NP-MRD: Showing NP-Card for 6,12a-Dihydroxysumatrol (NP0056665)

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Record Information

Version

2.0

Created at

2022-04-28 02:21:43 UTC

Updated at

2022-04-28 02:21:43 UTC

NP-MRD ID

NP0056665

Secondary Accession Numbers

None

Natural Product Identification

Common Name

6,12a-Dihydroxysumatrol

Description

(1R,6S,13S,21R)-10,13,21-trihydroxy-16,17-dimethoxy-6-(prop-1-en-2-yl)-2,7,20-trioxapentacyclo[11.8.0.0³,¹¹.0⁴,⁸.0¹⁴,¹⁹]Henicosa-3(11),4(8),9,14,16,18-hexaen-12-one belongs to the class of organic compounds known as rotenones. These are rotenoids with a structure based on a 6a,12a-dihydrochromeno[3,4-b]chromen-12(6H)-one skeleton. 6,12a-Dihydroxysumatrol is found in Tephrosia villosa . Based on a literature review very few articles have been published on (1R,6S,13S,21R)-10,13,21-trihydroxy-16,17-dimethoxy-6-(prop-1-en-2-yl)-2,7,20-trioxapentacyclo[11.8.0.0³,¹¹.0⁴,⁸.0¹⁴,¹⁹]Henicosa-3(11),4(8),9,14,16,18-hexaen-12-one.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652304282204212D          

 32 36  0  0  1  0            999 V2000
    5.2623   -0.2329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8607   -0.9535    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0358   -0.9661    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6125   -0.2580    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0141    0.4627    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8390    0.4752    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3816    1.0967    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1403    0.7726    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.0666   -0.0491    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8484    1.1959    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5691    0.7943    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8359    2.0208    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5908    1.1708    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7659    1.1583    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3643    0.4376    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7876   -0.2705    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3860   -0.9912    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5394    0.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1378   -0.2956    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3129   -0.3082    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1104    0.4000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2912    1.1206    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1161    1.1332    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5176    1.8538    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3425    1.8664    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.7441    2.5870    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9353    0.3874    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3369   -0.3333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0887   -1.0288    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9136   -1.0414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9627   -0.2831    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6342   -1.6868    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  1  9  1  0  0  0  0
  8 10  1  1  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
  5 13  1  0  0  0  0
 14 13  1  6  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
  4 16  1  0  0  0  0
 16 17  2  0  0  0  0
 15 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 18 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 14 25  1  0  0  0  0
 25 26  1  1  0  0  0
 21 27  1  0  0  0  0
 27 28  1  0  0  0  0
 20 29  1  0  0  0  0
 29 30  1  0  0  0  0
 15 31  1  1  0  0  0
  3 32  1  0  0  0  0
M  END

     RDKit          3D

 54 58  0  0  0  0  0  0  0  0999 V2000
   -6.8735   -1.1647   -0.3259 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5742    0.0961   -0.5347 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6990    1.0762   -0.6530 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2132    0.6021   -0.6707 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.1324   -0.4496   -0.4944 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9179    0.3590   -0.1154 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4126    1.5462    0.3973 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5693    2.5390    0.8492 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1697    2.3578    0.7957 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3383    3.3503    1.2506 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7182    1.1738    0.2830 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5659    0.1631   -0.1770 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0142   -0.9784   -0.6709 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3390   -1.3268   -0.6465 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.9691   -1.2014   -2.0268 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.1930   -1.8063   -2.9924 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2688   -1.7775   -1.9612 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1264   -1.2628   -1.0023 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5028   -1.3237   -1.1042 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3393   -0.8045   -0.1373 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7135   -0.8651   -0.2387 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.4210   -1.4403   -1.2974 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8117   -0.1940    0.9883 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6422    0.3400    1.9826 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0235    0.9474    3.1014 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4380   -0.1344    1.0878 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5911   -0.6571    0.1143 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1418   -0.5257    0.3472 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8435   -0.9502    1.6178 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7198    0.9048    0.1868 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5248    1.8335   -0.0188 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8244    1.5191    0.3595 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1157   -1.9374   -0.2380 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9333   -1.4570   -0.2353 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3842    2.1063   -0.3926 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4865    0.7535    0.0546 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1277    1.0938   -1.6571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0599    1.0991   -1.6755 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4048   -1.1147    0.3525 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9948   -1.0395   -1.3965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9088    3.4804    1.2564 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6363    3.2901    1.2661 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4196   -2.3947   -0.3567 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1134   -0.1318   -2.2841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6995   -1.3821   -2.9625 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9061   -1.8031   -1.9880 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1578   -2.5159   -1.4567 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5023   -1.4315   -1.0175 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3146   -0.8364   -2.2073 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7422    1.4760    3.7449 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3989    0.2292    3.6729 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3014    1.7414    2.7496 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0203    0.3515    1.9836 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0159   -1.5231    1.6553 H   0  0  0  0  0  0  0  0  0  0  0  0
 22 21  1  0
 21 20  1  0
 20 23  2  0
 23 24  1  0
 24 25  1  0
 23 26  1  0
 26 27  2  0
 27 18  1  0
 18 17  1  0
 17 15  1  0
 15 16  1  0
 15 14  1  0
 14 13  1  0
 13 12  1  0
 12  6  2  0
  6  5  1  0
  5  4  1  0
  4 32  1  0
 32  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
  9 11  2  0
 11 30  1  0
 30 31  2  0
 30 28  1  0
 28 29  1  1
  4  2  1  0
  2  3  1  0
  2  1  2  3
 18 19  2  0
 19 20  1  0
 28 27  1  0
 28 14  1  0
 11 12  1  0
  7  6  1  0
 22 47  1  0
 22 48  1  0
 22 49  1  0
 25 50  1  0
 25 51  1  0
 25 52  1  0
 26 53  1  0
 15 44  1  6
 16 45  1  0
 14 43  1  1
  5 39  1  0
  5 40  1  0
  4 38  1  6
  8 41  1  0
 10 42  1  0
 29 54  1  0
  3 35  1  0
  3 36  1  0
  3 37  1  0
  1 33  1  0
  1 34  1  0
 19 46  1  0
M  END


