NP-MRD: Showing NP-Card for (+)-Mopanol (NP0056265)

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Record Information

Version

2.0

Created at

2022-04-28 02:05:28 UTC

Updated at

2022-04-28 02:05:28 UTC

NP-MRD ID

NP0056265

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(+)-Mopanol

Description

(+)-Mopanol is found in Colophospermum mopane , Hymenaea verrucosa, Lysidice rhodostegia, Peltogyne catingae, Peltogyne confertiflora, Peltogyne porphyrocardia, Peltogyne venosa and Trachylobium verrucosum.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 36 39  0  0  0  0  0  0  0  0999 V2000
    5.0255    2.3359    0.4710 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0438    1.3895    0.1515 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1598    0.5328   -0.9151 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1693   -0.4057   -1.2186 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0430   -0.4735   -0.4242 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9343    0.3822    0.6358 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9181    1.3137    0.9365 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8135    0.3149    1.4267 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2920   -0.4652    1.1303 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4102    0.3030    0.5220 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3894    1.6703    0.3624 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4834    2.2859   -0.2101 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5509    1.5047   -0.5976 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6644    2.0771   -1.1734 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5813    0.1186   -0.4401 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6745   -0.6233   -0.8437 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5043   -0.4756    0.1217 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3362   -1.9264    0.3718 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1291   -2.2407   -0.2999 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0201   -1.6707    0.3115 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0200   -1.4628   -0.7608 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6760   -2.6785   -1.0675 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7508    2.0137    1.1121 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0339    0.5798   -1.5381 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3415   -1.0410   -2.0764 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7797    1.9621    1.7830 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7021   -0.8215    2.1236 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5235    2.2431    0.6843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5339    3.3540   -0.3651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6810    3.0753   -1.3044 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6838   -1.6125   -0.7234 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0958   -2.5727   -0.0479 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1221   -2.1188    1.4442 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3985   -2.4893    0.9724 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5460   -1.1427   -1.7228 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7244   -3.2356   -0.2573 H   0  0  0  0  0  0  0  0  0  0  0  0
 22 21  1  0
 21 20  1  0
 20 19  1  0
 19 18  1  0
 18 17  1  0
 17 10  2  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
 15 16  1  0
 10  9  1  0
  9  8  1  0
  8  6  1  0
  6  5  2  0
  5  4  1  0
  4  3  2  0
  3  2  1  0
  2  1  1  0
  2  7  2  0
  5 21  1  0
  9 20  1  0
  7  6  1  0
 15 17  1  0
 22 36  1  0
 21 35  1  6
 20 34  1  1
 18 32  1  0
 18 33  1  0
 11 28  1  0
 12 29  1  0
 14 30  1  0
 16 31  1  0
  9 27  1  1
  4 25  1  0
  3 24  1  0
  1 23  1  0
  7 26  1  0
M  END


  Mrv1652304282204052D          

 22 25  0  0  1  0            999 V2000
    3.6850    0.5684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9550   -0.2111    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4149   -0.8348    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6048   -0.6789    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3347    0.1007    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8748    0.7243    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5246    0.2566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9845   -0.3671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2546   -1.1466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0647   -1.3025    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1744   -0.2111    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0957    0.5684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4444    1.1921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2546    1.0361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9058    0.7243    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3657   -0.8348    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6850   -1.6143    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7651   -0.3671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3052    0.2566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0352    1.0361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2251    1.1921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5753    1.6598    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  6  0  0  0
  1  6  1  0  0  0  0
  5  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  4 10  1  6  0  0  0
  8 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
  7 14  1  0  0  0  0
 12 15  1  0  0  0  0
 11 16  1  0  0  0  0
  3 17  1  1  0  0  0
  2 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
  1 21  1  0  0  0  0
 20 22  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0056265

> <DATABASE_NAME>
NP-MRD

> <SMILES>
O[C@H]1[C@@H]2OCC3=C(C=CC(O)=C3O)[C@@H]2OC2=C1C=CC(O)=C2

> <INCHI_IDENTIFIER>
InChI=1S/C16H14O6/c17-7-1-2-9-12(5-7)22-15-8-3-4-11(18)13(19)10(8)6-21-16(15)14(9)20/h1-5,14-20H,6H2/t14-,15+,16+/m1/s1

> <INCHI_KEY>
AQPFFYOIRKEBDI-PMPSAXMXSA-N

> <FORMULA>
C16H14O6

> <MOLECULAR_WEIGHT>
302.282

> <EXACT_MASS>
302.079038171

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
36

> <JCHEM_AVERAGE_POLARIZABILITY>
30.050307542427753

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(5aS,11aS,12R)-5a,10,11a,12-tetrahydro-5,11-dioxatetraphene-3,8,9,12-tetrol

