NP-MRD: Showing NP-Card for Glabrachromene II (NP0054733)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-04-28 00:59:34 UTC

Updated at

2022-04-28 00:59:34 UTC

NP-MRD ID

NP0054733

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Glabrachromene II

Description

Glabrachromene ii belongs to the class of organic compounds known as 2'-hydroxychalcones. These are organic compounds containing chalcone skeleton that carries a hydroxyl group at the 2'-position. Thus, glabrachromene II is considered to be a flavonoid. Glabrachromene II is found in Millettia pinnata. Glabrachromene II was first documented in 2015 (PMID: 25466192). Based on a literature review very few articles have been published on Glabrachromene ii.

Structure

MOL 3D MOL SDF PDB SMILES InChI

  Mrv1652304282202592D          

 26 29  0  0  0  0            999 V2000
    4.0668   -8.9479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812   -8.5354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812   -7.7104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0668   -7.2979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523   -7.7104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523   -8.5354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0668   -6.4729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812   -6.0604    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523   -6.0604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378   -6.4729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233   -6.0604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2089   -6.4729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4944   -6.0604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4944   -5.2354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2089   -4.8229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233   -5.2354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2902   -4.9805    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7751   -5.6479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2902   -6.3154    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4957   -7.2979    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4957   -8.9479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4957   -9.7729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812  -10.1854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0668   -9.7729    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1685  -10.9139    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3939  -10.9139    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  4  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 11 16  1  0  0  0  0
 14 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 13 19  1  0  0  0  0
  3 20  1  0  0  0  0
  2 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
  1 24  1  0  0  0  0
 23 25  1  0  0  0  0
 23 26  1  0  0  0  0
M  END

     RDKit          3D

 44 47  0  0  0  0  0  0  0  0999 V2000
   -6.4838    1.2091   -1.2832 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6794    0.7541   -0.0617 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5187    1.1592    1.1392 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5664   -0.7121   -0.1301 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4201   -1.3575   -0.1316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1666   -0.6239   -0.0632 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2179    0.7334    0.0015 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0336    1.4469    0.0671 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8551    0.7575    0.0643 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7487   -0.6281   -0.0003 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5296   -1.2978    0.0004 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5983   -2.5380   -0.0581 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7804   -0.5468    0.0696 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9492   -1.1823    0.0692 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2191   -0.4997    0.1355 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3315    0.8608    0.2047 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5671    1.5027    0.2681 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7110    0.7734    0.2625 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6478   -0.5976    0.1941 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4230   -1.2132    0.1322 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9521   -1.0751    0.2049 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.8102    0.0329    0.0065 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0445    1.1840    0.3173 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9500   -1.3318   -0.0659 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0206   -2.6801   -0.1334 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4475    1.3853    0.0011 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5341    0.8936   -1.0839 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3844    2.2823   -1.4700 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1579    0.6562   -2.1896 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9749    2.1414    0.8971 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3223    0.4127    1.2662 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8637    1.2446    2.0386 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4748   -1.3468   -0.1847 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3608   -2.4407   -0.1828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0597    2.5237    0.1189 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0813    1.3074    0.1155 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8165    0.5249    0.1227 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9013   -2.2877    0.0141 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4630    1.5089    0.2135 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5580    2.5950    0.3211 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4003   -2.2931    0.0791 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.1306    0.1049   -1.0480 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6933    0.0297    0.6481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3671   -3.3724   -0.1500 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2 26  1  0
 26  7  1  0
  7  6  2  0
  6  5  1  0
  5  4  2  0
  6 24  1  0
 24 25  1  0
 24 10  2  0
 10  9  1  0
  9  8  2  0
 10 11  1  0
 11 12  2  0
 11 13  1  0
 13 14  2  0
 14 15  1  0
 15 20  2  0
 20 19  1  0
 19 18  2  0
 18 23  1  0
 23 22  1  0
 22 21  1  0
 18 17  1  0
 17 16  2  0
  4  2  1  0
 16 15  1  0
  8  7  1  0
 21 19  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  3 30  1  0
  3 31  1  0
  3 32  1  0
  5 34  1  0
  4 33  1  0
 25 44  1  0
  9 36  1  0
  8 35  1  0
 13 37  1  0
 14 38  1  0
 20 41  1  0
 22 42  1  0
 22 43  1  0
 17 40  1  0
 16 39  1  0
M  END

  Mrv1652304282202592D          

 26 29  0  0  0  0            999 V2000
    4.0668   -8.9479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812   -8.5354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812   -7.7104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0668   -7.2979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523   -7.7104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523   -8.5354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0668   -6.4729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812   -6.0604    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523   -6.0604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378   -6.4729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233   -6.0604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2089   -6.4729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4944   -6.0604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4944   -5.2354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2089   -4.8229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233   -5.2354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2902   -4.9805    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7751   -5.6479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2902   -6.3154    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4957   -7.2979    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4957   -8.9479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4957   -9.7729    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812  -10.1854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0668   -9.7729    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1685  -10.9139    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3939  -10.9139    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  4  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 11 16  1  0  0  0  0
 14 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 13 19  1  0  0  0  0
  3 20  1  0  0  0  0
  2 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
  1 24  1  0  0  0  0
 23 25  1  0  0  0  0
 23 26  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0054733

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1(C)OC2=C(C=C1)C(O)=C(C=C2)C(=O)\C=C\C1=CC2=C(OCO2)C=C1

> <INCHI_IDENTIFIER>
InChI=1S/C21H18O5/c1-21(2)10-9-15-17(26-21)8-5-14(20(15)23)16(22)6-3-13-4-7-18-19(11-13)25-12-24-18/h3-11,23H,12H2,1-2H3/b6-3+