  Mrv1652304282204212D          

 32 36  0  0  1  0            999 V2000
    5.2623   -0.2329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8607   -0.9535    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0358   -0.9661    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6125   -0.2580    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0141    0.4627    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8390    0.4752    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3816    1.0967    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1403    0.7726    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.0666   -0.0491    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8484    1.1959    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5691    0.7943    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8359    2.0208    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5908    1.1708    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7659    1.1583    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3643    0.4376    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7876   -0.2705    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3860   -0.9912    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5394    0.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1378   -0.2956    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3129   -0.3082    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1104    0.4000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2912    1.1206    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1161    1.1332    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5176    1.8538    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3425    1.8664    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.7441    2.5870    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9353    0.3874    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3369   -0.3333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0887   -1.0288    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9136   -1.0414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9627   -0.2831    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6342   -1.6868    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  1  9  1  0  0  0  0
  8 10  1  1  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
  5 13  1  0  0  0  0
 14 13  1  6  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
  4 16  1  0  0  0  0
 16 17  2  0  0  0  0
 15 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 18 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 14 25  1  0  0  0  0
 25 26  1  1  0  0  0
 21 27  1  0  0  0  0
 27 28  1  0  0  0  0
 20 29  1  0  0  0  0
 29 30  1  0  0  0  0
 15 31  1  1  0  0  0
  3 32  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0056665

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=C(OC)C=C2C(O[C@@H](O)[C@@H]3OC4=C5C[C@H](OC5=CC(O)=C4C(=O)[C@]23O)C(C)=C)=C1

> <INCHI_IDENTIFIER>
InChI=1S/C23H22O9/c1-9(2)13-5-10-14(30-13)7-12(24)18-19(10)32-21-22(26)31-15-8-17(29-4)16(28-3)6-11(15)23(21,27)20(18)25/h6-8,13,21-22,24,26-27H,1,5H2,2-4H3/t13-,21-,22+,23+/m0/s1

> <INCHI_KEY>
CDZUQIFWCXAIFB-FVGIQXBDSA-N

> <FORMULA>
C23H22O9

> <MOLECULAR_WEIGHT>
442.42

> <EXACT_MASS>
442.126382288

> <JCHEM_ACCEPTOR_COUNT>
9

> <JCHEM_ATOM_COUNT>
54

> <JCHEM_AVERAGE_POLARIZABILITY>
44.56019486828834

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,6S,13S,21R)-10,13,21-trihydroxy-16,17-dimethoxy-6-(prop-1-en-2-yl)-2,7,20-trioxapentacyclo[11.8.0.0^{3,11}.0^{4,8}.0^{14,19}]henicosa-3,8,10,14,16,18-hexaen-12-one