> <ALOGPS_LOGP>
0.96

> <JCHEM_LOGP>
1.5740299949999996

> <ALOGPS_LOGS>
-2.44

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
9.522304384837527

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.782594458022198

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6039488206913033

> <JCHEM_POLAR_SURFACE_AREA>
99.38000000000001

> <JCHEM_REFRACTIVITY>
76.53210000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.10e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(5aS,11aS,12R)-5a,10,11a,12-tetrahydro-5,11-dioxatetraphene-3,8,9,12-tetrol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       6.879   1.061   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.383  -0.394   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.375  -1.558   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.862  -1.267   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.358   0.188   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       5.366   1.352   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       2.846   0.479   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.838  -0.685   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.342  -2.140   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       3.854  -2.431   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       0.326  -0.394   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -0.179   1.061   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.830   2.225   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.342   1.934   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      -1.691   1.352   0.000  0.00  0.00           O+0
HETATM   16  O   UNK     0      -0.683  -1.558   0.000  0.00  0.00           O+0
HETATM   17  O   UNK     0       6.879  -3.013   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       8.895  -0.685   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       9.903   0.479   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       9.399   1.934   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       7.887   2.225   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      10.407   3.098   0.000  0.00  0.00           O+0
CONECT    1    2    6   21                                                  
CONECT    2    1    3   18                                                  
CONECT    3    2    4   17                                                  
CONECT    4    3    5   10                                                  
CONECT    5    4    6    7                                                  
CONECT    6    5    1                                                       
CONECT    7    5    8   14                                                  
CONECT    8    7    9   11                                                  
CONECT    9    8   10                                                       
CONECT   10    9    4                                                       
CONECT   11    8   12   16                                                  
CONECT   12   11   13   15                                                  
CONECT   13   12   14                                                       
CONECT   14   13    7                                                       
CONECT   15   12                                                            
CONECT   16   11                                                            
CONECT   17    3                                                            
CONECT   18    2   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   22                                                  
CONECT   21   20    1                                                       
CONECT   22   20                                                            
MASTER        0    0    0    0    0    0    0    0   22    0   50    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₆H₁₄O₆

Average Mass

302.2820 Da

Monoisotopic Mass

302.07904 Da

IUPAC Name

(5aS,11aS,12R)-5a,10,11a,12-tetrahydro-5,11-dioxatetraphene-3,8,9,12-tetrol

Traditional Name

(5aS,11aS,12R)-5a,10,11a,12-tetrahydro-5,11-dioxatetraphene-3,8,9,12-tetrol

CAS Registry Number

Not Available

SMILES

O[C@H]1[C@@H]2OCC3=C(C=CC(O)=C3O)[C@@H]2OC2=C1C=CC(O)=C2

InChI Identifier

InChI=1S/C16H14O6/c17-7-1-2-9-12(5-7)22-15-8-3-4-11(18)13(19)10(8)6-21-16(15)14(9)20/h1-5,14-20H,6H2/t14-,15+,16+/m1/s1

InChI Key

AQPFFYOIRKEBDI-PMPSAXMXSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Colophospermum mopane	Plant	KNApSAcK
Hymenaea verrucosa	Plant	KNApSAcK
Lysidice rhodostegia	Plant	KNApSAcK
Peltogyne catingae	Plant	KNApSAcK
Peltogyne confertiflora	Plant	KNApSAcK
Peltogyne porphyrocardia	Plant	KNApSAcK
Peltogyne venosa	Plant	KNApSAcK
Trachylobium verrucosum	Plant	KNApSAcK

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.96	ALOGPS
logP	1.57	ChemAxon
logS	-2.4	ALOGPS
pKa (Strongest Acidic)	8.78	ChemAxon
pKa (Strongest Basic)	-3.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	99.38 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	76.53 m³·mol⁻¹	ChemAxon
Polarizability	30.05 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Not Available

Showing NP-Card for (+)-Mopanol (NP0056265)

MOL for NP0056265 ((+)-Mopanol)

3D MOL for NP0056265 ((+)-Mopanol)

3D SDF for NP0056265 ((+)-Mopanol)

3D-SDF for NP0056265 ((+)-Mopanol)

PDB for NP0056265 ((+)-Mopanol)

3D PDB for NP0056265 ((+)-Mopanol)

SMILES for NP0056265 ((+)-Mopanol)

INCHI for NP0056265 ((+)-Mopanol)

Structure for NP0056265 ((+)-Mopanol)

3D Structure for NP0056265 ((+)-Mopanol)