NP-MRD: Showing NP-Card for 4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan (NP0056728)

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Record Information

Version

2.0

Created at

2022-04-28 02:24:39 UTC

Updated at

2022-04-28 02:24:39 UTC

NP-MRD ID

NP0056728

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan

Description

66446-94-4 Belongs to the class of organic compounds known as pterocarpans. These are benzo-pyrano-furano-benzene compounds, containing the 6H-[1]benzofuro[3,2-c]chromene skeleton. They are derivatives of isoflavonoids. 4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan is found in Dalbergia nitidula . Based on a literature review very few articles have been published on 66446-94-4.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282204242D          

 31 35  0  0  1  0            999 V2000
    7.0888    1.4656    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7270    2.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9040    2.2644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4428    1.5803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8046    0.8389    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6276    0.7815    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9895    0.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8125   -0.0173    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1743   -0.7587    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9973   -0.8161    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3591   -1.5575    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1821   -1.6148    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.5439   -2.3563    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3670   -2.4136    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0828   -3.0403    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7131   -1.4428    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3435    0.1548    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5205    0.2122    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1586    0.9536    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.6198    1.6377    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1117    2.2877    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3366    2.0053    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3655    1.1808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6660    0.7435    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9375    1.1306    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9085    1.9551    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6080    2.3925    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1154    2.1824    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6542    1.4983    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1623    0.8483    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9118    1.4082    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
  9 16  1  0  0  0  0
  5 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
  4 20  1  0  0  0  0
 20 21  1  6  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 19 23  1  6  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 22 27  1  0  0  0  0
 26 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 25 30  1  0  0  0  0
  1 31  1  0  0  0  0
M  END

     RDKit          3D

 59 63  0  0  0  0  0  0  0  0999 V2000
   -6.5696   -0.4021    0.7711 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2262   -0.9121    0.3263 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0879   -2.3020   -0.1363 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1725   -0.0644    0.3677 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3557    1.3272    0.8419 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0095    2.3870   -0.1307 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6030    2.5098   -0.5420 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2920    3.5561   -1.5989 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5764    1.8232   -0.0963 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1638    1.9486   -0.5187 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4250    0.6733   -1.0110 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5993    0.4522   -2.3580 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2634    1.3479   -3.3554 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1528   -0.7540   -2.7572 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5271   -1.7218   -1.8492 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3386   -1.4676   -0.4995 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7908   -0.2800   -0.0630 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6282   -0.0853    1.2877 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4489   -0.6711    2.2736 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2890   -1.7876    1.7604 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6197   -1.3325    1.2666 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5085   -0.3505    1.5951 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7015   -0.1819    0.9188 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9787   -1.0476   -0.1177 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1104   -2.0561   -0.4866 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9371   -2.1768    0.2222 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9098   -3.1071    0.0406 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7253   -2.4624    0.5409 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.2179   -0.7339   -0.6861 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8051    0.2256    0.1659 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7761    0.6910    1.0104 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9153    0.4235    0.0961 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5553   -0.0983    1.8219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3166   -1.2169    0.6655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1388   -2.3093   -1.2420 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9384   -2.9053    0.2421 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1700   -2.8027    0.2243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2437   -0.4738    0.0355 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4570    1.4482    1.0697 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8786    1.4751    1.8438 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4133    3.3785    0.2396 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6126    2.1966   -1.0506 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4208    4.1045   -1.2497 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2595    3.1387   -2.6039 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1290    4.3192   -1.6245 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7766    1.0865    0.7016 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4492    2.2168    0.3957 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0432    2.7537   -1.2316 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1390    2.2537   -3.1818 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3223   -1.0034   -3.8054 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9654   -2.6803   -2.1502 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8225   -1.0463    3.1209 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1516    0.0820    2.7271 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4868   -2.5463    2.5313 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2656    0.3139    2.4119 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3600   -2.7223   -1.3084 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9409   -3.1918    0.7532 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2231    1.0192   -0.4760 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6375   -0.2584    0.7070 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  2  0
  9 10  1  0
 10 11  1  0
 11 17  2  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 28  1  0
 28 27  1  0
 27 26  1  0
 26 21  2  0
 21 22  1  0
 22 23  2  0
 23 31  1  0
 31 30  1  0
 30 29  1  0
 29 24  1  0
 24 25  2  0
 28 16  1  0
 16 15  2  0
 15 14  1  0
 14 12  2  0
 12 13  1  0
 12 11  1  0
 16 17  1  0
 21 20  1  0
 24 23  1  0
 25 26  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  3 35  1  0
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  4 38  1  0
  5 39  1  0
  5 40  1  0
  6 41  1  0
  6 42  1  0
  8 43  1  0
  8 44  1  0
  8 45  1  0
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 10 47  1  0
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 19 52  1  0
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 20 54  1  1
 28 57  1  1
 22 55  1  0
 30 58  1  0
 30 59  1  0
 25 56  1  0
 15 51  1  0
 14 50  1  0
 13 49  1  0
M  END


