NP-MRD: Showing NP-Card for 7-Methoxy-3',4'-methylenedioxyisoflavone (NP0056497)

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Record Information

Version

2.0

Created at

2022-04-28 02:16:00 UTC

Updated at

2022-04-28 02:16:00 UTC

NP-MRD ID

NP0056497

Secondary Accession Numbers

None

Natural Product Identification

Common Name

7-Methoxy-3',4'-methylenedioxyisoflavone

Description

Pseudobaptigenin methyl ether belongs to the class of organic compounds known as 7-o-methylisoflavones. These are isoflavones with methoxy groups attached to the C7 atom of the isoflavone backbone. Thus, pseudobaptigenin methyl ether is considered to be a flavonoid lipid molecule. 7-Methoxy-3',4'-methylenedioxyisoflavone is found in Ateleia herbert-smithii, Calopogonium mucunoides and Sophora japonica . Pseudobaptigenin methyl ether is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 34 37  0  0  0  0  0  0  0  0999 V2000
   -6.7061    0.0311    0.1032 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6649    0.9438   -0.0757 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3448    0.5322    0.0485 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0409   -0.7793    0.3494 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7103   -1.1391    0.4623 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6917   -0.2074    0.2785 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3616   -0.5701    0.3920 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0320   -1.7415    0.6622 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6421    0.3623    0.2077 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0492   -0.0028    0.3237 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4822   -0.7895    1.3756 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8106   -1.1420    1.4968 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7592   -0.7226    0.5722 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3326    0.0622   -0.4788 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0077    0.4040   -0.5850 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4751    0.3232   -1.2247 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6202    0.0066   -0.4741 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1425   -0.9361    0.4671 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2477    1.6500   -0.0901 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0167    1.9842   -0.1956 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9881    1.1070   -0.0229 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3156    1.4473   -0.1313 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8224   -0.2254    1.1814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6303    0.4898   -0.3005 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4983   -0.8672   -0.4966 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8309   -1.5028    0.4921 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4252   -2.1625    0.6983 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7340   -1.1184    2.1021 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1461   -1.7571    2.3202 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6983    1.0174   -1.4139 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0668    0.8873    0.0356 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3466   -0.4616   -1.1864 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0476    2.3892   -0.2361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5288    2.4878   -0.3694 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  7  9  1  0
  9 19  2  0
 19 20  1  0
 20 21  1  0
 21 22  2  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 18  1  0
 18 17  1  0
 17 16  1  0
 16 14  1  0
 14 15  2  0
 22  3  1  0
 15 10  1  0
 21  6  1  0
 14 13  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  4 26  1  0
  5 27  1  0
 19 33  1  0
 22 34  1  0
 11 28  1  0
 12 29  1  0
 17 31  1  0
 17 32  1  0
 15 30  1  0
M  END


  Mrv1533004241506462D          

 22 25  0  0  0  0            999 V2000
    4.2135    5.6479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2135    4.8229    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4990    4.4104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4990    3.5854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7845    3.1729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0701    3.5854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3556    3.1729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3556    2.3479    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6411    3.5854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6411    4.4104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3556    4.8229    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0701    4.4104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7845    4.8229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0734    3.1729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0734    2.3479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7878    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5023    2.3479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2869    2.0930    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7718    2.7604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2869    3.4279    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5023    3.1729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7878    3.5854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
  6 12  1  0  0  0  0
 12 13  2  0  0  0  0
  3 13  1  0  0  0  0
  9 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 17 21  1  0  0  0  0
 21 22  2  0  0  0  0
 14 22  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0056497

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC=C2C(=O)C(=COC2=C1)C1=CC=C2OCOC2=C1

> <INCHI_IDENTIFIER>
InChI=1S/C17H12O5/c1-19-11-3-4-12-15(7-11)20-8-13(17(12)18)10-2-5-14-16(6-10)22-9-21-14/h2-8H,9H2,1H3

> <INCHI_KEY>
PCCZMNIBWCKFBC-UHFFFAOYSA-N

> <FORMULA>
C17H12O5

> <MOLECULAR_WEIGHT>
296.278

> <EXACT_MASS>
296.068473486

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
34

> <JCHEM_AVERAGE_POLARIZABILITY>
30.353747140522884

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3-(2H-1,3-benzodioxol-5-yl)-7-methoxy-4H-chromen-4-one

