 29 59  1  0
 29 60  1  0
 26 57  1  0
 25 56  1  0
 16 49  1  0
 17 50  1  0
 19 51  1  0
 20 52  1  0
 21 53  1  0
 22 54  1  0
 23 55  1  0
M  END


  Mrv1652304282207402D          

 31 34  0  0  1  0            999 V2000
    3.9604    0.5840    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7054   -0.2006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8985   -0.3721    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3464    0.2410    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6014    1.0256    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4084    1.1971    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.2651    2.0096    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0018    1.7702    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9339    1.5105    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2665    1.0256    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5214    0.2410    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9694   -0.3721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1624   -0.2006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0925    0.5840    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4595    1.1971    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2046    1.9817    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7566    2.5948    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6024    2.1533    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1544    1.5402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9614    1.7117    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5134    1.0986    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3204    1.2701    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5753    2.0548    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0233    2.6679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2163    2.4963    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8995    0.7556    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2243   -1.1567    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6723   -1.7698    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6435   -1.1567    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8366   -1.3283    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5816   -2.1129    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  6  0  0  0
  6  8  1  1  0  0  0
  5  9  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
  4 11  1  1  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 10 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 20 25  1  0  0  0  0
 14 26  1  0  0  0  0
 12 27  1  0  0  0  0
 27 28  1  0  0  0  0
  3 29  1  6  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0060650

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCC[C@H]1CC[C@@](C)(O)[C@@H]2OC3=C([C@H]12)C(OC)=CC(O)=C3C(=O)\C=C\C1=CC=CC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C26H30O5/c1-4-8-17-13-14-26(2,29)25-21(17)23-20(30-3)15-19(28)22(24(23)31-25)18(27)12-11-16-9-6-5-7-10-16/h5-7,9-12,15,17,21,25,28-29H,4,8,13-14H2,1-3H3/b12-11+/t17-,21-,25+,26+/m0/s1

> <INCHI_KEY>
XIYYPYFGGHPNHU-RCSCSQPYSA-N

> <FORMULA>
C26H30O5

> <MOLECULAR_WEIGHT>
422.521

> <EXACT_MASS>
422.209324066

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
61

> <JCHEM_AVERAGE_POLARIZABILITY>
46.95803413887652

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2E)-1-[(1S,9R,10R,13S)-5,10-dihydroxy-3-methoxy-10-methyl-13-propyl-8-oxatricyclo[7.4.0.0^{2,7}]trideca-2(7),3,5-trien-6-yl]-3-phenylprop-2-en-1-one

> <ALOGPS_LOGP>
4.81

> <JCHEM_LOGP>
5.628048458333334

> <ALOGPS_LOGS>
-5.04

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.016890328664534

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.439003186492896

> <JCHEM_PKA_STRONGEST_BASIC>
-3.2285988022239396

> <JCHEM_POLAR_SURFACE_AREA>
75.99000000000001

> <JCHEM_REFRACTIVITY>
121.05740000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
3.89e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2E)-1-[(1S,9R,10R,13S)-5,10-dihydroxy-3-methoxy-10-methyl-13-propyl-8-oxatricyclo[7.4.0.0^{2,7}]trideca-2(7),3,5-trien-6-yl]-3-phenylprop-2-en-1-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       7.393   1.090   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       6.917  -0.374   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.410  -0.695   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.380   0.450   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.856   1.914   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.362   2.235   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       6.095   3.751   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       7.470   3.304   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       3.610   2.820   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       2.364   1.914   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.840   0.450   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.810  -0.695   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.303  -0.374   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -0.173   1.090   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.858   2.235   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.382   3.699   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       1.412   4.844   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      -1.124   4.019   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -2.155   2.875   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -3.661   3.195   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -4.692   2.051   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -6.198   2.371   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -6.674   3.836   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -5.643   4.980   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -4.137   4.660   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -1.679   1.410   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       2.285  -2.159   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       1.255  -3.304   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       4.935  -2.159   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       3.428  -2.479   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       2.952  -3.944   0.000  0.00  0.00           C+0
CONECT    1    2    6                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4   29                                                  
CONECT    4    3    5   11                                                  
CONECT    5    4    6    9                                                  
CONECT    6    5    1    7    8                                             
CONECT    7    6                                                            
CONECT    8    6                                                            
CONECT    9    5   10                                                       
CONECT   10    9   11   15                                                  
CONECT   11   10    4   12                                                  
CONECT   12   11   13   27                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15   26                                                  
CONECT   15   14   10   16                                                  
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   25                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   20                                                       
CONECT   26   14                                                            
CONECT   27   12   28                                                       
CONECT   28   27                                                            
CONECT   29    3   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   68    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₆H₃₀O₅