  Mrv1652304282204242D          

 31 35  0  0  1  0            999 V2000
    7.0888    1.4656    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7270    2.2070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9040    2.2644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4428    1.5803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8046    0.8389    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6276    0.7815    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9895    0.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8125   -0.0173    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1743   -0.7587    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9973   -0.8161    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3591   -1.5575    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1821   -1.6148    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.5439   -2.3563    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3670   -2.4136    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0828   -3.0403    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7131   -1.4428    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3435    0.1548    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5205    0.2122    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1586    0.9536    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.6198    1.6377    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1117    2.2877    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3366    2.0053    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3655    1.1808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6660    0.7435    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9375    1.1306    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9085    1.9551    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6080    2.3925    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1154    2.1824    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6542    1.4983    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1623    0.8483    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9118    1.4082    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
  9 16  1  0  0  0  0
  5 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
  4 20  1  0  0  0  0
 20 21  1  6  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 19 23  1  6  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 22 27  1  0  0  0  0
 26 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 25 30  1  0  0  0  0
  1 31  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0056728

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)=CCC\C(C)=C\CC1=C2OC[C@H]3[C@H](OC4=C3C=C3OCOC3=C4)C2=CC=C1O

> <INCHI_IDENTIFIER>
InChI=1S/C26H28O5/c1-15(2)5-4-6-16(3)7-8-17-21(27)10-9-18-25(17)28-13-20-19-11-23-24(30-14-29-23)12-22(19)31-26(18)20/h5,7,9-12,20,26-27H,4,6,8,13-14H2,1-3H3/b16-7+/t20-,26-/m1/s1

> <INCHI_KEY>
MNVKKIZBXXYHDP-MWZUCSFSSA-N

> <FORMULA>
C26H28O5

> <MOLECULAR_WEIGHT>
420.505

> <EXACT_MASS>
420.193674002

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
59

> <JCHEM_AVERAGE_POLARIZABILITY>
46.67531424288422

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1S,12S)-17-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-5,7,11,19-tetraoxapentacyclo[10.8.0.0^{2,10}.0^{4,8}.0^{13,18}]icosa-2(10),3,8,13,15,17-hexaen-16-ol