> <ALOGPS_LOGP>
2.68

> <JCHEM_LOGP>
2.803130556666667

> <ALOGPS_LOGS>
-3.98

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.436190014859771

> <JCHEM_POLAR_SURFACE_AREA>
53.99000000000001

> <JCHEM_REFRACTIVITY>
77.97030000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.10e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
pseudobaptigenin methyl ether

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 24-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-APR-15         0                                  
HETATM    1  C   UNK     0       7.865  10.543   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       7.865   9.003   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       6.531   8.233   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.531   6.693   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       5.198   5.923   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.864   6.693   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.530   5.923   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       2.530   4.383   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       1.197   6.693   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.197   8.233   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       2.530   9.003   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       3.864   8.233   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.198   9.003   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -0.137   5.923   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.137   4.383   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -1.471   3.613   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -2.804   4.383   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      -4.269   3.907   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0      -5.174   5.153   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      -4.269   6.399   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      -2.804   5.923   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -1.471   6.693   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   13                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   12                                                  
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10   14                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11    6   13                                                  
CONECT   13   12    3                                                       
CONECT   14    9   15   22                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   21                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   17   22                                                  
CONECT   22   21   14                                                       
MASTER        0    0    0    0    0    0    0    0   22    0   50    0
END

View in JSmol

Synonyms

Value	Source
7-Methoxy-baptigenin	ChEMBL

Chemical Formula

C₁₇H₁₂O₅

Average Mass

296.2780 Da

Monoisotopic Mass

296.06847 Da

IUPAC Name

3-(2H-1,3-benzodioxol-5-yl)-7-methoxy-4H-chromen-4-one

Traditional Name

pseudobaptigenin methyl ether

CAS Registry Number

Not Available

SMILES

COC1=CC=C2C(=O)C(=COC2=C1)C1=CC=C2OCOC2=C1

InChI Identifier

InChI=1S/C17H12O5/c1-19-11-3-4-12-15(7-11)20-8-13(17(12)18)10-2-5-14-16(6-10)22-9-21-14/h2-8H,9H2,1H3

InChI Key

PCCZMNIBWCKFBC-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Ateleia herbert-smithii	Plant	KNApSAcK
Calopogonium mucunoides	Plant	KNApSAcK
Styphnolobium japonicum	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 7-o-methylisoflavones. These are isoflavones with methoxy groups attached to the C7 atom of the isoflavone backbone.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Isoflavonoids

Sub Class

O-methylated isoflavonoids

Direct Parent

7-O-methylisoflavones

Alternative Parents

Substituents

7-o-methylisoflavone
Isoflavone
Chromone
Benzopyran
1-benzopyran
Benzodioxole
Anisole
Alkyl aryl ether
Pyranone
Benzenoid
Pyran
Heteroaromatic compound
Acetal
Oxacycle
Organoheterocyclic compound
Ether
Organic oxygen compound
Organic oxide
Organooxygen compound
Hydrocarbon derivative
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Isoflavonoids (LMPK12050058 )

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.68	ALOGPS
logP	2.8	ChemAxon
logS	-4	ALOGPS
pKa (Strongest Basic)	-4.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	53.99 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	77.97 m³·mol⁻¹	ChemAxon
Polarizability	30.35 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for 7-Methoxy-3',4'-methylenedioxyisoflavone (NP0056497)

MOL for NP0056497 (7-Methoxy-3',4'-methylenedioxyisoflavone)

3D MOL for NP0056497 (7-Methoxy-3',4'-methylenedioxyisoflavone)

3D SDF for NP0056497 (7-Methoxy-3',4'-methylenedioxyisoflavone)

3D-SDF for NP0056497 (7-Methoxy-3',4'-methylenedioxyisoflavone)

PDB for NP0056497 (7-Methoxy-3',4'-methylenedioxyisoflavone)

3D PDB for NP0056497 (7-Methoxy-3',4'-methylenedioxyisoflavone)

SMILES for NP0056497 (7-Methoxy-3',4'-methylenedioxyisoflavone)

INCHI for NP0056497 (7-Methoxy-3',4'-methylenedioxyisoflavone)

Structure for NP0056497 (7-Methoxy-3',4'-methylenedioxyisoflavone)

3D Structure for NP0056497 (7-Methoxy-3',4'-methylenedioxyisoflavone)