> <ALOGPS_LOGP>
2.03

> <JCHEM_LOGP>
2.7108708880000005

> <ALOGPS_LOGS>
-2.93

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.756494316186352

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.827907737394012

> <JCHEM_PKA_STRONGEST_BASIC>
-4.238558489559176

> <JCHEM_POLAR_SURFACE_AREA>
123.91000000000003

> <JCHEM_REFRACTIVITY>
109.96909999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
5.15e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,6S,13S,21R)-10,13,21-trihydroxy-16,17-dimethoxy-6-(prop-1-en-2-yl)-2,7,20-trioxapentacyclo[11.8.0.0^{3,11}.0^{4,8}.0^{14,19}]henicosa-3,8,10,14,16,18-hexaen-12-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       9.823  -0.435   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       9.073  -1.780   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       7.534  -1.803   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.743  -0.482   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       7.493   0.864   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       9.033   0.887   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      10.046   2.047   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      11.462   1.442   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0      11.324  -0.092   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      12.784   2.232   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      14.129   1.483   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      12.760   3.772   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       6.703   2.185   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       5.163   2.162   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.413   0.817   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.204  -0.505   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       4.454  -1.850   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       2.874   0.793   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.124  -0.552   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.584  -0.575   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -0.206   0.747   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       0.543   2.092   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.083   2.115   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       2.833   3.460   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       4.373   3.484   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       5.122   4.829   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0      -1.746   0.723   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      -2.496  -0.622   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0      -0.166  -1.920   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0      -1.705  -1.944   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       3.664  -0.528   0.000  0.00  0.00           O+0
HETATM   32  O   UNK     0       6.784  -3.149   0.000  0.00  0.00           O+0
CONECT    1    2    6    9                                                  
CONECT    2    1    3                                                       
CONECT    3    2    4   32                                                  
CONECT    4    3    5   16                                                  
CONECT    5    4    6   13                                                  
CONECT    6    5    1    7                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8    1                                                       
CONECT   10    8   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10                                                            
CONECT   13    5   14                                                       
CONECT   14   13   15   25                                                  
CONECT   15   14   16   18   31                                             
CONECT   16   15    4   17                                                  
CONECT   17   16                                                            
CONECT   18   15   19   23                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21   29                                                  
CONECT   21   20   22   27                                                  
CONECT   22   21   23                                                       
CONECT   23   22   18   24                                                  
CONECT   24   23   25                                                       
CONECT   25   24   14   26                                                  
CONECT   26   25                                                            
CONECT   27   21   28                                                       
CONECT   28   27                                                            
CONECT   29   20   30                                                       
CONECT   30   29                                                            
CONECT   31   15                                                            
CONECT   32    3                                                            
MASTER        0    0    0    0    0    0    0    0   32    0   72    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₃H₂₂O₉

Average Mass

442.4200 Da

Monoisotopic Mass

442.12638 Da

IUPAC Name

(1R,6S,13S,21R)-10,13,21-trihydroxy-16,17-dimethoxy-6-(prop-1-en-2-yl)-2,7,20-trioxapentacyclo[11.8.0.0^{3,11}.0^{4,8}.0^{14,19}]henicosa-3,8,10,14,16,18-hexaen-12-one

Traditional Name

(1R,6S,13S,21R)-10,13,21-trihydroxy-16,17-dimethoxy-6-(prop-1-en-2-yl)-2,7,20-trioxapentacyclo[11.8.0.0^{3,11}.0^{4,8}.0^{14,19}]henicosa-3,8,10,14,16,18-hexaen-12-one

CAS Registry Number

Not Available

SMILES

COC1=C(OC)C=C2C(O[C@@H](O)[C@@H]3OC4=C5C[C@H](OC5=CC(O)=C4C(=O)[C@]23O)C(C)=C)=C1

InChI Identifier

InChI=1S/C23H22O9/c1-9(2)13-5-10-14(30-13)7-12(24)18-19(10)32-21-22(26)31-15-8-17(29-4)16(28-3)6-11(15)23(21,27)20(18)25/h6-8,13,21-22,24,26-27H,1,5H2,2-4H3/t13-,21-,22+,23+/m0/s1

InChI Key

CDZUQIFWCXAIFB-FVGIQXBDSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Tephrosia villosa	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as rotenones. These are rotenoids with a structure based on a 6a,12a-dihydrochromeno[3,4-b]chromen-12(6H)-one skeleton.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Isoflavonoids

Sub Class

Rotenoids

Direct Parent

Rotenones

Alternative Parents

Substituents

8-prenylated isoflavanone
Rotenone or derivatives
Isoflavanone
Isoflavan
Chromone
1-benzopyran
Benzopyran
Chromane
Coumaran
Aryl alkyl ketone
Aryl ketone
Anisole
1-hydroxy-2-unsubstituted benzenoid
Alkyl aryl ether
Benzenoid
Vinylogous acid
Tertiary alcohol
Ketone
Hemiacetal
Oxacycle
Organoheterocyclic compound
Polyol
Ether
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.03	ALOGPS
logP	2.71	ChemAxon
logS	-2.9	ALOGPS
pKa (Strongest Acidic)	8.83	ChemAxon
pKa (Strongest Basic)	-4.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	9	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	123.91 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	109.97 m³·mol⁻¹	ChemAxon
Polarizability	44.56 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

154497668

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for 6,12a-Dihydroxysumatrol (NP0056665)

MOL for NP0056665 (6,12a-Dihydroxysumatrol)

3D MOL for NP0056665 (6,12a-Dihydroxysumatrol)

3D SDF for NP0056665 (6,12a-Dihydroxysumatrol)

3D-SDF for NP0056665 (6,12a-Dihydroxysumatrol)

PDB for NP0056665 (6,12a-Dihydroxysumatrol)

3D PDB for NP0056665 (6,12a-Dihydroxysumatrol)

SMILES for NP0056665 (6,12a-Dihydroxysumatrol)

INCHI for NP0056665 (6,12a-Dihydroxysumatrol)

Structure for NP0056665 (6,12a-Dihydroxysumatrol)

3D Structure for NP0056665 (6,12a-Dihydroxysumatrol)