> <ALOGPS_LOGP>
4.61

> <JCHEM_LOGP>
5.678409404

> <ALOGPS_LOGS>
-5.20

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.22410115737359

> <JCHEM_PKA_STRONGEST_BASIC>
-4.355353488590169

> <JCHEM_POLAR_SURFACE_AREA>
57.150000000000006

> <JCHEM_REFRACTIVITY>
120.4102

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.63e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,12S)-17-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-5,7,11,19-tetraoxapentacyclo[10.8.0.0^{2,10}.0^{4,8}.0^{13,18}]icosa-2(10),3,8,13,15,17-hexaen-16-ol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0      13.232   2.736   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      12.557   4.120   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      11.021   4.227   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      10.160   2.950   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      10.835   1.566   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      12.372   1.459   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      13.047   0.075   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      14.583  -0.032   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      15.259  -1.416   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      16.795  -1.523   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      17.470  -2.907   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      19.007  -3.014   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      19.682  -4.398   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      21.218  -4.505   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      18.821  -5.675   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      14.398  -2.693   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       9.974   0.289   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       8.438   0.396   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       7.763   1.780   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       8.624   3.057   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       7.675   4.270   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       6.228   3.743   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       6.282   2.204   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       4.977   1.388   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       3.617   2.111   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       3.563   3.650   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       4.868   4.466   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       2.082   4.074   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       1.221   2.797   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       2.170   1.583   0.000  0.00  0.00           O+0
HETATM   31  O   UNK     0      14.769   2.629   0.000  0.00  0.00           O+0
CONECT    1    2    6   31                                                  
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5   20                                                  
CONECT    5    4    6   17                                                  
CONECT    6    5    1    7                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   16                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16    9                                                            
CONECT   17    5   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   23                                                  
CONECT   20   19    4   21                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23   27                                                  
CONECT   23   22   19   24                                                  
CONECT   24   23   25                                                       
CONECT   25   24   26   30                                                  
CONECT   26   25   27   28                                                  
CONECT   27   26   22                                                       
CONECT   28   26   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   25                                                       
CONECT   31    1                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   70    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₆H₂₈O₅

Average Mass

420.5050 Da

Monoisotopic Mass

420.19367 Da

IUPAC Name

(1S,12S)-17-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-5,7,11,19-tetraoxapentacyclo[10.8.0.0^{2,10}.0^{4,8}.0^{13,18}]icosa-2(10),3,8,13,15,17-hexaen-16-ol

Traditional Name

(1S,12S)-17-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-5,7,11,19-tetraoxapentacyclo[10.8.0.0^{2,10}.0^{4,8}.0^{13,18}]icosa-2(10),3,8,13,15,17-hexaen-16-ol

CAS Registry Number

Not Available

SMILES

CC(C)=CCC\C(C)=C\CC1=C2OC[C@H]3[C@H](OC4=C3C=C3OCOC3=C4)C2=CC=C1O

InChI Identifier

InChI=1S/C26H28O5/c1-15(2)5-4-6-16(3)7-8-17-21(27)10-9-18-25(17)28-13-20-19-11-23-24(30-14-29-23)12-22(19)31-26(18)20/h5,7,9-12,20,26-27H,4,6,8,13-14H2,1-3H3/b16-7+/t20-,26-/m1/s1

InChI Key

MNVKKIZBXXYHDP-MWZUCSFSSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Dalbergia nitidula	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as pterocarpans. These are benzo-pyrano-furano-benzene compounds, containing the 6H-[1]benzofuro[3,2-c]chromene skeleton. They are derivatives of isoflavonoids.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Isoflavonoids

Sub Class

Furanoisoflavonoids

Direct Parent

Pterocarpans

Alternative Parents

Substituents

Isoflavanol
Pterocarpan
Isoflavan
Aromatic monoterpenoid
Chromane
Benzopyran
Monoterpenoid
1-benzopyran
Benzodioxole
Benzofuran
Coumaran
Alkyl aryl ether
1-hydroxy-2-unsubstituted benzenoid
Benzenoid
Oxacycle
Ether
Acetal
Organoheterocyclic compound
Hydrocarbon derivative
Organic oxygen compound
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.61	ALOGPS
logP	5.68	ChemAxon
logS	-5.2	ALOGPS
pKa (Strongest Acidic)	9.22	ChemAxon
pKa (Strongest Basic)	-4.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	57.15 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	120.41 m³·mol⁻¹	ChemAxon
Polarizability	46.68 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00009673

Chemspider ID

20124931

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

21161133

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for 4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan (NP0056728)

MOL for NP0056728 (4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan)

3D MOL for NP0056728 (4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan)

3D SDF for NP0056728 (4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan)

3D-SDF for NP0056728 (4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan)

PDB for NP0056728 (4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan)

3D PDB for NP0056728 (4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan)

SMILES for NP0056728 (4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan)

INCHI for NP0056728 (4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan)

Structure for NP0056728 (4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan)

3D Structure for NP0056728 (4-Geranyl-3-hydroxy-8,9-methylenedioxypterocarpan)