NP-MRD: Showing NP-Card for 5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone (NP0057065)

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Record Information

Version

2.0

Created at

2022-04-28 02:37:12 UTC

Updated at

2022-04-28 02:37:12 UTC

NP-MRD ID

NP0057065

Secondary Accession Numbers

None

Natural Product Identification

Common Name

5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone

Description

Euchretin c belongs to the class of organic compounds known as 6-prenylated isoflavanones. These are isoflavanones featuring a C5-isoprenoid unit at the 6-position. Thus, euchretin c is considered to be a flavonoid lipid molecule. 5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone is found in Euchresta formosana, Euchresta japonica and Euchresta tubulosa. Euchretin c is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004161516012D          

 37 40  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1533004161516012D          

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 30 31  1  0  0  0  0
 16 31  2  0  0  0  0
 31 32  1  0  0  0  0
 32 33  2  0  0  0  0
 32 34  1  0  0  0  0
 14 34  1  0  0  0  0
 34 35  2  0  0  0  0
  5 35  1  0  0  0  0
 35 36  1  0  0  0  0
  2 37  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0057065

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)=CCC1=C2OC3=C(C2=CC(O)=C1O)C(=O)C1=C(O)C(CC=C(C)C)=C(O)C(CC=C(C)C)=C1O3

> <INCHI_IDENTIFIER>
InChI=1S/C30H32O7/c1-14(2)7-10-17-24(32)18(11-8-15(3)4)29-23(26(17)34)27(35)22-20-13-21(31)25(33)19(12-9-16(5)6)28(20)36-30(22)37-29/h7-9,13,31-34H,10-12H2,1-6H3

> <INCHI_KEY>
IZIAIFCTOOEOCV-UHFFFAOYSA-N

> <FORMULA>
C30H32O7

> <MOLECULAR_WEIGHT>
504.579

> <EXACT_MASS>
504.21480337

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
69

> <JCHEM_AVERAGE_POLARIZABILITY>
56.49079865544131

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
5,7,13,14-tetrahydroxy-4,6,15-tris(3-methylbut-2-en-1-yl)-2,17-dioxatetracyclo[8.7.0.0³,⁸.0¹¹,¹⁶]heptadeca-1(10),3,5,7,11,13,15-heptaen-9-one

> <ALOGPS_LOGP>
5.49

> <JCHEM_LOGP>
7.829494341000001

> <ALOGPS_LOGS>
-4.02

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
7.980140578796051

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.057030430450565

> <JCHEM_PKA_STRONGEST_BASIC>
-3.030370222297382

> <JCHEM_POLAR_SURFACE_AREA>
120.36

> <JCHEM_REFRACTIVITY>
145.5627

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.84e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
euchretin C

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 16-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   16-APR-15         0                                  
HETATM    1  C   UNK     0       2.531  -7.432   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.227  -5.923   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       3.383  -4.905   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.842  -5.397   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       5.998  -4.379   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.694  -2.869   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       4.235  -2.377   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       6.850  -1.851   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.547  -0.342   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       7.702   0.676   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       7.399   2.186   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       8.555   3.204   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.940   2.678   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       8.309  -2.343   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       9.465  -1.326   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      10.925  -1.818   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      12.267  -1.062   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      13.400  -2.105   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      14.933  -1.961   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      15.575  -0.562   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      14.683   0.694   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      15.325   2.094   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      14.434   3.350   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      16.858   2.238   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      15.824  -3.217   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      17.357  -3.073   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      15.182  -4.617   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0      16.074  -5.873   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0      13.649  -4.761   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      12.758  -3.505   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      11.228  -3.327   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      10.072  -4.345   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0      10.376  -5.855   0.000  0.00  0.00           O+0
HETATM   34  C   UNK     0       8.613  -3.853   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       7.457  -4.871   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0       7.761  -6.381   0.000  0.00  0.00           O+0
HETATM   37  C   UNK     0       0.768  -5.431   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   37                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6   35                                                  
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9   14                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11                                                            
CONECT   14    8   15   34                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17   31                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19   30                                                  
CONECT   19   18   20   25                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22                                                            
CONECT   25   19   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   30                                                       
CONECT   30   29   18   31                                                  
CONECT   31   30   16   32                                                  
CONECT   32   31   33   34                                                  
CONECT   33   32                                                            
CONECT   34   32   14   35                                                  
CONECT   35   34    5   36                                                  
CONECT   36   35                                                            
CONECT   37    2                                                            
MASTER        0    0    0    0    0    0    0    0   37    0   80    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₀H₃₂O₇

Average Mass

504.5790 Da

Monoisotopic Mass

504.21480 Da

IUPAC Name

5,7,13,14-tetrahydroxy-4,6,15-tris(3-methylbut-2-en-1-yl)-2,17-dioxatetracyclo[8.7.0.0³,⁸.0¹¹,¹⁶]heptadeca-1(10),3,5,7,11,13,15-heptaen-9-one

Traditional Name

euchretin C

CAS Registry Number

Not Available

SMILES

CC(C)=CCC1=C2OC3=C(C2=CC(O)=C1O)C(=O)C1=C(O)C(CC=C(C)C)=C(O)C(CC=C(C)C)=C1O3

InChI Identifier

InChI=1S/C30H32O7/c1-14(2)7-10-17-24(32)18(11-8-15(3)4)29-23(26(17)34)27(35)22-20-13-21(31)25(33)19(12-9-16(5)6)28(20)36-30(22)37-29/h7-9,13,31-34H,10-12H2,1-6H3

InChI Key

IZIAIFCTOOEOCV-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Euchresta formosana	Plant	KNApSAcK
Euchresta japonica	Plant	KNApSAcK
Euchresta tubulosa	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 6-prenylated isoflavanones. These are isoflavanones featuring a C5-isoprenoid unit at the 6-position.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Isoflavonoids

Sub Class

Isoflavans

Direct Parent

6-prenylated isoflavanones

Alternative Parents

Substituents

6-prenylated isoflavanone
Isoflavone
Coumaronochromene
Chromone
Coumarin
Benzopyran
1-benzopyran
Benzofuran
Furopyran
1-hydroxy-2-unsubstituted benzenoid
Phenol
Pyranone
Benzenoid
Pyran
Vinylogous acid
Furan
Heteroaromatic compound
Polyol
Organoheterocyclic compound
Oxacycle
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Other Flavonoids (LMPK12160009 )

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.49	ALOGPS
logP	7.83	ChemAxon
logS	-4	ALOGPS
pKa (Strongest Acidic)	7.06	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	120.36 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	145.56 m³·mol⁻¹	ChemAxon
Polarizability	56.49 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

44260102

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for 5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone (NP0057065)

MOL for NP0057065 (5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone)

3D MOL for NP0057065 (5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone)

3D SDF for NP0057065 (5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone)

3D-SDF for NP0057065 (5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone)

PDB for NP0057065 (5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone)

3D PDB for NP0057065 (5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone)

SMILES for NP0057065 (5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone)

INCHI for NP0057065 (5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone)

Structure for NP0057065 (5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone)

3D Structure for NP0057065 (5,7,4',5'-Tetrahydroxy-6,8,3'-triprenylcoumaronochromone)