> <INCHI_KEY>
WKEIAFLNVZWDKU-ZZXKWVIFSA-N

> <FORMULA>
C21H18O5

> <MOLECULAR_WEIGHT>
350.37

> <EXACT_MASS>
350.11542368

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
44

> <JCHEM_AVERAGE_POLARIZABILITY>
37.886868382548045

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2E)-3-(2H-1,3-benzodioxol-5-yl)-1-(5-hydroxy-2,2-dimethyl-2H-chromen-6-yl)prop-2-en-1-one

> <ALOGPS_LOGP>
3.99

> <JCHEM_LOGP>
4.760616857

> <ALOGPS_LOGS>
-4.88

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
17.38457367264475

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.056666282095966

> <JCHEM_PKA_STRONGEST_BASIC>
-4.5223758267161935

> <JCHEM_POLAR_SURFACE_AREA>
64.99000000000001

> <JCHEM_REFRACTIVITY>
99.01820000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.67e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
glabrachromene II

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       7.591 -16.703   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       8.925 -15.933   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       8.925 -14.393   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       7.591 -13.623   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       6.258 -14.393   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.258 -15.933   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       7.591 -12.083   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       8.925 -11.313   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       6.258 -11.313   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.924 -12.083   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.590 -11.313   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.257 -12.083   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.923 -11.313   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.923  -9.773   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.257  -9.003   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.590  -9.773   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      -0.542  -9.297   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      -1.447 -10.543   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      -0.542 -11.789   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0      10.259 -13.623   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      10.259 -16.703   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      10.259 -18.243   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       8.925 -19.013   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       7.591 -18.243   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       9.648 -20.373   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       8.202 -20.373   0.000  0.00  0.00           C+0
CONECT    1    2    6   24                                                  
CONECT    2    1    3   21                                                  
CONECT    3    2    4   20                                                  
CONECT    4    3    5    7                                                  
CONECT    5    4    6                                                       
CONECT    6    5    1                                                       
CONECT    7    4    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   16                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   19                                                  
CONECT   14   13   15   17                                                  
CONECT   15   14   16                                                       
CONECT   16   15   11                                                       
CONECT   17   14   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   13                                                       
CONECT   20    3                                                            
CONECT   21    2   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   25   26                                             
CONECT   24   23    1                                                       
CONECT   25   23                                                            
CONECT   26   23                                                            
MASTER        0    0    0    0    0    0    0    0   26    0   58    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₁H₁₈O₅

Average Mass

350.3700 Da

Monoisotopic Mass

350.11542 Da

IUPAC Name

(2E)-3-(2H-1,3-benzodioxol-5-yl)-1-(5-hydroxy-2,2-dimethyl-2H-chromen-6-yl)prop-2-en-1-one

Traditional Name

glabrachromene II

CAS Registry Number

Not Available

SMILES

CC1(C)OC2=C(C=C1)C(O)=C(C=C2)C(=O)\C=C\C1=CC2=C(OCO2)C=C1

InChI Identifier

InChI=1S/C21H18O5/c1-21(2)10-9-15-17(26-21)8-5-14(20(15)23)16(22)6-3-13-4-7-18-19(11-13)25-12-24-18/h3-11,23H,12H2,1-2H3/b6-3+

InChI Key

WKEIAFLNVZWDKU-ZZXKWVIFSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Pongamia pinnata	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 2'-hydroxychalcones. These are organic compounds containing chalcone skeleton that carries a hydroxyl group at the 2'-position.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Linear 1,3-diarylpropanoids

Sub Class

Chalcones and dihydrochalcones

Direct Parent

2'-Hydroxychalcones

Alternative Parents

Substituents

2'-hydroxychalcone
Cinnamic acid or derivatives
2,2-dimethyl-1-benzopyran
Benzopyran
1-benzopyran
Benzodioxole
Aryl ketone
Styrene
Alkyl aryl ether
1-hydroxy-4-unsubstituted benzenoid
Benzenoid
Vinylogous acid
Alpha,beta-unsaturated ketone
Acryloyl-group
Enone
Ketone
Ether
Acetal
Organoheterocyclic compound
Oxacycle
Organooxygen compound
Organic oxygen compound
Organic oxide
Aldehyde
Hydrocarbon derivative
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Chalcones and dihydrochalcones (LMPK12120108 )

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.99	ALOGPS
logP	4.76	ChemAxon
logS	-4.9	ALOGPS
pKa (Strongest Acidic)	7.06	ChemAxon
pKa (Strongest Basic)	-4.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	64.99 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	99.02 m³·mol⁻¹	ChemAxon
Polarizability	37.89 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00007034

Chemspider ID

4946773

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

6442711

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Li J, Jiang Z, Li X, Hou Y, Liu F, Li N, Liu X, Yang L: Natural therapeutic agents for neurodegenerative diseases from a traditional herbal medicine Pongamia pinnata (L.) Pierre. Bioorg Med Chem Lett. 2015 Jan 1;25(1):53-8. doi: 10.1016/j.bmcl.2014.11.015. Epub 2014 Nov 11. [PubMed:25466192 ]

Showing NP-Card for Glabrachromene II (NP0054733)

MOL for NP0054733 (Glabrachromene II)

3D MOL for NP0054733 (Glabrachromene II)

3D SDF for NP0054733 (Glabrachromene II)

3D-SDF for NP0054733 (Glabrachromene II)

PDB for NP0054733 (Glabrachromene II)

3D PDB for NP0054733 (Glabrachromene II)

SMILES for NP0054733 (Glabrachromene II)

INCHI for NP0054733 (Glabrachromene II)

Structure for NP0054733 (Glabrachromene II)

3D Structure for NP0054733 (Glabrachromene II)