Average Mass

422.5210 Da

Monoisotopic Mass

422.20932 Da

IUPAC Name

(2E)-1-[(1S,9R,10R,13S)-5,10-dihydroxy-3-methoxy-10-methyl-13-propyl-8-oxatricyclo[7.4.0.0^{2,7}]trideca-2(7),3,5-trien-6-yl]-3-phenylprop-2-en-1-one

Traditional Name

(2E)-1-[(1S,9R,10R,13S)-5,10-dihydroxy-3-methoxy-10-methyl-13-propyl-8-oxatricyclo[7.4.0.0^{2,7}]trideca-2(7),3,5-trien-6-yl]-3-phenylprop-2-en-1-one

CAS Registry Number

Not Available

SMILES

CCC[C@H]1CC[C@@](C)(O)[C@@H]2OC3=C([C@H]12)C(OC)=CC(O)=C3C(=O)\C=C\C1=CC=CC=C1

InChI Identifier

InChI=1S/C26H30O5/c1-4-8-17-13-14-26(2,29)25-21(17)23-20(30-3)15-19(28)22(24(23)31-25)18(27)12-11-16-9-6-5-7-10-16/h5-7,9-12,15,17,21,25,28-29H,4,8,13-14H2,1-3H3/b12-11+/t17-,21-,25+,26+/m0/s1

InChI Key

XIYYPYFGGHPNHU-RCSCSQPYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Lindera umbellata	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 2'-hydroxychalcones. These are organic compounds containing chalcone skeleton that carries a hydroxyl group at the 2'-position.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Linear 1,3-diarylpropanoids

Sub Class

Chalcones and dihydrochalcones

Direct Parent

2'-Hydroxychalcones

Alternative Parents

Substituents

2'-hydroxychalcone
Coumaran
Anisole
Styrene
Aryl ketone
1-hydroxy-2-unsubstituted benzenoid
Alkyl aryl ether
Monocyclic benzene moiety
Benzenoid
Acryloyl-group
Cyclic alcohol
Enone
Tertiary alcohol
Vinylogous acid
Alpha,beta-unsaturated ketone
Ketone
Ether
Oxacycle
Organoheterocyclic compound
Organic oxygen compound
Alcohol
Organooxygen compound
Organic oxide
Hydrocarbon derivative
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Chalcones and dihydrochalcones (LMPK12120212 )

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.81	ALOGPS
logP	5.63	ChemAxon
logS	-5	ALOGPS
pKa (Strongest Acidic)	7.44	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	75.99 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	121.06 m³·mol⁻¹	ChemAxon
Polarizability	46.96 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00014449

Chemspider ID

24845955

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

42607591

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Dethe DH, Dherange BD: Enantioselective total syntheses of (+)-hostmanin A, (-)-linderol A, (+)-methyllinderatin and structural reassignment of adunctin E. J Org Chem. 2015 May 1;80(9):4526-31. doi: 10.1021/acs.joc.5b00331. Epub 2015 Apr 17. [PubMed:25860504 ]
Matsumoto T, Kitagawa T, Imahori D, Matsuzaki A, Saito Y, Ohta T, Yoshida T, Nakayama Y, Ashihara E, Watanabe T: Linderapyrone: A Wnt signal inhibitor isolated from Lindera umbellata. Bioorg Med Chem Lett. 2021 Aug 1;45:128161. doi: 10.1016/j.bmcl.2021.128161. Epub 2021 May 29. [PubMed:34062253 ]
Delaye PO, Lameiras P, Kervarec N, Mirand C, Berber H: Improved enantioselective synthesis of (-)-linderol A: hindered rotation about aryl-Csp(3) bond. J Org Chem. 2010 Apr 16;75(8):2501-9. doi: 10.1021/jo902567y. [PubMed:20334420 ]
Yamashita M, Yadav ND, Sawaki T, Takao I, Kawasaki I, Sugimoto Y, Miyatake A, Murai K, Takahara A, Kurume A, Ohta S: Asymmetric total synthesis of (-)-Linderol A. J Org Chem. 2007 Jul 20;72(15):5697-703. doi: 10.1021/jo070682+. Epub 2007 Jun 19. [PubMed:17579456 ]

Showing NP-Card for (-)-Linderol A (NP0060650)

MOL for NP0060650 ((-)-Linderol A)

3D MOL for NP0060650 ((-)-Linderol A)

3D SDF for NP0060650 ((-)-Linderol A)

3D-SDF for NP0060650 ((-)-Linderol A)

PDB for NP0060650 ((-)-Linderol A)

3D PDB for NP0060650 ((-)-Linderol A)

SMILES for NP0060650 ((-)-Linderol A)

INCHI for NP0060650 ((-)-Linderol A)

Structure for NP0060650 ((-)-Linderol A)

3D Structure for NP0060650 ((-)-Linderol A)